RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 EPS8L2Q9H6S3 715 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 PFDN4Q9NQP4 134 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 TMOD2Q9NZR1 351 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 ASIC3Q9UHC3 531 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 ADAMTS1Q9UHI8 967 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 KLK9Q9UKQ9 250 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 COL4A3BPQ9Y5P4 624 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 TLL2Q9Y6L7 1015 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 HMX2A2RU54 273 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 SAGE2PA6NJ88 616 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 HNRNPRO43390 633 aaKnown RBP2.86□□□□□ -1.95
NEDD4-204ENST00000503468 PALMO75781 387 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 TSPAN9O75954 239 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 ARHGEF15O94989 841 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 MMP10P09238 476 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 CDH2P19022 906 aaPredicted RBP2.86□□□□□ -1.95
NEDD4-204ENST00000503468 IL32P24001 234 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 SERPINB1P30740 379 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 GRIK1P39086 918 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 C21orf59P57076 290 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 SLC18A2Q05940 514 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 PDE4DQ08499 809 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 QPCTQ16769 361 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 GAB4Q2WGN9 574 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 HSP90AA4PQ58FG1 418 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 C1orf146Q5VVC0 180 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 KLHL35Q6PF15 583 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 XKRXQ6PP77 449 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 LCLAT1Q6UWP7 414 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 ZDHHC24Q6UX98 284 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 RAB44Q7Z6P3 723 aaPredicted RBP2.86□□□□□ -1.95
NEDD4-204ENST00000503468 RPS4Y2Q8TD47 263 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 MARVELD3Q96A59 401 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 NPY6RQ99463 290 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 TEX13BQ9BXU2 312 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 OSBPL6Q9BZF3 934 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 TMEM165Q9HC07 324 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 CD320Q9NPF0 282 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 ACSL6Q9UKU0 697 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 ARHGAP26Q9UNA1 814 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 SHOC2Q9UQ13 582 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 PIN4Q9Y237 131 aaKnown RBP2.86□□□□□ -1.95
NEDD4-204ENST00000503468 C15orf38-AP3S2A0A0A6YYH1 394 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 TMEM191CA6NGB0 347 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 C16orf96A6NNT2 1141 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 B8ZZF3 427 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 ACKR2O00590 384 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 PFDN6O15212 129 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 SLC22A2O15244 555 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 DDX3YO15523 660 aaKnown RBP2.86□□□□□ -1.95
NEDD4-204ENST00000503468 TFAP2AP05549 437 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 KRT8P05787 483 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 TMEM191BP0C7N4 346 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 FGFR1P11362 822 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 CDK4P11802 303 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 IL12AP29459 219 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 FCHO2Q0JRZ9 810 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 QRICH1Q2TAL8 776 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 FAM26FQ5R3K3 315 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 KRT79Q5XKE5 535 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 ZNF783Q6ZMS7 281 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 MFSD6Q6ZSS7 791 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 HTR3DQ70Z44 454 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 SV2BQ7L1I2 683 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 ARPINQ7Z6K5 226 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 HEATR4Q86WZ0 1026 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 RALGPS2Q86X27 583 aaPredicted RBP2.86□□□□□ -1.95
NEDD4-204ENST00000503468 TPCN2Q8NHX9 752 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 CCDC127Q96BQ5 260 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 AIFM3Q96NN9 605 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 RANBP9Q96S59 729 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 INO80BQ9C086 356 aaPredicted RBP2.86□□□□□ -1.95
NEDD4-204ENST00000503468 PDFQ9HBH1 243 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 KRT82Q9NSB4 513 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 FAM207AQ9NSI2 230 aaPredicted RBP2.86□□□□□ -1.95
NEDD4-204ENST00000503468 CLIC5Q9NZA1 410 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 ZNF180Q9UJW8 692 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 PIAS3Q9Y6X2 628 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 CYP2D7A0A087X1C5 515 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-204ENST00000503468 A0A1B0GWJ7 208 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 ISPDA4D126 451 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 MEIS3P2A8K0S8 358 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 H0YCG3 227 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 TXNDC9O14530 226 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 RGS13O14921 159 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 NOBOXO60393 691 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 MOCS3O95396 460 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 CD160O95971 181 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 FGGP02679 453 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 RBP3P10745 1247 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 TAC1P20366 129 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 ATICP31939 592 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 GRM5P41594 1212 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 ECE1P42892 770 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 ALDH7A1P49419 539 aaKnown RBP2.85□□□□□ -1.95
NEDD4-204ENST00000503468 DEFA1P59665 94 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 DEFA3P59666 94 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 EZH2Q15910 746 aaKnown RBP2.85□□□□□ -1.95
NEDD4-204ENST00000503468 SHQ1Q6PI26 577 aaKnown RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms