RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 ZRSR1Q15695 479 aaKnown RBP7.34□□□□□ -1.23
VCAN-206ENST00000505615 ME3Q16798 604 aa7.34□□□□□ -1.23
VCAN-206ENST00000505615 ARL13BQ3SXY8 428 aa7.34□□□□□ -1.23
VCAN-206ENST00000505615 SLFN12LQ6IEE8 588 aa7.34□□□□□ -1.23
VCAN-206ENST00000505615 ANKS1BQ7Z6G8 1248 aa7.34□□□□□ -1.23
VCAN-206ENST00000505615 MYCT1Q8N699 235 aa7.34□□□□□ -1.23
VCAN-206ENST00000505615 ZNF366Q8N895 744 aa7.34□□□□□ -1.23
VCAN-206ENST00000505615 ZDHHC1Q8WTX9 485 aa7.34□□□□□ -1.23
VCAN-206ENST00000505615 UCMAQ8WVF2 138 aa7.34□□□□□ -1.23
VCAN-206ENST00000505615 POMGNT1Q8WZA1 660 aa7.34□□□□□ -1.23
VCAN-206ENST00000505615 PRR11Q96HE9 360 aaPredicted RBP7.34□□□□□ -1.23
VCAN-206ENST00000505615 KCNK16Q96T55 309 aa7.34□□□□□ -1.23
VCAN-206ENST00000505615 FOXP1Q9H334 677 aaPredicted RBP7.34□□□□□ -1.23
VCAN-206ENST00000505615 PARVGQ9HBI0 331 aa7.34□□□□□ -1.23
VCAN-206ENST00000505615 SGK2Q9HBY8 427 aa7.34□□□□□ -1.23
VCAN-206ENST00000505615 ZFP64Q9NPA5 681 aa7.34□□□□□ -1.23
VCAN-206ENST00000505615 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.34□□□□□ -1.23
VCAN-206ENST00000505615 GDF3Q9NR23 364 aa7.34□□□□□ -1.23
VCAN-206ENST00000505615 OSER1Q9NX31 292 aa7.34□□□□□ -1.23
VCAN-206ENST00000505615 TJP2Q9UDY2 1190 aa7.34□□□□□ -1.23
VCAN-206ENST00000505615 LSM7Q9UK45 103 aaKnown RBP7.34□□□□□ -1.23
VCAN-206ENST00000505615 PAXBP1Q9Y5B6 917 aa7.34□□□□□ -1.23
VCAN-206ENST00000505615 UNC13CQ8NB66 2214 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 MTORP42345 2549 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 PMS2P1A4D2B8 440 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 CDRT15L2A8MXV6 281 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 M0R082 166 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 MDM4O15151 490 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 SIGLEC6O43699 453 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 OPA1O60313 960 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 CSO75390 466 aaKnown RBP7.33□□□□□ -1.24
VCAN-206ENST00000505615 FAM13AO94988 1023 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 REC8O95072 547 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 ALBP02768 609 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 KLKB1P03952 638 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 NID1P14543 1247 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 PTPN1P18031 435 aaKnown RBP7.33□□□□□ -1.24
VCAN-206ENST00000505615 ALAS2P22557 587 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 CD38P28907 300 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 PRPHP41219 470 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 ARRB1P49407 418 aaPredicted RBP7.33□□□□□ -1.24
VCAN-206ENST00000505615 ASIC1P78348 528 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 NCEH1Q6PIU2 408 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 XKR5Q6UX68 686 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 SERPINA13PQ6UXR4 307 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 CCDC81Q6ZN84 652 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 PAQR9Q6ZVX9 377 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 HS2ST1Q7LGA3 356 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 FAM35AQ86V20 835 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 GPBP1Q86WP2 473 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 SPATS2Q86XZ4 545 aaKnown RBP7.33□□□□□ -1.24
VCAN-206ENST00000505615 ZMIZ2Q8NF64 920 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 OR5B17Q8NGF7 314 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 ZNF417Q8TAU3 575 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 CACTINQ8WUQ7 758 aaKnown RBP7.33□□□□□ -1.24
VCAN-206ENST00000505615 SAAL1Q96ER3 474 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 HPDLQ96IR7 371 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 DEPDC7Q96QD5 511 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 ZNF587Q96SQ5 575 aaPredicted RBP7.33□□□□□ -1.24
VCAN-206ENST00000505615 FAM213AQ9BRX8 229 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 STRA6Q9BX79 667 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 TMEM245Q9H330 911 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 ST6GALNAC4Q9H4F1 302 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 ERVMER34-1Q9H9K5 563 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 PDE11AQ9HCR9 933 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 BLOC1S4Q9NUP1 217 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 SERGEFQ9UGK8 458 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 PCDHGA11Q9Y5H2 935 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 SDK2Q58EX2 2172 aa7.33□□□□□ -1.24
VCAN-206ENST00000505615 NAV3Q8IVL0 2385 aa7.32□□□□□ -1.24
VCAN-206ENST00000505615 LY6G6EA0A0G2JKS1 128 aa7.32□□□□□ -1.24
VCAN-206ENST00000505615 A0A1B0GVM2 712 aa7.32□□□□□ -1.24
VCAN-206ENST00000505615 FAM229AH3BQW9 127 aa7.32□□□□□ -1.24
VCAN-206ENST00000505615 EPB41L2O43491 1005 aaKnown RBP7.32□□□□□ -1.24
VCAN-206ENST00000505615 TACC1O75410 805 aa7.32□□□□□ -1.24
VCAN-206ENST00000505615 STC2O76061 302 aa7.32□□□□□ -1.24
VCAN-206ENST00000505615 TMEM191BP0C7N4 346 aa7.32□□□□□ -1.24
VCAN-206ENST00000505615 FAM87AP0C7U9 286 aa7.32□□□□□ -1.24
VCAN-206ENST00000505615 GALCP54803 685 aa7.32□□□□□ -1.24
VCAN-206ENST00000505615 ZBTB16Q05516 673 aa7.32□□□□□ -1.24
VCAN-206ENST00000505615 ZNF211Q13398 564 aaPredicted RBP7.32□□□□□ -1.24
VCAN-206ENST00000505615 ESPL1Q14674 2120 aa7.32□□□□□ -1.24
VCAN-206ENST00000505615 CLEC14AQ86T13 490 aa7.32□□□□□ -1.24
VCAN-206ENST00000505615 ZC3H3Q8IXZ2 948 aaKnown RBP7.32□□□□□ -1.24
VCAN-206ENST00000505615 OXR1Q8N573 874 aa7.32□□□□□ -1.24
VCAN-206ENST00000505615 B3GALNT2Q8NCR0 500 aa7.32□□□□□ -1.24
VCAN-206ENST00000505615 EXTL1Q92935 676 aa7.32□□□□□ -1.24
VCAN-206ENST00000505615 SLC46A1Q96NT5 459 aa7.32□□□□□ -1.24
VCAN-206ENST00000505615 SEMA3CQ99985 751 aa7.32□□□□□ -1.24
VCAN-206ENST00000505615 CIPCQ9C0C6 399 aa7.32□□□□□ -1.24
VCAN-206ENST00000505615 NACA2Q9H009 215 aa7.32□□□□□ -1.24
VCAN-206ENST00000505615 FBRSQ9HAH7 460 aa7.32□□□□□ -1.24
VCAN-206ENST00000505615 PRSS16Q9NQE7 514 aa7.32□□□□□ -1.24
VCAN-206ENST00000505615 AASDHPPTQ9NRN7 309 aa7.32□□□□□ -1.24
VCAN-206ENST00000505615 INTS13Q9NVM9 706 aa7.32□□□□□ -1.24
VCAN-206ENST00000505615 RBAKQ9NYW8 714 aaPredicted RBP7.32□□□□□ -1.24
VCAN-206ENST00000505615 SCHIP1Q9P0W5 487 aaPredicted RBP7.32□□□□□ -1.24
VCAN-206ENST00000505615 SATB2Q9UPW6 733 aa7.32□□□□□ -1.24
VCAN-206ENST00000505615 U3KQA8 63 aa7.32□□□□□ -1.24
VCAN-206ENST00000505615 BLACEA4D250 179 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms