RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 ADIPOR2Q86V24 386 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 FAM124AQ86V42 546 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 SPATS2Q86XZ4 545 aaKnown RBP6.27□□□□□ -1.41
GYPB-204ENST00000504951 CBWD2Q8IUF1 395 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 NOC3LQ8WTT2 800 aaKnown RBP6.27□□□□□ -1.41
GYPB-204ENST00000504951 TTC17Q96AE7 1141 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 LMLNQ96KR4 655 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 DUSP23Q9BVJ7 150 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 B3GNT4Q9C0J1 378 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 DPEP3Q9H4B8 488 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 KLHL11Q9NVR0 708 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 FBXL12Q9NXK8 326 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 NCKIPSDQ9NZQ3 722 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 ARHGAP20Q9P2F6 1191 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 AGO1Q9UL18 857 aaKnown RBP6.27□□□□□ -1.41
GYPB-204ENST00000504951 CLEC4EQ9ULY5 219 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 PCDHGA7Q9Y5G6 932 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 SRPRBQ9Y5M8 271 aaKnown RBP6.27□□□□□ -1.41
GYPB-204ENST00000504951 RELNP78509 3460 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 NEMP2A6NFY4 417 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 SLC7A4O43246 635 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 SIGLEC6O43699 453 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 RNASEH1O60930 286 aaKnown RBP6.26□□□□□ -1.41
GYPB-204ENST00000504951 CSO75390 466 aaKnown RBP6.26□□□□□ -1.41
GYPB-204ENST00000504951 BEST1O76090 585 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 ASLP04424 464 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 MPOP05164 745 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 GOT1P17174 413 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 C5AR1P21730 350 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 DGKAP23743 735 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 HOXD9P28356 352 aaPredicted RBP6.26□□□□□ -1.41
GYPB-204ENST00000504951 RBMS1P29558 406 aaKnown RBP6.26□□□□□ -1.41
GYPB-204ENST00000504951 ARID5AQ03989 594 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 NFATC3Q12968 1075 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 CLN3Q13286 438 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 MORC3Q14149 939 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 HS1BP3Q53T59 392 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 PRAMEF14Q5SWL7 426 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 NCEH1Q6PIU2 408 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 LAYNQ6UX15 382 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 SND1Q7KZF4 910 aaKnown RBP eCLIP6.26□□□□□ -1.415e-6■■■□□ 15.5
GYPB-204ENST00000504951 SV2BQ7L1I2 683 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 SCD5Q86SK9 330 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 PRPF39Q86UA1 669 aaKnown RBP6.26□□□□□ -1.41
GYPB-204ENST00000504951 TRIM69Q86WT6 500 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 SYCP3Q8IZU3 236 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 AHI1Q8N157 1196 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 ARHGAP18Q8N392 663 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 ARL14Q8N4G2 192 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 PDILTQ8N807 584 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 TAF4BQ92750 862 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 AZIN2Q96A70 460 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 ELMO3Q96BJ8 720 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 PLD4Q96BZ4 506 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 SGF29Q96ES7 293 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 MYO19Q96H55 970 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 SERAC1Q96JX3 654 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 USP28Q96RU2 1077 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 CGRRF1Q99675 332 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 CIPCQ9C0C6 399 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 GZF1Q9H116 711 aaPredicted RBP6.26□□□□□ -1.41
GYPB-204ENST00000504951 NEUROG2Q9H2A3 272 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 ADNPQ9H2P0 1102 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 NMUR1Q9HB89 426 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 PANK4Q9NVE7 773 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 GEMIN8Q9NWZ8 242 aaKnown RBP6.26□□□□□ -1.41
GYPB-204ENST00000504951 NLGN3Q9NZ94 848 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 CGNQ9P2M7 1197 aaKnown RBP6.26□□□□□ -1.41
GYPB-204ENST00000504951 TUBD1Q9UJT1 453 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 CSNK1G3Q9Y6M4 447 aa6.26□□□□□ -1.41
GYPB-204ENST00000504951 TEP1Q99973 2627 aaKnown RBP6.26□□□□□ -1.41
GYPB-204ENST00000504951 ITIH6Q6UXX5 1313 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 LY6G6EA0A0G2JKS1 128 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 A0A1W2PNU3 283 aaPredicted RBP6.25□□□□□ -1.41
GYPB-204ENST00000504951 A0A1W2PQH9 124 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 PRAMEF26H0Y7S4 382 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 TMX2-CTNND1H3BSU7 103 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 PYCARD-AS1I3L0S3 204 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 WNT9AO14904 365 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 SCAMP1O15126 338 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 IRAK2O43187 625 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 TGFB1I1O43294 461 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 STX6O43752 255 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 GJB6O95452 261 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 RPN1P04843 607 aaKnown RBP6.25□□□□□ -1.41
GYPB-204ENST00000504951 SRPRAP08240 638 aaKnown RBP6.25□□□□□ -1.41
GYPB-204ENST00000504951 ITGA2BP08514 1039 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 FAM200BP0CF97 657 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 ALPPL2P10696 532 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 PABPC1P11940 636 aaKnown RBP6.25□□□□□ -1.41
GYPB-204ENST00000504951 SYT1P21579 422 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 CORO1AP31146 461 aaKnown RBP6.25□□□□□ -1.41
GYPB-204ENST00000504951 STAT6P42226 847 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 IFRD2Q12894 506 aaPredicted RBP6.25□□□□□ -1.41
GYPB-204ENST00000504951 EIF3IQ13347 325 aaKnown RBP6.25□□□□□ -1.41
GYPB-204ENST00000504951 CUL4AQ13619 759 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 CST6Q15828 149 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 FNDC3BQ53EP0 1204 aaKnown RBP6.25□□□□□ -1.41
GYPB-204ENST00000504951 C4orf17Q53FE4 359 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 C10orf120Q5SQS8 335 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms