RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 C7orf72A4D263 438 aa5.93□□□□□ -1.46
SOX2-OT-218ENST00000498731 ARHGAP42A6NI28 874 aa5.93□□□□□ -1.46
SOX2-OT-218ENST00000498731 NOP56O00567 594 aaKnown RBP5.93□□□□□ -1.46
SOX2-OT-218ENST00000498731 STRNO43815 780 aa5.93□□□□□ -1.46
SOX2-OT-218ENST00000498731 TYROBPO43914 113 aa5.93□□□□□ -1.46
SOX2-OT-218ENST00000498731 KDM1AO60341 852 aa5.93□□□□□ -1.46
SOX2-OT-218ENST00000498731 PSMD10O75832 226 aa5.93□□□□□ -1.46
SOX2-OT-218ENST00000498731 RSL1D1O76021 490 aaKnown RBP5.93□□□□□ -1.46
SOX2-OT-218ENST00000498731 SEC24DO94855 1032 aaPredicted RBP5.93□□□□□ -1.46
SOX2-OT-218ENST00000498731 CRYZL1O95825 349 aa5.93□□□□□ -1.46
SOX2-OT-218ENST00000498731 IDUAP35475 653 aa5.93□□□□□ -1.46
SOX2-OT-218ENST00000498731 POLD2P49005 469 aa5.93□□□□□ -1.46
SOX2-OT-218ENST00000498731 ZBTB16Q05516 673 aa5.93□□□□□ -1.46
SOX2-OT-218ENST00000498731 ADRM1Q16186 407 aa5.93□□□□□ -1.46
SOX2-OT-218ENST00000498731 ASIC2Q16515 512 aa5.93□□□□□ -1.46
SOX2-OT-218ENST00000498731 SPDYCQ5MJ68 293 aa5.93□□□□□ -1.46
SOX2-OT-218ENST00000498731 HYIQ5T013 277 aa5.93□□□□□ -1.46
SOX2-OT-218ENST00000498731 DENND5BQ6ZUT9 1274 aa5.93□□□□□ -1.46
SOX2-OT-218ENST00000498731 NET1Q7Z628 596 aaPredicted RBP5.93□□□□□ -1.46
SOX2-OT-218ENST00000498731 IGFN1Q86VF2 1251 aa5.93□□□□□ -1.46
SOX2-OT-218ENST00000498731 SUN5Q8TC36 379 aa5.93□□□□□ -1.46
SOX2-OT-218ENST00000498731 MAP6Q96JE9 813 aa5.93□□□□□ -1.46
SOX2-OT-218ENST00000498731 CLSTN3Q9BQT9 956 aa5.93□□□□□ -1.46
SOX2-OT-218ENST00000498731 SCUBE2Q9NQ36 999 aa5.93□□□□□ -1.46
SOX2-OT-218ENST00000498731 PXMP2Q9NR77 195 aa5.93□□□□□ -1.46
SOX2-OT-218ENST00000498731 NUDT5Q9UKK9 219 aa5.93□□□□□ -1.46
SOX2-OT-218ENST00000498731 RPL26L1Q9UNX3 145 aaKnown RBP5.93□□□□□ -1.46
SOX2-OT-218ENST00000498731 ERVK-11Q9UQG0 969 aa5.93□□□□□ -1.46
SOX2-OT-218ENST00000498731 UGT2A1Q9Y4X1 527 aa5.93□□□□□ -1.46
SOX2-OT-218ENST00000498731 CYP3A7-CYP3A51PA0A087WV96 503 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 LINC00854A0A1B0GVQ3 168 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 HOXC11O43248 304 aaPredicted RBP5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 NDUFS2O75306 463 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 USP2O75604 605 aaPredicted RBP5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 AKAP3O75969 853 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 ITGBL1O95965 494 aaPredicted RBP5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 P4HA1P13674 534 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 BGNP21810 368 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 CYP3A7P24462 503 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 ARNTP27540 789 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 PHBP35232 272 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 GRIA1P42261 906 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 GCLMP48507 274 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 CDK9P50750 372 aaKnown RBP5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 GTF2A2P52657 109 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 EIF3EP60228 445 aaKnown RBP5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 FPGSQ05932 587 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 PPATQ06203 517 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 UGCGQ16739 394 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 SMU1Q2TAY7 513 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 ALFQ53S48 1182 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 AARS2Q5JTZ9 985 aaKnown RBP5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 PXDC1Q5TGL8 231 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 CST9Q5W186 159 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 NIPAL1Q6NVV3 410 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 STRA8Q7Z7C7 330 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 OR2T3Q8NH03 318 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 RAB3IL1Q8TBN0 382 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 BHMTQ93088 406 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 TMEM143Q96AN5 459 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 GRAMD1AQ96CP6 724 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 OXNAD1Q96HP4 312 aaPredicted RBP5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 MAGED4Q96JG8 741 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 C17orf75Q9HAS0 396 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 PALMDQ9NP74 551 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 TXNDC16Q9P2K2 825 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 FBXO10Q9UK96 956 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 A8MXQ7 604 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 WDR64B1ANS9 1081 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 H7C0C1 242 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 AGRPO00253 132 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 NDC80O14777 642 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 JRKO75564 520 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 TOP3BO95985 862 aaKnown RBP5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 CYP2C8P10632 490 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 KRT4P19013 534 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 FGFR3P22607 806 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 ALDH1A3P47895 512 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 PCYT1AP49585 367 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 CDK16Q00536 496 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 OTUD4Q01804 1114 aaKnown RBP5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 SPIRE1Q08AE8 756 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 ACAP2Q15057 778 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 NR6A1Q15406 480 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 TMEM26Q6ZUK4 368 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 USP50Q70EL3 339 aaPredicted RBP5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 LYSMD3Q7Z3D4 306 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 THNSL2Q86YJ6 484 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 GALNT13Q8IUC8 556 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 RNF148Q8N7C7 305 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 NPLOC4Q8TAT6 608 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 POMGNT1Q8WZA1 660 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 HDAC2Q92769 488 aaKnown RBP5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 SLC5A5Q92911 643 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 UROC1Q96N76 676 aa5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 MRPS26Q9BYN8 205 aaKnown RBP5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 GBA2Q9HCG7 927 aaPredicted RBP5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 AGO4Q9HCK5 861 aaKnown RBP5.92□□□□□ -1.46
SOX2-OT-218ENST00000498731 DNAJC28Q9NX36 388 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms