RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 PRAMEF26H0Y7S4 382 aa10.27□□□□□ -0.77
NEDD9-210ENST00000505589 MID1O15344 667 aa10.27□□□□□ -0.77
NEDD9-210ENST00000505589 ACSL4O60488 711 aa10.27□□□□□ -0.77
NEDD9-210ENST00000505589 DXOO77932 396 aaKnown RBP10.27□□□□□ -0.77
NEDD9-210ENST00000505589 GP1BAP07359 652 aa10.27□□□□□ -0.77
NEDD9-210ENST00000505589 SETSIPP0DME0 302 aa10.27□□□□□ -0.77
NEDD9-210ENST00000505589 C6P13671 934 aa10.27□□□□□ -0.77
NEDD9-210ENST00000505589 NR2F2P24468 414 aa10.27□□□□□ -0.77
NEDD9-210ENST00000505589 LSSP48449 732 aa10.27□□□□□ -0.77
NEDD9-210ENST00000505589 ECT2LQ008S8 904 aa10.27□□□□□ -0.77
NEDD9-210ENST00000505589 BNIP3Q12983 259 aa10.27□□□□□ -0.77
NEDD9-210ENST00000505589 MTA1Q13330 715 aa10.27□□□□□ -0.77
NEDD9-210ENST00000505589 ADAM9Q13443 819 aa10.27□□□□□ -0.77
NEDD9-210ENST00000505589 CDH18Q13634 790 aa10.27□□□□□ -0.77
NEDD9-210ENST00000505589 ELAVL3Q14576 367 aaKnown RBP10.27□□□□□ -0.77
NEDD9-210ENST00000505589 STILQ15468 1287 aa10.27□□□□□ -0.77
NEDD9-210ENST00000505589 SETMARQ53H47 684 aaPredicted RBP10.27□□□□□ -0.77
NEDD9-210ENST00000505589 SFMBT2Q5VUG0 894 aa10.27□□□□□ -0.77
NEDD9-210ENST00000505589 SHC4Q6S5L8 630 aa10.27□□□□□ -0.77
NEDD9-210ENST00000505589 LAYNQ6UX15 382 aa10.27□□□□□ -0.77
NEDD9-210ENST00000505589 FBXL13Q8NEE6 735 aa10.27□□□□□ -0.77
NEDD9-210ENST00000505589 TPCN2Q8NHX9 752 aa10.27□□□□□ -0.77
NEDD9-210ENST00000505589 TAS1R2Q8TE23 839 aa10.27□□□□□ -0.77
NEDD9-210ENST00000505589 KLHDC7BQ96G42 594 aa10.27□□□□□ -0.77
NEDD9-210ENST00000505589 P2RY11Q96G91 374 aa10.27□□□□□ -0.77
NEDD9-210ENST00000505589 CCDC34Q96HJ3 373 aa10.27□□□□□ -0.77
NEDD9-210ENST00000505589 TRIM62Q9BVG3 475 aa10.27□□□□□ -0.77
NEDD9-210ENST00000505589 THSD1Q9NS62 852 aa10.27□□□□□ -0.77
NEDD9-210ENST00000505589 CISHQ9NSE2 258 aa10.27□□□□□ -0.77
NEDD9-210ENST00000505589 RAB20Q9NX57 234 aa10.27□□□□□ -0.77
NEDD9-210ENST00000505589 NCKIPSDQ9NZQ3 722 aa10.27□□□□□ -0.77
NEDD9-210ENST00000505589 SFMBT1Q9UHJ3 866 aa10.27□□□□□ -0.77
NEDD9-210ENST00000505589 SLC12A6Q9UHW9 1150 aa10.27□□□□□ -0.77
NEDD9-210ENST00000505589 MTMR6Q9Y217 621 aa10.27□□□□□ -0.77
NEDD9-210ENST00000505589 FARP1Q9Y4F1 1045 aaPredicted RBP10.27□□□□□ -0.77
NEDD9-210ENST00000505589 SLCO1B1Q9Y6L6 691 aa10.27□□□□□ -0.77
NEDD9-210ENST00000505589 BPTFQ12830 3046 aa10.26□□□□□ -0.77
NEDD9-210ENST00000505589 K7ELQ4 463 aaPredicted RBP10.26□□□□□ -0.77
NEDD9-210ENST00000505589 LATO43561 262 aa10.26□□□□□ -0.77
NEDD9-210ENST00000505589 FBXO21O94952 628 aa10.26□□□□□ -0.77
NEDD9-210ENST00000505589 IL1BP01584 269 aa10.26□□□□□ -0.77
NEDD9-210ENST00000505589 WNT1P04628 370 aa10.26□□□□□ -0.77
NEDD9-210ENST00000505589 VDRP11473 427 aa10.26□□□□□ -0.77
NEDD9-210ENST00000505589 RBMS1P29558 406 aaKnown RBP10.26□□□□□ -0.77
NEDD9-210ENST00000505589 CD70P32970 193 aa10.26□□□□□ -0.77
NEDD9-210ENST00000505589 CSKP41240 450 aa10.26□□□□□ -0.77
NEDD9-210ENST00000505589 ME1P48163 572 aa10.26□□□□□ -0.77
NEDD9-210ENST00000505589 RAD23BP54727 409 aa10.26□□□□□ -0.77
NEDD9-210ENST00000505589 INHBCP55103 352 aa10.26□□□□□ -0.77
NEDD9-210ENST00000505589 TBX4P57082 545 aa10.26□□□□□ -0.77
NEDD9-210ENST00000505589 INSM1Q01101 510 aaPredicted RBP10.26□□□□□ -0.77
NEDD9-210ENST00000505589 VAC14Q08AM6 782 aa10.26□□□□□ -0.77
NEDD9-210ENST00000505589 NNTQ13423 1086 aa10.26□□□□□ -0.77
NEDD9-210ENST00000505589 SHBQ15464 509 aa10.26□□□□□ -0.77
NEDD9-210ENST00000505589 C9orf64Q5T6V5 341 aa10.26□□□□□ -0.77
NEDD9-210ENST00000505589 NEK5Q6P3R8 708 aa10.26□□□□□ -0.77
NEDD9-210ENST00000505589 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.26□□□□□ -0.77
NEDD9-210ENST00000505589 KDM7AQ6ZMT4 941 aa10.26□□□□□ -0.77
NEDD9-210ENST00000505589 ERICH1Q86X53 443 aa10.26□□□□□ -0.77
NEDD9-210ENST00000505589 DCP2Q8IU60 420 aaKnown RBP10.26□□□□□ -0.77
NEDD9-210ENST00000505589 FAM186BQ8IYM0 893 aa10.26□□□□□ -0.77
NEDD9-210ENST00000505589 CARNMT1Q8N4J0 409 aa10.26□□□□□ -0.77
NEDD9-210ENST00000505589 SLC4A11Q8NBS3 891 aa10.26□□□□□ -0.77
NEDD9-210ENST00000505589 SPDYE1Q8NFV5 336 aaPredicted RBP10.26□□□□□ -0.77
NEDD9-210ENST00000505589 SNRNP27Q8WVK2 155 aaKnown RBP10.26□□□□□ -0.77
NEDD9-210ENST00000505589 KCNE4Q8WWG9 221 aa10.26□□□□□ -0.77
NEDD9-210ENST00000505589 ELMO3Q96BJ8 720 aa10.26□□□□□ -0.77
NEDD9-210ENST00000505589 MED8Q96G25 268 aa10.26□□□□□ -0.77
NEDD9-210ENST00000505589 SERPINB11Q96P15 392 aa10.26□□□□□ -0.77
NEDD9-210ENST00000505589 SPAG5Q96R06 1193 aa10.26□□□□□ -0.77
NEDD9-210ENST00000505589 EBF2Q9HAK2 575 aa10.26□□□□□ -0.77
NEDD9-210ENST00000505589 APOBEC3GQ9HC16 384 aaKnown RBP10.26□□□□□ -0.77
NEDD9-210ENST00000505589 TSPAN16Q9UKR8 245 aa10.26□□□□□ -0.77
NEDD9-210ENST00000505589 ERVW-1Q9UQF0 538 aa10.26□□□□□ -0.77
NEDD9-210ENST00000505589 HELZ2Q9BYK8 2649 aaKnown RBP10.26□□□□□ -0.77
NEDD9-210ENST00000505589 C1QTNF3-AMACRE9PGA6 284 aa10.25□□□□□ -0.77
NEDD9-210ENST00000505589 SART1O43290 800 aaKnown RBP10.25□□□□□ -0.77
NEDD9-210ENST00000505589 ZNF18P17022 549 aa10.25□□□□□ -0.77
NEDD9-210ENST00000505589 TBXAS1P24557 533 aaPredicted RBP10.25□□□□□ -0.77
NEDD9-210ENST00000505589 VASPP50552 380 aaPredicted RBP10.25□□□□□ -0.77
NEDD9-210ENST00000505589 ADPRHP54922 357 aa10.25□□□□□ -0.77
NEDD9-210ENST00000505589 MCCD1P59942 119 aaPredicted RBP10.25□□□□□ -0.77
NEDD9-210ENST00000505589 ADIGQ0VDE8 80 aa10.25□□□□□ -0.77
NEDD9-210ENST00000505589 PROX2Q3B8N5 592 aa10.25□□□□□ -0.77
NEDD9-210ENST00000505589 RESP18Q5W5W9 173 aa10.25□□□□□ -0.77
NEDD9-210ENST00000505589 MSANTD2Q6P1R3 559 aa10.25□□□□□ -0.77
NEDD9-210ENST00000505589 IGF2-ASQ6U949 168 aa10.25□□□□□ -0.77
NEDD9-210ENST00000505589 WDR48Q8TAF3 677 aa10.25□□□□□ -0.77
NEDD9-210ENST00000505589 OR8D1Q8WZ84 308 aa10.25□□□□□ -0.77
NEDD9-210ENST00000505589 EDEM1Q92611 657 aa10.25□□□□□ -0.77
NEDD9-210ENST00000505589 RNF34Q969K3 372 aa10.25□□□□□ -0.77
NEDD9-210ENST00000505589 IFT43Q96FT9 208 aa10.25□□□□□ -0.77
NEDD9-210ENST00000505589 HSFY1Q96LI6 401 aa10.25□□□□□ -0.77
NEDD9-210ENST00000505589 FAM129BQ96TA1 746 aa10.25□□□□□ -0.77
NEDD9-210ENST00000505589 POLR1BQ9H9Y6 1135 aa10.25□□□□□ -0.77
NEDD9-210ENST00000505589 KLHL11Q9NVR0 708 aa10.25□□□□□ -0.77
NEDD9-210ENST00000505589 STIM2Q9P246 746 aa10.25□□□□□ -0.77
NEDD9-210ENST00000505589 TJP2Q9UDY2 1190 aa10.25□□□□□ -0.77
NEDD9-210ENST00000505589 ITIH6Q6UXX5 1313 aa10.25□□□□□ -0.77
NEDD9-210ENST00000505589 TMEM131Q92545 1883 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms