RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 SARDHQ9UL12 918 aa5.77□□□□□ -1.49
HMGB1P3-201ENST00000502802 OSGIN2Q9Y236 505 aa5.77□□□□□ -1.49
HMGB1P3-201ENST00000502802 PIAS3Q9Y6X2 628 aa5.77□□□□□ -1.49
HMGB1P3-201ENST00000502802 H0YIZ8 118 aa5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 GTPBP1O00178 669 aaKnown RBP5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 QSOX1O00391 747 aa5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 AP3D1O14617 1153 aa5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 AHCYL1O43865 530 aa5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 CCNT1O60563 726 aaKnown RBP5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 TTLL1O95922 423 aa5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 CYP4B1P13584 511 aa5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 HOXD12P35452 270 aa5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 MLH1P40692 756 aa5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 STAT6P42226 847 aa5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 SLC37A1P57057 533 aa5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 WDR5P61964 334 aaKnown RBP5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 BLOC1S1P78537 153 aa5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 GAB1Q13480 694 aa5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 DCTN2Q13561 401 aaKnown RBP5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 CUL4AQ13619 759 aa5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 BYSLQ13895 437 aaKnown RBP5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 CNGA3Q16281 694 aa5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 KRTAP19-4Q3LI73 84 aa5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 SH2D4BQ5SQS7 431 aa5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 MTFR2Q6P444 385 aa5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 Q6ZNX1 250 aa5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 RHOUQ7L0Q8 258 aa5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 MON1AQ86VX9 555 aa5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 SCN4BQ8IWT1 228 aa5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 PALM2Q8IXS6 379 aa5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 RPAP2Q8IXW5 612 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 KAZALD1Q96I82 304 aa5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 NR1H4Q96RI1 486 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 CDK5RAP1Q96SZ6 601 aaKnown RBP5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 CLSTN3Q9BQT9 956 aa5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 THAP7Q9BT49 309 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 HDHD5Q9BXW7 423 aa5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 ADGRE3Q9BY15 652 aa5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 WDR11Q9BZH6 1224 aa5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 RANBP17Q9H2T7 1088 aaKnown RBP5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 BRF2Q9HAW0 419 aa5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 SEMA5BQ9P283 1151 aa5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 SLC25A13Q9UJS0 675 aa5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 ADAMTS5Q9UNA0 930 aa5.76□□□□□ -1.49
HMGB1P3-201ENST00000502802 SPATA31A1Q5TZJ5 1347 aa5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 NPIPB15A6NHN6 443 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 SYN3O14994 580 aa5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 FYB1O15117 783 aa5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 TNFSF14O43557 240 aa5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 PDE8BO95263 885 aa5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 SGPL1O95470 568 aa5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 MLYCDO95822 493 aa5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 URODP06132 367 aa5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 PKMP14618 531 aaKnown RBP5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 SFPQP23246 707 aaKnown RBP eCLIP5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 FPR3P25089 353 aa5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 COPB1P53618 953 aaKnown RBP5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 EEFSECP57772 596 aaKnown RBP5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 RPS3AP61247 264 aaKnown RBP5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 UFM1P61960 85 aa5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 SHC2P98077 582 aa5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 B4GALNT1Q00973 533 aa5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 GXYLT1Q4G148 440 aa5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 RNASE12Q5GAN4 147 aaKnown RBP5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 TMEM63BQ5T3F8 832 aa5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 CFAP58Q5T655 872 aa5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 UBAP2Q5T6F2 1119 aaKnown RBP5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 KCNV1Q6PIU1 500 aa5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 KLHL24Q6TFL4 600 aa5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 ENOSF1Q7L5Y1 443 aa5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 GALNT7Q86SF2 657 aa5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 LINC01465Q8N7H1 131 aa5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 LSMEM1Q8N8F7 131 aa5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 USP6NLQ92738 828 aa5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 NSUN4Q96CB9 384 aaKnown RBP5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 SAAL1Q96ER3 474 aa5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 GPR78Q96P69 363 aa5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 PLEKHG4BQ96PX9 1271 aa5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 NPLQ9BXD5 320 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 SYNCQ9H7C4 482 aa5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 TTC12Q9H892 705 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 SEPT11Q9NVA2 429 aaKnown RBP5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 BCCIPQ9P287 314 aaKnown RBP eCLIP5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 CNOT11Q9UKZ1 510 aaKnown RBP5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 CECR2Q9BXF3 1484 aa5.75□□□□□ -1.49
HMGB1P3-201ENST00000502802 K7ESM1 405 aa5.74□□□□□ -1.49
HMGB1P3-201ENST00000502802 DSCR3O14972 297 aa5.74□□□□□ -1.49
HMGB1P3-201ENST00000502802 PER2O15055 1255 aa5.74□□□□□ -1.49
HMGB1P3-201ENST00000502802 ORC4O43929 436 aa5.74□□□□□ -1.49
HMGB1P3-201ENST00000502802 CCNDBP1O95273 360 aa5.74□□□□□ -1.49
HMGB1P3-201ENST00000502802 C1SP09871 688 aa5.74□□□□□ -1.49
HMGB1P3-201ENST00000502802 ALDOCP09972 364 aaKnown RBP5.74□□□□□ -1.49
HMGB1P3-201ENST00000502802 APEHP13798 732 aaKnown RBP5.74□□□□□ -1.49
HMGB1P3-201ENST00000502802 COX7A2P14406 83 aa5.74□□□□□ -1.49
HMGB1P3-201ENST00000502802 NDUFS1P28331 727 aa5.74□□□□□ -1.49
HMGB1P3-201ENST00000502802 ABCD1P33897 745 aa5.74□□□□□ -1.49
HMGB1P3-201ENST00000502802 GRIA3P42263 894 aa5.74□□□□□ -1.49
HMGB1P3-201ENST00000502802 RARSP54136 660 aaKnown RBP5.74□□□□□ -1.49
HMGB1P3-201ENST00000502802 RILPL1Q5EBL4 403 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms