RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 CAPZA3Q96KX2 299 aa14.25□□□□□ -0.13
CYSTM1-202ENST00000504227 PRICKLE1Q96MT3 831 aaPredicted RBP14.25□□□□□ -0.13
CYSTM1-202ENST00000504227 BBS2Q9BXC9 721 aa14.25□□□□□ -0.13
CYSTM1-202ENST00000504227 TMEM248Q9NWD8 314 aa14.25□□□□□ -0.13
CYSTM1-202ENST00000504227 CDC23Q9UJX2 597 aa14.25□□□□□ -0.13
CYSTM1-202ENST00000504227 TTC7AQ9ULT0 858 aaPredicted RBP14.25□□□□□ -0.13
CYSTM1-202ENST00000504227 NEU3Q9UQ49 428 aa14.25□□□□□ -0.13
CYSTM1-202ENST00000504227 H0Y626 953 aa14.24□□□□□ -0.13
CYSTM1-202ENST00000504227 ARSAP15289 507 aa14.24□□□□□ -0.13
CYSTM1-202ENST00000504227 TGM2P21980 687 aa14.24□□□□□ -0.13
CYSTM1-202ENST00000504227 OR1E1P30953 314 aa14.24□□□□□ -0.13
CYSTM1-202ENST00000504227 SERPINB6P35237 376 aa14.24□□□□□ -0.13
CYSTM1-202ENST00000504227 MAPKAPK2P49137 400 aa14.24□□□□□ -0.13
CYSTM1-202ENST00000504227 IRAK1P51617 712 aa14.24□□□□□ -0.13
CYSTM1-202ENST00000504227 SGSHP51688 502 aa14.24□□□□□ -0.13
CYSTM1-202ENST00000504227 GAD2Q05329 585 aa14.24□□□□□ -0.13
CYSTM1-202ENST00000504227 TRIM68Q6AZZ1 485 aa14.24□□□□□ -0.13
CYSTM1-202ENST00000504227 RHBDF2Q6PJF5 856 aa14.24□□□□□ -0.13
CYSTM1-202ENST00000504227 TFAP2DQ7Z6R9 452 aa14.24□□□□□ -0.13
CYSTM1-202ENST00000504227 NLRP14Q86W24 1093 aa14.24□□□□□ -0.13
CYSTM1-202ENST00000504227 CREG2Q8IUH2 290 aa14.24□□□□□ -0.13
CYSTM1-202ENST00000504227 CARNMT1Q8N4J0 409 aa14.24□□□□□ -0.13
CYSTM1-202ENST00000504227 CPA6Q8N4T0 437 aa14.24□□□□□ -0.13
CYSTM1-202ENST00000504227 PLD5Q8N7P1 536 aa14.24□□□□□ -0.13
CYSTM1-202ENST00000504227 TTC13Q8NBP0 860 aa14.24□□□□□ -0.13
CYSTM1-202ENST00000504227 RSAD2Q8WXG1 361 aa14.24□□□□□ -0.13
CYSTM1-202ENST00000504227 BHMTQ93088 406 aa14.24□□□□□ -0.13
CYSTM1-202ENST00000504227 EBF3Q9H4W6 596 aa14.24□□□□□ -0.13
CYSTM1-202ENST00000504227 BRD9Q9H8M2 597 aa14.24□□□□□ -0.13
CYSTM1-202ENST00000504227 KCNK12Q9HB15 430 aa14.24□□□□□ -0.13
CYSTM1-202ENST00000504227 ETNK2Q9NVF9 386 aa14.24□□□□□ -0.13
CYSTM1-202ENST00000504227 MARK1Q9P0L2 795 aa14.24□□□□□ -0.13
CYSTM1-202ENST00000504227 PRKAG3Q9UGI9 489 aa14.24□□□□□ -0.13
CYSTM1-202ENST00000504227 LOC730098B7Z3J9 87 aa14.23□□□□□ -0.13
CYSTM1-202ENST00000504227 NEDD8-MDP1E9PL57 170 aa14.23□□□□□ -0.13
CYSTM1-202ENST00000504227 PENKP01210 267 aaPredicted RBP14.23□□□□□ -0.13
CYSTM1-202ENST00000504227 CYP17A1P05093 508 aa14.23□□□□□ -0.13
CYSTM1-202ENST00000504227 ADH5P11766 374 aa14.23□□□□□ -0.13
CYSTM1-202ENST00000504227 TYRP14679 529 aa14.23□□□□□ -0.13
CYSTM1-202ENST00000504227 NR2C2P49116 596 aa14.23□□□□□ -0.13
CYSTM1-202ENST00000504227 OXCT1P55809 520 aa14.23□□□□□ -0.13
CYSTM1-202ENST00000504227 ADCY2Q08462 1091 aa14.23□□□□□ -0.13
CYSTM1-202ENST00000504227 RUNX3Q13761 415 aa14.23□□□□□ -0.13
CYSTM1-202ENST00000504227 PAFAH1B3Q15102 231 aaKnown RBP14.23□□□□□ -0.13
CYSTM1-202ENST00000504227 WHAMMP3Q1A5X7 153 aa14.23□□□□□ -0.13
CYSTM1-202ENST00000504227 C6orf118Q5T5N4 469 aa14.23□□□□□ -0.13
CYSTM1-202ENST00000504227 FYB2Q5VWT5 728 aa14.23□□□□□ -0.13
CYSTM1-202ENST00000504227 C1orf228Q6PIY5 440 aa14.23□□□□□ -0.13
CYSTM1-202ENST00000504227 BZW1Q7L1Q6 419 aaKnown RBP14.23□□□□□ -0.13
CYSTM1-202ENST00000504227 ADAT2Q7Z6V5 191 aaKnown RBP14.23□□□□□ -0.13
CYSTM1-202ENST00000504227 SETD3Q86TU7 594 aaPredicted RBP14.23□□□□□ -0.13
CYSTM1-202ENST00000504227 ADHFE1Q8IWW8 467 aa14.23□□□□□ -0.13
CYSTM1-202ENST00000504227 SLC44A3Q8N4M1 653 aa14.23□□□□□ -0.13
CYSTM1-202ENST00000504227 ZNF557Q8N988 423 aaPredicted RBP14.23□□□□□ -0.13
CYSTM1-202ENST00000504227 P3H4Q92791 437 aa14.23□□□□□ -0.13
CYSTM1-202ENST00000504227 XPO6Q96QU8 1125 aaKnown RBP14.23□□□□□ -0.13
CYSTM1-202ENST00000504227 HERPUD2Q9BSE4 406 aa14.23□□□□□ -0.13
CYSTM1-202ENST00000504227 ECT2Q9H8V3 914 aa14.23□□□□□ -0.13
CYSTM1-202ENST00000504227 PLK2Q9NYY3 685 aa14.23□□□□□ -0.13
CYSTM1-202ENST00000504227 HEY1Q9Y5J3 304 aa14.23□□□□□ -0.13
CYSTM1-202ENST00000504227 TCRBV7S2A1N4TA0A589 114 aa14.22□□□□□ -0.13
CYSTM1-202ENST00000504227 APOC4-APOC2K7ER74 178 aa14.22□□□□□ -0.13
CYSTM1-202ENST00000504227 KRIT1O00522 736 aa14.22□□□□□ -0.13
CYSTM1-202ENST00000504227 HOXC11O43248 304 aaPredicted RBP14.22□□□□□ -0.13
CYSTM1-202ENST00000504227 LUC7L3O95232 432 aaKnown RBP14.22□□□□□ -0.13
CYSTM1-202ENST00000504227 APOC2P02655 101 aa14.22□□□□□ -0.13
CYSTM1-202ENST00000504227 RHOCP08134 193 aa14.22□□□□□ -0.13
CYSTM1-202ENST00000504227 HOXD9P28356 352 aaPredicted RBP14.22□□□□□ -0.13
CYSTM1-202ENST00000504227 NDST2P52849 883 aa14.22□□□□□ -0.13
CYSTM1-202ENST00000504227 CKAP4Q07065 602 aaKnown RBP14.22□□□□□ -0.13
CYSTM1-202ENST00000504227 TNK2Q07912 1038 aa14.22□□□□□ -0.13
CYSTM1-202ENST00000504227 KLF1Q13351 362 aaPredicted RBP14.22□□□□□ -0.13
CYSTM1-202ENST00000504227 CDH18Q13634 790 aa14.22□□□□□ -0.13
CYSTM1-202ENST00000504227 ITPRIPL2Q3MIP1 535 aa14.22□□□□□ -0.13
CYSTM1-202ENST00000504227 NCBP2-AS2Q69YL0 99 aa14.22□□□□□ -0.13
CYSTM1-202ENST00000504227 MFN1Q8IWA4 741 aa14.22□□□□□ -0.13
CYSTM1-202ENST00000504227 UMODL1-AS1Q8N2C9 162 aa14.22□□□□□ -0.13
CYSTM1-202ENST00000504227 FIBINQ8TAL6 211 aa14.22□□□□□ -0.13
CYSTM1-202ENST00000504227 ATXN2LQ8WWM7 1075 aaKnown RBP14.22□□□□□ -0.13
CYSTM1-202ENST00000504227 SLC2A11Q9BYW1 496 aa14.22□□□□□ -0.13
CYSTM1-202ENST00000504227 HPS4Q9NQG7 708 aa14.22□□□□□ -0.13
CYSTM1-202ENST00000504227 HOMER3Q9NSC5 361 aa14.22□□□□□ -0.13
CYSTM1-202ENST00000504227 ZNF212Q9UDV6 495 aa14.22□□□□□ -0.13
CYSTM1-202ENST00000504227 TBC1D30Q9Y2I9 924 aa14.22□□□□□ -0.13
CYSTM1-202ENST00000504227 MFHAS1Q9Y4C4 1052 aa14.22□□□□□ -0.13
CYSTM1-202ENST00000504227 RAD54BQ9Y620 910 aa14.22□□□□□ -0.13
CYSTM1-202ENST00000504227 GOLGA6L10A0A0M3HER8 536 aa14.21□□□□□ -0.13
CYSTM1-202ENST00000504227 ILVBLA1L0T0 632 aa14.21□□□□□ -0.13
CYSTM1-202ENST00000504227 ARHGAP42A6NI28 874 aa14.21□□□□□ -0.13
CYSTM1-202ENST00000504227 NCAM2O15394 837 aa14.21□□□□□ -0.13
CYSTM1-202ENST00000504227 RAMP2O60895 175 aa14.21□□□□□ -0.13
CYSTM1-202ENST00000504227 MX2P20592 715 aa14.21□□□□□ -0.13
CYSTM1-202ENST00000504227 ETFBP38117 255 aa14.21□□□□□ -0.13
CYSTM1-202ENST00000504227 YBEYP58557 167 aaPredicted RBP14.21□□□□□ -0.13
CYSTM1-202ENST00000504227 GBE1Q04446 702 aa14.21□□□□□ -0.13
CYSTM1-202ENST00000504227 POLD3Q15054 466 aaPredicted RBP14.21□□□□□ -0.13
CYSTM1-202ENST00000504227 PDK1Q15118 436 aa14.21□□□□□ -0.13
CYSTM1-202ENST00000504227 PARP15Q460N3 678 aa14.21□□□□□ -0.13
CYSTM1-202ENST00000504227 RNF43Q68DV7 783 aa14.21□□□□□ -0.13
CYSTM1-202ENST00000504227 NPNTQ6UXI9 565 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms