RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 IL1R2P27930 398 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 ADSLP30566 484 aaPredicted RBP4.43□□□□□ -1.7
RFC1-208ENST00000504849 NPTX2P47972 431 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 RFX5P48382 616 aaPredicted RBP4.43□□□□□ -1.7
RFC1-208ENST00000504849 AARSP49588 968 aaKnown RBP eCLIP4.43□□□□□ -1.78e-6■■■■■ 52.4
RFC1-208ENST00000504849 CCR5P51681 352 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 ARF3P61204 181 aaPredicted RBP4.43□□□□□ -1.7
RFC1-208ENST00000504849 AP2B1P63010 937 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 POU6F2P78424 691 aaPredicted RBP4.43□□□□□ -1.7
RFC1-208ENST00000504849 ARF1P84077 181 aaKnown RBP4.43□□□□□ -1.7
RFC1-208ENST00000504849 MXRA7P84157 204 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 CASP8Q14790 479 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 KARSQ15046 597 aaKnown RBP4.43□□□□□ -1.7
RFC1-208ENST00000504849 RILPL1Q5EBL4 403 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 ZNF569Q5MCW4 686 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 BEND6Q5SZJ8 279 aaPredicted RBP4.43□□□□□ -1.7
RFC1-208ENST00000504849 KANK2Q63ZY3 851 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 ACAD10Q6JQN1 1059 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 WDR93Q6P2C0 686 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 GBP6Q6ZN66 633 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 ENOSF1Q7L5Y1 443 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 CXXC5Q7LFL8 322 aaKnown RBP4.43□□□□□ -1.7
RFC1-208ENST00000504849 TMEM139Q8IV31 216 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 SLC44A2Q8IWA5 706 aaPredicted RBP4.43□□□□□ -1.7
RFC1-208ENST00000504849 TTC5Q8N0Z6 440 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 PQLC1Q8N2U9 271 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 TC2NQ8N9U0 490 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 OR6Y1Q8NGX8 325 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 CCHCR1Q8TD31 782 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 ZNF480Q8WV37 535 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 AFG1LQ8WV93 481 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 ST8SIA4Q92187 359 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 RAB24Q969Q5 203 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 DYDC2Q96IM9 177 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 ZMAT2Q96NC0 199 aaKnown RBP4.43□□□□□ -1.7
RFC1-208ENST00000504849 ASB2Q96Q27 587 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 WDR24Q96S15 920 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 MYCBPQ99417 103 aaPredicted RBP4.43□□□□□ -1.7
RFC1-208ENST00000504849 TACO1Q9BSH4 297 aaKnown RBP4.43□□□□□ -1.7
RFC1-208ENST00000504849 CRACR2AQ9BSW2 395 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 PAIP1Q9H074 479 aaKnown RBP4.43□□□□□ -1.7
RFC1-208ENST00000504849 PABPC3Q9H361 631 aaKnown RBP4.43□□□□□ -1.7
RFC1-208ENST00000504849 PDE11AQ9HCR9 933 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 PRDM8Q9NQV8 689 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 PLSCR4Q9NRQ2 329 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 TMEM140Q9NV12 185 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 MTO1Q9Y2Z2 717 aaKnown RBP4.43□□□□□ -1.7
RFC1-208ENST00000504849 MROH7-TTC4A0A0A0MT08 1334 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 NEDD4P46934 1319 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 SYNRGQ9UMZ2 1314 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 COL16A1Q07092 1604 aaPredicted RBP4.43□□□□□ -1.7
RFC1-208ENST00000504849 A0A087WWV3 80 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 SYNDIG1LA6NDD5 238 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 EIF3CLB5ME19 914 aaKnown RBP4.42□□□□□ -1.7
RFC1-208ENST00000504849 TMEM232C9JQI7 657 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 GOLGA8KD6RF30 607 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 H3BQF6 201 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 KDM6AO15550 1401 aaPredicted RBP4.42□□□□□ -1.7
RFC1-208ENST00000504849 TEX33O43247 280 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 PRAMEF4O60810 478 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 MFAP3LO75121 409 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 IPO7O95373 1038 aaKnown RBP4.42□□□□□ -1.7
RFC1-208ENST00000504849 MATN4O95460 622 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 SGPL1O95470 568 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 SCGB1D1O95968 90 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 GASTP01350 101 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 AHSGP02765 367 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 PRKCBP05771 671 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 IGKV5-2P06315 115 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 SNRPA1P09661 255 aaKnown RBP4.42□□□□□ -1.7
RFC1-208ENST00000504849 FDPSP14324 419 aaKnown RBP4.42□□□□□ -1.7
RFC1-208ENST00000504849 ZNF18P17022 549 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 HDCP19113 662 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 MARCKSP29966 332 aaPredicted RBP4.42□□□□□ -1.7
RFC1-208ENST00000504849 GUCY1A2P33402 732 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 CRHR1P34998 444 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 SREBF1P36956 1147 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 WNT3AP56704 352 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 RNASE9P60153 205 aaKnown RBP4.42□□□□□ -1.7
RFC1-208ENST00000504849 MTM1Q13496 603 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 PNOCQ13519 176 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 SLC12A1Q13621 1099 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 ERV3-1Q14264 604 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 UBE3CQ15386 1083 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 PROSER3Q2NL68 480 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 NAA35Q5VZE5 725 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 HAUS3Q68CZ6 603 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 KRT40Q6A162 431 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 SHC4Q6S5L8 630 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 OLFML1Q6UWY5 402 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 RASGRP2Q7LDG7 609 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 ADGRE4PQ86SQ3 457 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 TADA2BQ86TJ2 420 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 RPAINQ86UA6 219 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 MB21D2Q8IYB1 491 aaPredicted RBP4.42□□□□□ -1.7
RFC1-208ENST00000504849 USP38Q8NB14 1042 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 FAM76AQ8TAV0 307 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 CAGE1Q8TC20 777 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 ZUFSPQ96AP4 578 aa4.42□□□□□ -1.7
RFC1-208ENST00000504849 EDC3Q96F86 508 aaKnown RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms