RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 CBFA2T3O75081 653 aa12.46□□□□□ -0.41
PDLIM7-214ENST00000505746 FTH1P19P0C7X4 201 aa12.46□□□□□ -0.41
PDLIM7-214ENST00000505746 CCR1P32246 355 aa12.46□□□□□ -0.41
PDLIM7-214ENST00000505746 KRT9P35527 623 aa12.46□□□□□ -0.41
PDLIM7-214ENST00000505746 SULT2A1Q06520 285 aa12.46□□□□□ -0.41
PDLIM7-214ENST00000505746 EIF4EBP2Q13542 120 aaPredicted RBP12.46□□□□□ -0.41
PDLIM7-214ENST00000505746 TAF5Q15542 800 aa12.46□□□□□ -0.41
PDLIM7-214ENST00000505746 CST6Q15828 149 aa12.46□□□□□ -0.41
PDLIM7-214ENST00000505746 KIF19Q2TAC6 998 aa12.46□□□□□ -0.41
PDLIM7-214ENST00000505746 RABGAP1LQ5R372 815 aa12.46□□□□□ -0.41
PDLIM7-214ENST00000505746 C9orf64Q5T6V5 341 aa12.46□□□□□ -0.41
PDLIM7-214ENST00000505746 KIAA0895LQ68EN5 471 aa12.46□□□□□ -0.41
PDLIM7-214ENST00000505746 DBX2Q6ZNG2 339 aa12.46□□□□□ -0.41
PDLIM7-214ENST00000505746 ADAT2Q7Z6V5 191 aaKnown RBP12.46□□□□□ -0.41
PDLIM7-214ENST00000505746 DEFB106AQ8N104 65 aa12.46□□□□□ -0.41
PDLIM7-214ENST00000505746 WDTC1Q8N5D0 677 aa12.46□□□□□ -0.41
PDLIM7-214ENST00000505746 RHBDD1Q8TEB9 315 aa12.46□□□□□ -0.41
PDLIM7-214ENST00000505746 ADAMTS14Q8WXS8 1223 aa12.46□□□□□ -0.41
PDLIM7-214ENST00000505746 SKA1Q96BD8 255 aa12.46□□□□□ -0.41
PDLIM7-214ENST00000505746 SLC2A13Q96QE2 648 aa12.46□□□□□ -0.41
PDLIM7-214ENST00000505746 CDC6Q99741 560 aa12.46□□□□□ -0.41
PDLIM7-214ENST00000505746 OMDQ99983 421 aa12.46□□□□□ -0.41
PDLIM7-214ENST00000505746 DDIT4Q9NX09 232 aa12.46□□□□□ -0.41
PDLIM7-214ENST00000505746 ANKRD6Q9Y2G4 727 aa12.46□□□□□ -0.41
PDLIM7-214ENST00000505746 FNDC3AQ9Y2H6 1198 aaKnown RBP12.46□□□□□ -0.41
PDLIM7-214ENST00000505746 SNX11Q9Y5W9 270 aa12.46□□□□□ -0.41
PDLIM7-214ENST00000505746 PCDH15Q96QU1 1955 aa12.46□□□□□ -0.41
PDLIM7-214ENST00000505746 KMT2BQ9UMN6 2715 aaPredicted RBP12.46□□□□□ -0.42
PDLIM7-214ENST00000505746 ITIH6Q6UXX5 1313 aa12.45□□□□□ -0.42
PDLIM7-214ENST00000505746 FAM47DPA6NHR8 397 aa12.45□□□□□ -0.42
PDLIM7-214ENST00000505746 LRRC72A6NJI9 287 aa12.45□□□□□ -0.42
PDLIM7-214ENST00000505746 TTC34A8MYJ7 566 aa12.45□□□□□ -0.42
PDLIM7-214ENST00000505746 MID1O15344 667 aa12.45□□□□□ -0.42
PDLIM7-214ENST00000505746 PON1P27169 355 aa12.45□□□□□ -0.42
PDLIM7-214ENST00000505746 SLC8A1P32418 973 aa12.45□□□□□ -0.42
PDLIM7-214ENST00000505746 CTSOP43234 321 aaPredicted RBP12.45□□□□□ -0.42
PDLIM7-214ENST00000505746 GALCP54803 685 aa12.45□□□□□ -0.42
PDLIM7-214ENST00000505746 LRSAM1Q6UWE0 723 aa12.45□□□□□ -0.42
PDLIM7-214ENST00000505746 C11orf57Q6ZUT1 292 aaPredicted RBP12.45□□□□□ -0.42
PDLIM7-214ENST00000505746 MMAAQ8IVH4 418 aaKnown RBP12.45□□□□□ -0.42
PDLIM7-214ENST00000505746 FAM114A1Q8IWE2 563 aa12.45□□□□□ -0.42
PDLIM7-214ENST00000505746 APCDD1Q8J025 514 aa12.45□□□□□ -0.42
PDLIM7-214ENST00000505746 CCAR2Q8N163 923 aaKnown RBP12.45□□□□□ -0.42
PDLIM7-214ENST00000505746 ZCCHC14Q8WYQ9 949 aaKnown RBP12.45□□□□□ -0.42
PDLIM7-214ENST00000505746 IGSF8Q969P0 613 aa12.45□□□□□ -0.42
PDLIM7-214ENST00000505746 CPXM1Q96SM3 734 aa12.45□□□□□ -0.42
PDLIM7-214ENST00000505746 PRMT1Q99873 361 aaKnown RBP12.45□□□□□ -0.42
PDLIM7-214ENST00000505746 SYNCQ9H7C4 482 aa12.45□□□□□ -0.42
PDLIM7-214ENST00000505746 ADAMTS1Q9UHI8 967 aa12.45□□□□□ -0.42
PDLIM7-214ENST00000505746 SLCO3A1Q9UIG8 710 aa12.45□□□□□ -0.42
PDLIM7-214ENST00000505746 DNAJC12Q9UKB3 198 aa12.45□□□□□ -0.42
PDLIM7-214ENST00000505746 FZD4Q9ULV1 537 aa12.45□□□□□ -0.42
PDLIM7-214ENST00000505746 TPX2Q9ULW0 747 aaKnown RBP12.45□□□□□ -0.42
PDLIM7-214ENST00000505746 SYNJ2BP-COX16A0A087WUM0 186 aa12.44□□□□□ -0.42
PDLIM7-214ENST00000505746 A0A1B0GVM2 712 aa12.44□□□□□ -0.42
PDLIM7-214ENST00000505746 A0A1W2PP55 124 aa12.44□□□□□ -0.42
PDLIM7-214ENST00000505746 A0A1W2PPC4 97 aa12.44□□□□□ -0.42
PDLIM7-214ENST00000505746 TCAF2A6NFQ2 919 aa12.44□□□□□ -0.42
PDLIM7-214ENST00000505746 DFNA5O60443 496 aa12.44□□□□□ -0.42
PDLIM7-214ENST00000505746 RNASEH2AO75792 299 aaKnown RBP12.44□□□□□ -0.42
PDLIM7-214ENST00000505746 ADH1BP00325 375 aa12.44□□□□□ -0.42
PDLIM7-214ENST00000505746 IGHV4-34P06331 123 aa12.44□□□□□ -0.42
PDLIM7-214ENST00000505746 PRKCSHP14314 528 aaPredicted RBP12.44□□□□□ -0.42
PDLIM7-214ENST00000505746 GOT1P17174 413 aa12.44□□□□□ -0.42
PDLIM7-214ENST00000505746 C5AR1P21730 350 aa12.44□□□□□ -0.42
PDLIM7-214ENST00000505746 PLK1P53350 603 aa12.44□□□□□ -0.42
PDLIM7-214ENST00000505746 C21orf59P57076 290 aa12.44□□□□□ -0.42
PDLIM7-214ENST00000505746 BPIFB4P59827 614 aa12.44□□□□□ -0.42
PDLIM7-214ENST00000505746 RACK1P63244 317 aaKnown RBP12.44□□□□□ -0.42
PDLIM7-214ENST00000505746 PITX1P78337 314 aaPredicted RBP12.44□□□□□ -0.42
PDLIM7-214ENST00000505746 APBA1Q02410 837 aa12.44□□□□□ -0.42
PDLIM7-214ENST00000505746 MAN2A1Q16706 1144 aa12.44□□□□□ -0.42
PDLIM7-214ENST00000505746 OR6B2Q6IFH4 312 aa12.44□□□□□ -0.42
PDLIM7-214ENST00000505746 SND1Q7KZF4 910 aaKnown RBP eCLIP12.44□□□□□ -0.42
PDLIM7-214ENST00000505746 IRF2BP1Q8IU81 584 aa12.44□□□□□ -0.42
PDLIM7-214ENST00000505746 ZDHHC17Q8IUH5 632 aa12.44□□□□□ -0.42
PDLIM7-214ENST00000505746 PASD1Q8IV76 773 aa12.44□□□□□ -0.42
PDLIM7-214ENST00000505746 PNPLA1Q8N8W4 532 aa12.44□□□□□ -0.42
PDLIM7-214ENST00000505746 OR2T34Q8NGX1 318 aa12.44□□□□□ -0.42
PDLIM7-214ENST00000505746 PTPRN2Q92932 1015 aa12.44□□□□□ -0.42
PDLIM7-214ENST00000505746 RPL10LQ96L21 214 aaKnown RBP12.44□□□□□ -0.42
PDLIM7-214ENST00000505746 RPRD1AQ96P16 312 aaPredicted RBP12.44□□□□□ -0.42
PDLIM7-214ENST00000505746 FAM129BQ96TA1 746 aa12.44□□□□□ -0.42
PDLIM7-214ENST00000505746 ACE2Q9BYF1 805 aaPredicted RBP12.44□□□□□ -0.42
PDLIM7-214ENST00000505746 NEUROG2Q9H2A3 272 aa12.44□□□□□ -0.42
PDLIM7-214ENST00000505746 RRN3Q9NYV6 651 aa12.44□□□□□ -0.42
PDLIM7-214ENST00000505746 COX16Q9P0S2 106 aa12.44□□□□□ -0.42
PDLIM7-214ENST00000505746 SLCO1B1Q9Y6L6 691 aa12.44□□□□□ -0.42
PDLIM7-214ENST00000505746 FOXN3O00409 490 aaPredicted RBP12.43□□□□□ -0.42
PDLIM7-214ENST00000505746 VILLO15195 856 aa12.43□□□□□ -0.42
PDLIM7-214ENST00000505746 PCDHGA12O60330 932 aa12.43□□□□□ -0.42
PDLIM7-214ENST00000505746 GRAP2O75791 330 aa12.43□□□□□ -0.42
PDLIM7-214ENST00000505746 IL1BP01584 269 aa12.43□□□□□ -0.42
PDLIM7-214ENST00000505746 PDGFRAP16234 1089 aa12.43□□□□□ -0.42
PDLIM7-214ENST00000505746 MZF1P28698 734 aaPredicted RBP12.43□□□□□ -0.42
PDLIM7-214ENST00000505746 NOS2P35228 1153 aa12.43□□□□□ -0.42
PDLIM7-214ENST00000505746 GRK6P43250 576 aa12.43□□□□□ -0.42
PDLIM7-214ENST00000505746 PSMD8P48556 350 aa12.43□□□□□ -0.42
PDLIM7-214ENST00000505746 CCT8P50990 548 aa12.43□□□□□ -0.42
PDLIM7-214ENST00000505746 SLC6A3Q01959 620 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms