RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 HBS1LQ9Y450 684 aaKnown RBP9.47□□□□□ -0.89
CCDC171-209ENST00000498725 ARID1BQ8NFD5 2236 aaPredicted RBP9.46□□□□□ -0.89
CCDC171-209ENST00000498725 YJEFN3A6XGL0 299 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 E7ENQ6 273 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 RTN2O75298 545 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 CSO75390 466 aaKnown RBP9.46□□□□□ -0.9
CCDC171-209ENST00000498725 CENPBP07199 599 aaPredicted RBP9.46□□□□□ -0.9
CCDC171-209ENST00000498725 SLFN14P0C7P3 912 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 PDIA4P13667 645 aaKnown RBP9.46□□□□□ -0.9
CCDC171-209ENST00000498725 LCP1P13796 627 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 VAV1P15498 845 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 GOT1P17174 413 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 ACP1P24666 158 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 STK19P49842 368 aaPredicted RBP9.46□□□□□ -0.9
CCDC171-209ENST00000498725 RAD23BP54727 409 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 UCNP55089 124 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 SLC8A3P57103 927 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 RPS24P62847 133 aaKnown RBP9.46□□□□□ -0.9
CCDC171-209ENST00000498725 E2F1Q01094 437 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 PPP3CAQ08209 521 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 VAC14Q08AM6 782 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 STK4Q13043 487 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 ILKQ13418 452 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 STAT4Q14765 748 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 PROX2Q3B8N5 592 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 HS1BP3Q53T59 392 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 FSCBQ5H9T9 825 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 RAB41Q5JT25 222 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 C9orf64Q5T6V5 341 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 PIK3R6Q5UE93 754 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 RNF219Q5W0B1 726 aaPredicted RBP9.46□□□□□ -0.9
CCDC171-209ENST00000498725 NAPEPLDQ6IQ20 393 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 CNNM4Q6P4Q7 775 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 BHLHA9Q7RTU4 235 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 PRPF39Q86UA1 669 aaKnown RBP9.46□□□□□ -0.9
CCDC171-209ENST00000498725 OXR1Q8N573 874 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 SLC4A11Q8NBS3 891 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 LINC00301Q8NCQ3 95 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 UBA3Q8TBC4 463 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 MYEOVQ96EZ4 313 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 VCPIP1Q96JH7 1222 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 MRGPRX3Q96LB0 322 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 ZNF578Q96N58 590 aaPredicted RBP9.46□□□□□ -0.9
CCDC171-209ENST00000498725 FAM129BQ96TA1 746 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 UCKL1Q9NWZ5 548 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 SLCO3A1Q9UIG8 710 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 FZD4Q9ULV1 537 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 MAST4O15021 2626 aa9.46□□□□□ -0.9
CCDC171-209ENST00000498725 EDDM13A0A1B0GTR0 161 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 IKBKBO14920 756 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 OPA1O60313 960 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 ACSL4O60488 711 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 CUTAO60888 179 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 MOCS2O96007 188 aaPredicted RBP9.45□□□□□ -0.9
CCDC171-209ENST00000498725 ADH1BP00325 375 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 ASLP04424 464 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 KRT13P13646 458 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 CD19P15391 556 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 RXRGP48443 463 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 SLC11A2P49281 568 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 NASPP49321 788 aaPredicted RBP9.45□□□□□ -0.9
CCDC171-209ENST00000498725 RGS7P49802 495 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 ZNF445P59923 1031 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 NFATC3Q12968 1075 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 CDH18Q13634 790 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 PKDCCQ504Y2 493 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 FAM133BQ5BKY9 247 aaKnown RBP9.45□□□□□ -0.9
CCDC171-209ENST00000498725 C3orf38Q5JPI3 329 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 PITRM1Q5JRX3 1037 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 PM20D1Q6GTS8 502 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 NADSYN1Q6IA69 706 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 CCDC117Q8IWD4 279 aaPredicted RBP9.45□□□□□ -0.9
CCDC171-209ENST00000498725 APCDD1Q8J025 514 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 SIX6OS1Q8N1H7 587 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 SLC25A45Q8N413 288 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 MFSD2AQ8NA29 543 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 ANKRD52Q8NB46 1076 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 HJURPQ8NCD3 748 aaPredicted RBP9.45□□□□□ -0.9
CCDC171-209ENST00000498725 KIAA0895Q8NCT3 520 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 RFFLQ8WZ73 363 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 TTC9Q92623 222 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 TTC17Q96AE7 1141 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 HIC2Q96JB3 615 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 PRICKLE1Q96MT3 831 aaPredicted RBP9.45□□□□□ -0.9
CCDC171-209ENST00000498725 DEPDC7Q96QD5 511 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 ABCG4Q9H172 646 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 KCTD10Q9H3F6 313 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 ERVMER34-1Q9H9K5 563 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 CISHQ9NSE2 258 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 SERTAD1Q9UHV2 236 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 TSPAN16Q9UKR8 245 aa9.45□□□□□ -0.9
CCDC171-209ENST00000498725 A0A1B0GVM2 712 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 PVALEFA0A1B0GWK0 134 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 TARSL2A2RTX5 802 aaKnown RBP9.44□□□□□ -0.9
CCDC171-209ENST00000498725 TYW5A2RUC4 315 aaKnown RBP9.44□□□□□ -0.9
CCDC171-209ENST00000498725 PDXKO00764 312 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 SLC31A1O15431 190 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 KLRC4O43908 158 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 BNIP3LO60238 219 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 MOCS3O95396 460 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms