RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 RPL10AP62906 217 aaKnown RBP11.62□□□□□ -0.55
NFKB1-205ENST00000505458 FAAP100Q0VG06 881 aa11.62□□□□□ -0.55
NFKB1-205ENST00000505458 ATG16L1Q676U5 607 aa11.62□□□□□ -0.55
NFKB1-205ENST00000505458 ATPAF2Q8N5M1 289 aa11.62□□□□□ -0.55
NFKB1-205ENST00000505458 IL22Q9GZX6 179 aa11.62□□□□□ -0.55
NFKB1-205ENST00000505458 TMEM30AQ9NV96 361 aa11.62□□□□□ -0.55
NFKB1-205ENST00000505458 PRKAG3Q9UGI9 489 aa11.62□□□□□ -0.55
NFKB1-205ENST00000505458 FAM92AA1XBS5 289 aa11.61□□□□□ -0.55
NFKB1-205ENST00000505458 I3L4J1 428 aa11.61□□□□□ -0.55
NFKB1-205ENST00000505458 BIRC5O15392 142 aa11.61□□□□□ -0.55
NFKB1-205ENST00000505458 MRPL58Q14197 206 aaKnown RBP11.61□□□□□ -0.55
NFKB1-205ENST00000505458 EFTUD2Q15029 972 aaKnown RBP eCLIP11.61□□□□□ -0.553e-6■■■■□ 23.5
NFKB1-205ENST00000505458 SLC39A12Q504Y0 691 aa11.61□□□□□ -0.55
NFKB1-205ENST00000505458 PLEKHG4Q58EX7 1191 aa11.61□□□□□ -0.55
NFKB1-205ENST00000505458 MANEALQ5VSG8 457 aa11.61□□□□□ -0.55
NFKB1-205ENST00000505458 CASC4Q6P4E1 433 aa11.61□□□□□ -0.55
NFKB1-205ENST00000505458 KYAT3Q6YP21 454 aaKnown RBP11.61□□□□□ -0.55
NFKB1-205ENST00000505458 MICALL1Q8N3F8 863 aa11.61□□□□□ -0.55
NFKB1-205ENST00000505458 PDCD7Q8N8D1 485 aaKnown RBP11.61□□□□□ -0.55
NFKB1-205ENST00000505458 ATP6V0D2Q8N8Y2 350 aa11.61□□□□□ -0.55
NFKB1-205ENST00000505458 TCP10LQ8TDR4 215 aa11.61□□□□□ -0.55
NFKB1-205ENST00000505458 EDEM1Q92611 657 aa11.61□□□□□ -0.55
NFKB1-205ENST00000505458 TEKT5Q96M29 485 aa11.61□□□□□ -0.55
NFKB1-205ENST00000505458 CASS4Q9NQ75 786 aa11.61□□□□□ -0.55
NFKB1-205ENST00000505458 TMLHEQ9NVH6 421 aa11.61□□□□□ -0.55
NFKB1-205ENST00000505458 CACNG4Q9UBN1 327 aa11.61□□□□□ -0.55
NFKB1-205ENST00000505458 USP1O94782 785 aa11.61□□□□□ -0.55
NFKB1-205ENST00000505458 CDK7P50613 346 aa11.61□□□□□ -0.55
NFKB1-205ENST00000505458 INSCQ1MX18 579 aa11.61□□□□□ -0.55
NFKB1-205ENST00000505458 LRRTM3Q86VH5 581 aa11.61□□□□□ -0.55
NFKB1-205ENST00000505458 LCA5Q86VQ0 697 aa11.61□□□□□ -0.55
NFKB1-205ENST00000505458 ZNF276Q8N554 614 aa11.61□□□□□ -0.55
NFKB1-205ENST00000505458 CPNE1Q99829 537 aa11.61□□□□□ -0.55
NFKB1-205ENST00000505458 SIKE1Q9BRV8 207 aa11.61□□□□□ -0.55
NFKB1-205ENST00000505458 TUBB6Q9BUF5 446 aa11.61□□□□□ -0.55
NFKB1-205ENST00000505458 PPARGC1AQ9UBK2 798 aaKnown RBP11.61□□□□□ -0.55
NFKB1-205ENST00000505458 PHTF1Q9UMS5 762 aa11.61□□□□□ -0.55
NFKB1-205ENST00000505458 A0A1W2PPM1 405 aa11.61□□□□□ -0.55
NFKB1-205ENST00000505458 NRLP54845 237 aa11.61□□□□□ -0.55
NFKB1-205ENST00000505458 GEMP55040 296 aa11.61□□□□□ -0.55
NFKB1-205ENST00000505458 TTC31Q49AM3 519 aaPredicted RBP11.61□□□□□ -0.55
NFKB1-205ENST00000505458 CTXN3Q4LDR2 81 aa11.61□□□□□ -0.55
NFKB1-205ENST00000505458 PAN2Q504Q3 1202 aaKnown RBP11.61□□□□□ -0.55
NFKB1-205ENST00000505458 VARS2Q5ST30 1063 aaKnown RBP11.61□□□□□ -0.55
NFKB1-205ENST00000505458 GRTP1Q5TC63 336 aa11.61□□□□□ -0.55
NFKB1-205ENST00000505458 ANKS3Q6ZW76 656 aa11.61□□□□□ -0.55
NFKB1-205ENST00000505458 RTN4RL1Q86UN2 441 aaPredicted RBP11.61□□□□□ -0.55
NFKB1-205ENST00000505458 NPAS4Q8IUM7 802 aa11.61□□□□□ -0.55
NFKB1-205ENST00000505458 LINC01599Q8WXQ3 324 aa11.61□□□□□ -0.55
NFKB1-205ENST00000505458 MID2Q9UJV3 735 aa11.61□□□□□ -0.55
NFKB1-205ENST00000505458 TANC1Q9C0D5 1861 aa11.61□□□□□ -0.55
NFKB1-205ENST00000505458 FAM237BA0A1B0GVD1 139 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 CACNG3O60359 315 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 AVILO75366 819 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 MAP3K6O95382 1288 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 ALDH2P05091 517 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 FGFR3P22607 806 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 NDST2P52849 883 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 NIPAL4Q0D2K0 466 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 CDH17Q12864 832 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 CRYMQ14894 314 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 ZNF75CPQ92670 426 aaPredicted RBP11.6□□□□□ -0.55
NFKB1-205ENST00000505458 MRRFQ96E11 262 aaKnown RBP11.6□□□□□ -0.55
NFKB1-205ENST00000505458 OSBPL7Q9BZF2 842 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 FAM96AQ9H5X1 160 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 TLR8Q9NR97 1041 aaKnown RBP11.6□□□□□ -0.55
NFKB1-205ENST00000505458 TXLNGQ9NUQ3 528 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 SLC12A4Q9UP95 1085 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 GLRA3O75311 464 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 DDHD2O94830 711 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 DNAJB1P25685 340 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 CRHR1P34998 444 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 GP5P40197 560 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 CSE1LP55060 971 aaKnown RBP11.6□□□□□ -0.55
NFKB1-205ENST00000505458 MBTPS1Q14703 1052 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 SCN4BQ8IWT1 228 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 RTL3Q8N8U3 475 aaKnown RBP11.6□□□□□ -0.55
NFKB1-205ENST00000505458 ADAM32Q8TC27 787 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 MANSC1Q9H8J5 431 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 ABI2Q9NYB9 513 aaPredicted RBP11.6□□□□□ -0.55
NFKB1-205ENST00000505458 VANGL2Q9ULK5 521 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 CAPN7Q9Y6W3 813 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 ARHGAP42A6NI28 874 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 TRPA1O75762 1119 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 FOXN2P32314 431 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 SCTRP47872 440 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 POLD2P49005 469 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 LIG3P49916 1009 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 SLC1A5Q15758 541 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 KCTD11Q693B1 232 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 SH2D5Q6ZV89 423 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 HASPINQ8TF76 798 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 FCRL5Q96RD9 977 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 MRM3Q9HC36 420 aaKnown RBP11.6□□□□□ -0.55
NFKB1-205ENST00000505458 GRID1Q9ULK0 1009 aa11.6□□□□□ -0.55
NFKB1-205ENST00000505458 KCNU1A8MYU2 1149 aa11.59□□□□□ -0.55
NFKB1-205ENST00000505458 FAM72CH0Y354 149 aa11.59□□□□□ -0.55
NFKB1-205ENST00000505458 PAGE1O75459 146 aa11.59□□□□□ -0.55
NFKB1-205ENST00000505458 YWHAQP27348 245 aa11.59□□□□□ -0.55
NFKB1-205ENST00000505458 ETV4P43268 484 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms