RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 RAP1GAP2Q684P5 730 aa11.11□□□□□ -0.63
SNCA-207ENST00000502987 NADSYN1Q6IA69 706 aa11.11□□□□□ -0.63
SNCA-207ENST00000502987 CHSY1Q86X52 802 aa11.11□□□□□ -0.63
SNCA-207ENST00000502987 DHX40Q8IX18 779 aaKnown RBP11.11□□□□□ -0.63
SNCA-207ENST00000502987 ELOA2Q8IYF1 753 aaPredicted RBP11.11□□□□□ -0.63
SNCA-207ENST00000502987 BIRC7Q96CA5 298 aa11.11□□□□□ -0.63
SNCA-207ENST00000502987 FCRL2Q96LA5 508 aaPredicted RBP11.11□□□□□ -0.63
SNCA-207ENST00000502987 KREMEN1Q96MU8 473 aa11.11□□□□□ -0.63
SNCA-207ENST00000502987 MED15Q96RN5 788 aa11.11□□□□□ -0.63
SNCA-207ENST00000502987 OMDQ99983 421 aa11.11□□□□□ -0.63
SNCA-207ENST00000502987 CRACR2AQ9BSW2 395 aa11.11□□□□□ -0.63
SNCA-207ENST00000502987 SGK2Q9HBY8 427 aa11.11□□□□□ -0.63
SNCA-207ENST00000502987 FBXL12Q9NXK8 326 aa11.11□□□□□ -0.63
SNCA-207ENST00000502987 COX16Q9P0S2 106 aa11.11□□□□□ -0.63
SNCA-207ENST00000502987 KIAA1522Q9P206 1035 aaPredicted RBP11.11□□□□□ -0.63
SNCA-207ENST00000502987 ANKRD6Q9Y2G4 727 aa11.11□□□□□ -0.63
SNCA-207ENST00000502987 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.11□□□□□ -0.63
SNCA-207ENST00000502987 KNL1Q8NG31 2342 aa11.1□□□□□ -0.63
SNCA-207ENST00000502987 SRRM3A6NNA2 597 aaPredicted RBP11.1□□□□□ -0.63
SNCA-207ENST00000502987 E5RJQ4 531 aa11.1□□□□□ -0.63
SNCA-207ENST00000502987 SIN3BO75182 1162 aa11.1□□□□□ -0.63
SNCA-207ENST00000502987 GADD45BO75293 160 aaPredicted RBP11.1□□□□□ -0.63
SNCA-207ENST00000502987 FYNP06241 537 aa11.1□□□□□ -0.63
SNCA-207ENST00000502987 BMP6P22004 513 aa11.1□□□□□ -0.63
SNCA-207ENST00000502987 CD27P26842 260 aa11.1□□□□□ -0.63
SNCA-207ENST00000502987 NNMTP40261 264 aa11.1□□□□□ -0.63
SNCA-207ENST00000502987 NUMBP49757 651 aa11.1□□□□□ -0.63
SNCA-207ENST00000502987 C21orf59P57076 290 aa11.1□□□□□ -0.63
SNCA-207ENST00000502987 YWHAZP63104 245 aaKnown RBP11.1□□□□□ -0.63
SNCA-207ENST00000502987 TPD52L1Q16890 204 aaPredicted RBP11.1□□□□□ -0.63
SNCA-207ENST00000502987 KIF19Q2TAC6 998 aa11.1□□□□□ -0.63
SNCA-207ENST00000502987 DCAF6Q58WW2 860 aa11.1□□□□□ -0.63
SNCA-207ENST00000502987 SYPL2Q5VXT5 272 aa11.1□□□□□ -0.63
SNCA-207ENST00000502987 MMS22LQ6ZRQ5 1243 aa11.1□□□□□ -0.63
SNCA-207ENST00000502987 RAB44Q7Z6P3 723 aaPredicted RBP11.1□□□□□ -0.63
SNCA-207ENST00000502987 TAC4Q86UU9 113 aa11.1□□□□□ -0.63
SNCA-207ENST00000502987 MMAAQ8IVH4 418 aaKnown RBP11.1□□□□□ -0.63
SNCA-207ENST00000502987 ATP6V0D2Q8N8Y2 350 aa11.1□□□□□ -0.63
SNCA-207ENST00000502987 ZNF606Q8WXB4 792 aa11.1□□□□□ -0.63
SNCA-207ENST00000502987 TTC17Q96AE7 1141 aa11.1□□□□□ -0.63
SNCA-207ENST00000502987 RPL10LQ96L21 214 aaKnown RBP11.1□□□□□ -0.63
SNCA-207ENST00000502987 PRICKLE1Q96MT3 831 aaPredicted RBP11.1□□□□□ -0.63
SNCA-207ENST00000502987 CDC6Q99741 560 aa11.1□□□□□ -0.63
SNCA-207ENST00000502987 FAM204AQ9H8W3 233 aa11.1□□□□□ -0.63
SNCA-207ENST00000502987 POPDC2Q9HBU9 364 aa11.1□□□□□ -0.63
SNCA-207ENST00000502987 TM9SF3Q9HD45 589 aa11.1□□□□□ -0.63
SNCA-207ENST00000502987 PCOLCE2Q9UKZ9 415 aa11.1□□□□□ -0.63
SNCA-207ENST00000502987 SCML1Q9UN30 329 aa11.1□□□□□ -0.63
SNCA-207ENST00000502987 ERVW-1Q9UQF0 538 aa11.1□□□□□ -0.63
SNCA-207ENST00000502987 FNDC3AQ9Y2H6 1198 aaKnown RBP11.1□□□□□ -0.63
SNCA-207ENST00000502987 SNX11Q9Y5W9 270 aa11.1□□□□□ -0.63
SNCA-207ENST00000502987 TP53BP1Q12888 1972 aaPredicted RBP11.09□□□□□ -0.63
SNCA-207ENST00000502987 A0A1W2PP55 124 aa11.09□□□□□ -0.63
SNCA-207ENST00000502987 LRRC72A6NJI9 287 aa11.09□□□□□ -0.63
SNCA-207ENST00000502987 TTC34A8MYJ7 566 aa11.09□□□□□ -0.63
SNCA-207ENST00000502987 F5H5T6 163 aa11.09□□□□□ -0.63
SNCA-207ENST00000502987 MID1O15344 667 aa11.09□□□□□ -0.63
SNCA-207ENST00000502987 FLRT2O43155 660 aa11.09□□□□□ -0.63
SNCA-207ENST00000502987 RNASEH2AO75792 299 aaKnown RBP11.09□□□□□ -0.63
SNCA-207ENST00000502987 LUC7L3O95232 432 aaKnown RBP11.09□□□□□ -0.63
SNCA-207ENST00000502987 TRUB2O95900 331 aaKnown RBP11.09□□□□□ -0.63
SNCA-207ENST00000502987 SRPRAP08240 638 aaKnown RBP11.09□□□□□ -0.63
SNCA-207ENST00000502987 ZNF883P0CG24 379 aa11.09□□□□□ -0.63
SNCA-207ENST00000502987 TACR2P21452 398 aa11.09□□□□□ -0.63
SNCA-207ENST00000502987 SLC8A1P32418 973 aa11.09□□□□□ -0.63
SNCA-207ENST00000502987 CTSOP43234 321 aaPredicted RBP11.09□□□□□ -0.63
SNCA-207ENST00000502987 CDK17Q00537 523 aa11.09□□□□□ -0.63
SNCA-207ENST00000502987 ECT2LQ008S8 904 aa11.09□□□□□ -0.63
SNCA-207ENST00000502987 BNC1Q01954 994 aa11.09□□□□□ -0.63
SNCA-207ENST00000502987 NNTQ13423 1086 aa11.09□□□□□ -0.63
SNCA-207ENST00000502987 CST6Q15828 149 aa11.09□□□□□ -0.63
SNCA-207ENST00000502987 CAMK4Q16566 473 aa11.09□□□□□ -0.63
SNCA-207ENST00000502987 HNRNPA1L2Q32P51 320 aaKnown RBP11.09□□□□□ -0.63
SNCA-207ENST00000502987 FSCBQ5H9T9 825 aa11.09□□□□□ -0.63
SNCA-207ENST00000502987 PITRM1Q5JRX3 1037 aa11.09□□□□□ -0.63
SNCA-207ENST00000502987 KIAA0895LQ68EN5 471 aa11.09□□□□□ -0.63
SNCA-207ENST00000502987 GJB7Q6PEY0 223 aa11.09□□□□□ -0.63
SNCA-207ENST00000502987 FOXR2Q6PJQ5 311 aa11.09□□□□□ -0.63
SNCA-207ENST00000502987 LAYNQ6UX15 382 aa11.09□□□□□ -0.63
SNCA-207ENST00000502987 GBP6Q6ZN66 633 aa11.09□□□□□ -0.63
SNCA-207ENST00000502987 ENOSF1Q7L5Y1 443 aa11.09□□□□□ -0.63
SNCA-207ENST00000502987 SLCO6A1Q86UG4 719 aa11.09□□□□□ -0.63
SNCA-207ENST00000502987 C1orf216Q8TAB5 229 aa11.09□□□□□ -0.63
SNCA-207ENST00000502987 STK32AQ8WU08 396 aa11.09□□□□□ -0.63
SNCA-207ENST00000502987 ADAMTS14Q8WXS8 1223 aa11.09□□□□□ -0.63
SNCA-207ENST00000502987 SKA1Q96BD8 255 aa11.09□□□□□ -0.63
SNCA-207ENST00000502987 MYEOVQ96EZ4 313 aa11.09□□□□□ -0.63
SNCA-207ENST00000502987 SLC39A13Q96H72 371 aa11.09□□□□□ -0.63
SNCA-207ENST00000502987 BTN2A3PQ96KV6 586 aa11.09□□□□□ -0.63
SNCA-207ENST00000502987 FAM81BQ96LP2 452 aa11.09□□□□□ -0.63
SNCA-207ENST00000502987 RSPH9Q9H1X1 276 aaPredicted RBP11.09□□□□□ -0.63
SNCA-207ENST00000502987 PABPC3Q9H361 631 aaKnown RBP11.09□□□□□ -0.63
SNCA-207ENST00000502987 THAP9Q9H5L6 903 aa11.09□□□□□ -0.63
SNCA-207ENST00000502987 ACP6Q9NPH0 428 aa11.09□□□□□ -0.63
SNCA-207ENST00000502987 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.09□□□□□ -0.63
SNCA-207ENST00000502987 XPO7Q9UIA9 1087 aaKnown RBP11.09□□□□□ -0.63
SNCA-207ENST00000502987 INTS6Q9UL03 887 aaKnown RBP11.09□□□□□ -0.63
SNCA-207ENST00000502987 ZFHX4Q86UP3 3567 aa11.09□□□□□ -0.63
SNCA-207ENST00000502987 PTPRBP23467 1997 aa11.08□□□□□ -0.64
SNCA-207ENST00000502987 PLXNA2O75051 1894 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms