RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 FAM3BP58499 235 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 ACTR2P61160 394 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 WDR5P61964 334 aaKnown RBP2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 RBM6P78332 1123 aaKnown RBP2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 PDCLQ13371 301 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 MFSD13AQ14CX5 517 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 SMAD1Q15797 465 aaKnown RBP2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 LEXMQ3ZCV2 418 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 Q4G0T1 1027 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 TBC1D3GQ6DHY5 549 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 DGAT2L7PQ6IED9 249 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 TBC1D3CQ6IPX1 549 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 TMEM65Q6PI78 240 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 SERPINA13PQ6UXR4 307 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 KYAT3Q6YP21 454 aaKnown RBP2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 SYNE3Q6ZMZ3 975 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 DCDC5Q6ZRR9 648 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 RINLQ6ZS11 566 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 HERC6Q8IVU3 1022 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 TBC1D3Q8IZP1 549 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 LINC01465Q8N7H1 131 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 PNISRQ8TF01 805 aaKnown RBP2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 GLMPQ8WWB7 406 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 SDCCAG3Q96C92 435 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 TRMT61AQ96FX7 289 aaKnown RBP2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 KAZALD1Q96I82 304 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 CCDC17Q96LX7 622 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 COG8Q96MW5 612 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 FAM118BQ9BPY3 351 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 TWSG1Q9GZX9 223 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 CDCP1Q9H5V8 836 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 KCNK9Q9NPC2 374 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 RIC8AQ9NPQ8 531 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 G6PC2Q9NQR9 355 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 ASIC5Q9NY37 505 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 C9orf78Q9NZ63 289 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 PCDHA10Q9Y5I2 948 aa2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 LRRFIP2Q9Y608 721 aaKnown RBP2.74□□□□□ -1.97
HMGB1P35-201ENST00000503360 TCRBV5S1A1TA0A578 114 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 RRN3P2A6NIE6 340 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 FAM90A20PA6NIJ5 464 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 AGAP5A6NIR3 686 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 CD8B2A6NJW9 211 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 TTC34A8MYJ7 566 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 SMIM22K7EJ46 135 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 HEXIM1O94992 359 aaKnown RBP2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 TFRCP02786 760 aaKnown RBP2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 POLBP06746 335 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 SLC3A2P08195 630 aaKnown RBP2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 CYP3A4P08684 503 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 CKMT1AP12532 417 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 ATF7P17544 494 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 CNTFP26441 200 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 DUSP1P28562 367 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 AGTR2P50052 363 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 FOXL2P58012 376 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 TAS2R50P59544 299 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 GAB1Q13480 694 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 KCNB1Q14721 858 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 CNGA3Q16281 694 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 FAM110CQ1W6H9 321 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 TBRG1Q3YBR2 411 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 LRRC24Q50LG9 513 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 ALFQ53S48 1182 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 AWAT1Q58HT5 328 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 ZNF628Q5EBL2 1059 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 TMEM63BQ5T3F8 832 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 C10orf25Q5T742 122 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 MEX3CQ5U5Q3 659 aaKnown RBP2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 WDR93Q6P2C0 686 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 LVRNQ6Q4G3 990 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 TMEM57Q8N5G2 664 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 CEP70Q8NHQ1 597 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 ADAMTS18Q8TE60 1221 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 CLEC4CQ8WTT0 213 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 AKAP1Q92667 903 aaKnown RBP eCLIP2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 WBP1Q96G27 269 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 FYTTD1Q96QD9 318 aaKnown RBP2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 ABHD16BQ9H3Z7 469 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 TERF2IPQ9NYB0 399 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 LZTS1Q9Y250 596 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 DERAQ9Y315 318 aa2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 HEMK1Q9Y5R4 338 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P35-201ENST00000503360 TRIP12Q14669 1992 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P35-201ENST00000503360 MBD3L5A6NJ08 208 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P35-201ENST00000503360 KRTAP9-6A8MVA2 160 aa2.72□□□□□ -1.97
HMGB1P35-201ENST00000503360 POC1B-GALNT4F8VUJ3 575 aa2.72□□□□□ -1.97
HMGB1P35-201ENST00000503360 UBE2Q2LH0YL09 131 aa2.72□□□□□ -1.97
HMGB1P35-201ENST00000503360 STX16-NPEPL1H3BU86 382 aa2.72□□□□□ -1.97
HMGB1P35-201ENST00000503360 STX16O14662 325 aa2.72□□□□□ -1.97
HMGB1P35-201ENST00000503360 NCAM2O15394 837 aa2.72□□□□□ -1.97
HMGB1P35-201ENST00000503360 KAT7O95251 611 aa2.72□□□□□ -1.97
HMGB1P35-201ENST00000503360 AGR2O95994 175 aa2.72□□□□□ -1.97
HMGB1P35-201ENST00000503360 ALDOAP04075 364 aaKnown RBP2.72□□□□□ -1.97
HMGB1P35-201ENST00000503360 CENPBP07199 599 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P35-201ENST00000503360 ATP5F1P24539 256 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P35-201ENST00000503360 NDUFS1P28331 727 aa2.72□□□□□ -1.97
HMGB1P35-201ENST00000503360 SLC8A1P32418 973 aa2.72□□□□□ -1.97
HMGB1P35-201ENST00000503360 ARHGAP25P42331 645 aa2.72□□□□□ -1.97
HMGB1P35-201ENST00000503360 PCP4P48539 62 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms