RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 NCEH1Q6PIU2 408 aa21.76■■□□□ 1.07
SQSTM1-210ENST00000506042 PRPF39Q86UA1 669 aaKnown RBP21.76■■□□□ 1.07
SQSTM1-210ENST00000506042 MMAAQ8IVH4 418 aaKnown RBP21.76■■□□□ 1.07
SQSTM1-210ENST00000506042 HNRNPLLQ8WVV9 542 aaKnown RBP21.76■■□□□ 1.07
SQSTM1-210ENST00000506042 KDM4CQ9H3R0 1056 aa21.76■■□□□ 1.07
SQSTM1-210ENST00000506042 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.76■■□□□ 1.07
SQSTM1-210ENST00000506042 TOR4AQ9NXH8 423 aa21.76■■□□□ 1.07
SQSTM1-210ENST00000506042 BTBD3Q9Y2F9 522 aa21.76■■□□□ 1.07
SQSTM1-210ENST00000506042 ITIH6Q6UXX5 1313 aa21.76■■□□□ 1.07
SQSTM1-210ENST00000506042 GOLGA6L7A0A1B0GV03 622 aa21.75■■□□□ 1.07
SQSTM1-210ENST00000506042 PIK3R2O00459 728 aa21.75■■□□□ 1.07
SQSTM1-210ENST00000506042 MID1O15344 667 aa21.75■■□□□ 1.07
SQSTM1-210ENST00000506042 RFPL3O75679 317 aa21.75■■□□□ 1.07
SQSTM1-210ENST00000506042 IL1BP01584 269 aa21.75■■□□□ 1.07
SQSTM1-210ENST00000506042 KRT5P13647 590 aa21.75■■□□□ 1.07
SQSTM1-210ENST00000506042 BRD2P25440 801 aaKnown RBP21.75■■□□□ 1.07
SQSTM1-210ENST00000506042 PSMD8P48556 350 aa21.75■■□□□ 1.07
SQSTM1-210ENST00000506042 SGSHP51688 502 aa21.75■■□□□ 1.07
SQSTM1-210ENST00000506042 CYP4F3Q08477 520 aa21.75■■□□□ 1.07
SQSTM1-210ENST00000506042 OVGP1Q12889 678 aa21.75■■□□□ 1.07
SQSTM1-210ENST00000506042 ENOSF1Q7L5Y1 443 aa21.75■■□□□ 1.07
SQSTM1-210ENST00000506042 LGI2Q8N0V4 545 aa21.75■■□□□ 1.07
SQSTM1-210ENST00000506042 UBR7Q8N806 425 aa21.75■■□□□ 1.07
SQSTM1-210ENST00000506042 OR14C36Q8NHC7 312 aa21.75■■□□□ 1.07
SQSTM1-210ENST00000506042 DQX1Q8TE96 717 aaKnown RBP21.75■■□□□ 1.07
SQSTM1-210ENST00000506042 STK32AQ8WU08 396 aa21.75■■□□□ 1.07
SQSTM1-210ENST00000506042 SERAC1Q96JX3 654 aa21.75■■□□□ 1.07
SQSTM1-210ENST00000506042 CNDP2Q96KP4 475 aaKnown RBP21.75■■□□□ 1.07
SQSTM1-210ENST00000506042 CCDC114Q96M63 670 aa21.75■■□□□ 1.07
SQSTM1-210ENST00000506042 TIGD1Q96MW7 591 aa21.75■■□□□ 1.07
SQSTM1-210ENST00000506042 POPDC2Q9HBU9 364 aa21.75■■□□□ 1.07
SQSTM1-210ENST00000506042 SLC25A13Q9UJS0 675 aa21.75■■□□□ 1.07
SQSTM1-210ENST00000506042 FARP1Q9Y4F1 1045 aaPredicted RBP21.75■■□□□ 1.07
SQSTM1-210ENST00000506042 COL5A1P20908 1838 aaPredicted RBP21.75■■□□□ 1.07
SQSTM1-210ENST00000506042 TMEM131Q92545 1883 aa21.75■■□□□ 1.07
SQSTM1-210ENST00000506042 TBC1D3DA0A087WVF3 549 aa21.74■■□□□ 1.07
SQSTM1-210ENST00000506042 TBC1D3IA0A087WXS9 549 aa21.74■■□□□ 1.07
SQSTM1-210ENST00000506042 TBC1D3EA0A087X179 549 aa21.74■■□□□ 1.07
SQSTM1-210ENST00000506042 TBC1D3KA0A087X1G2 549 aa21.74■■□□□ 1.07
SQSTM1-210ENST00000506042 TBC1D3FA6NER0 549 aaPredicted RBP21.74■■□□□ 1.07
SQSTM1-210ENST00000506042 TBC1D3LB9A6J9 549 aa21.74■■□□□ 1.07
SQSTM1-210ENST00000506042 C1QTNF3-AMACRE9PGA6 284 aa21.74■■□□□ 1.07
SQSTM1-210ENST00000506042 RRP8O43159 456 aaKnown RBP21.74■■□□□ 1.07
SQSTM1-210ENST00000506042 SLC7A4O43246 635 aa21.74■■□□□ 1.07
SQSTM1-210ENST00000506042 IGHV4-34P06331 123 aa21.74■■□□□ 1.07
SQSTM1-210ENST00000506042 TBC1D3HP0C7X1 549 aa21.74■■□□□ 1.07
SQSTM1-210ENST00000506042 ABCG1P45844 678 aa21.74■■□□□ 1.07
SQSTM1-210ENST00000506042 RPS24P62847 133 aaKnown RBP21.74■■□□□ 1.07
SQSTM1-210ENST00000506042 ILKQ13418 452 aa21.74■■□□□ 1.07
SQSTM1-210ENST00000506042 TBC1D3GQ6DHY5 549 aa21.74■■□□□ 1.07
SQSTM1-210ENST00000506042 TBC1D3CQ6IPX1 549 aa21.74■■□□□ 1.07
SQSTM1-210ENST00000506042 FOXR2Q6PJQ5 311 aa21.74■■□□□ 1.07
SQSTM1-210ENST00000506042 DHRS13Q6UX07 377 aa21.74■■□□□ 1.07
SQSTM1-210ENST00000506042 TBC1D3Q8IZP1 549 aaPredicted RBP21.74■■□□□ 1.07
SQSTM1-210ENST00000506042 FMR1NBQ8N0W7 255 aaPredicted RBP21.74■■□□□ 1.07
SQSTM1-210ENST00000506042 WFDC5Q8TCV5 224 aa21.74■■□□□ 1.07
SQSTM1-210ENST00000506042 OR8D1Q8WZ84 308 aa21.74■■□□□ 1.07
SQSTM1-210ENST00000506042 TFAP2BQ92481 460 aa21.74■■□□□ 1.07
SQSTM1-210ENST00000506042 FCRL2Q96LA5 508 aaPredicted RBP21.74■■□□□ 1.07
SQSTM1-210ENST00000506042 SLC6A18Q96N87 628 aa21.74■■□□□ 1.07
SQSTM1-210ENST00000506042 NOX5Q96PH1 765 aa21.74■■□□□ 1.07
SQSTM1-210ENST00000506042 SPAG5Q96R06 1193 aa21.74■■□□□ 1.07
SQSTM1-210ENST00000506042 NEUROG2Q9H2A3 272 aa21.74■■□□□ 1.07
SQSTM1-210ENST00000506042 DMTF1Q9Y222 760 aa21.74■■□□□ 1.07
SQSTM1-210ENST00000506042 PKD1L2Q7Z442 2459 aa21.74■■□□□ 1.07
SQSTM1-210ENST00000506042 AKAP13Q12802 2813 aa21.74■■□□□ 1.07
SQSTM1-210ENST00000506042 YWHAZP63104 245 aaKnown RBP21.73■■□□□ 1.07
SQSTM1-210ENST00000506042 IL9RQ01113 521 aa21.73■■□□□ 1.07
SQSTM1-210ENST00000506042 DCAF6Q58WW2 860 aa21.73■■□□□ 1.07
SQSTM1-210ENST00000506042 C9orf64Q5T6V5 341 aa21.73■■□□□ 1.07
SQSTM1-210ENST00000506042 BAP1Q92560 729 aa21.73■■□□□ 1.07
SQSTM1-210ENST00000506042 LRIG1Q96JA1 1093 aa21.73■■□□□ 1.07
SQSTM1-210ENST00000506042 PRICKLE1Q96MT3 831 aaPredicted RBP21.73■■□□□ 1.07
SQSTM1-210ENST00000506042 THAP9Q9H5L6 903 aa21.73■■□□□ 1.07
SQSTM1-210ENST00000506042 ERVMER34-1Q9H9K5 563 aa21.73■■□□□ 1.07
SQSTM1-210ENST00000506042 EVA1BQ9NVM1 165 aa21.73■■□□□ 1.07
SQSTM1-210ENST00000506042 PLXNB3Q9ULL4 1909 aa21.72■■□□□ 1.07
SQSTM1-210ENST00000506042 A0A1B0GVM2 712 aa21.72■■□□□ 1.07
SQSTM1-210ENST00000506042 TRIM49BA6NDI0 452 aa21.72■■□□□ 1.07
SQSTM1-210ENST00000506042 TCAF2A6NFQ2 919 aa21.72■■□□□ 1.07
SQSTM1-210ENST00000506042 KCNK3O14649 394 aa21.72■■□□□ 1.07
SQSTM1-210ENST00000506042 ZNF18P17022 549 aa21.72■■□□□ 1.07
SQSTM1-210ENST00000506042 TACR2P21452 398 aa21.72■■□□□ 1.07
SQSTM1-210ENST00000506042 CDK17Q00537 523 aa21.72■■□□□ 1.07
SQSTM1-210ENST00000506042 NAPEPLDQ6IQ20 393 aa21.72■■□□□ 1.07
SQSTM1-210ENST00000506042 IQCHQ86VS3 1027 aa21.72■■□□□ 1.07
SQSTM1-210ENST00000506042 SLC39A13Q96H72 371 aa21.72■■□□□ 1.07
SQSTM1-210ENST00000506042 NUCKS1Q9H1E3 243 aaKnown RBP21.72■■□□□ 1.07
SQSTM1-210ENST00000506042 TMEM51Q9NW97 253 aa21.72■■□□□ 1.07
SQSTM1-210ENST00000506042 ZDHHC9Q9Y397 364 aa21.72■■□□□ 1.07
SQSTM1-210ENST00000506042 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.72■■□□□ 1.07
SQSTM1-210ENST00000506042 A0A087WV48 116 aa21.71■■□□□ 1.07
SQSTM1-210ENST00000506042 HOXB3P14651 431 aaPredicted RBP21.71■■□□□ 1.07
SQSTM1-210ENST00000506042 CCR1P32246 355 aa21.71■■□□□ 1.07
SQSTM1-210ENST00000506042 ADPRHP54922 357 aa21.71■■□□□ 1.07
SQSTM1-210ENST00000506042 STAT4Q14765 748 aa21.71■■□□□ 1.07
SQSTM1-210ENST00000506042 SETMARQ53H47 684 aaPredicted RBP21.71■■□□□ 1.07
SQSTM1-210ENST00000506042 NADSYN1Q6IA69 706 aa21.71■■□□□ 1.07
SQSTM1-210ENST00000506042 LAYNQ6UX15 382 aa21.71■■□□□ 1.07
SQSTM1-210ENST00000506042 RRAGAQ7L523 313 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms