RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 SMIM28A0A1B0GU29 152 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 CTAGE15A4D2H0 777 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 EFCAB8A8MWE9 144 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 ZNF623O75123 536 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 PALMO75781 387 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 RECQL4O94761 1208 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 LSM8O95777 96 aaKnown RBP5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 CYP1A1P04798 512 aaPredicted RBP5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 ATP1A1P05023 1023 aaKnown RBP5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 ASGR2P07307 311 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 PFKMP08237 780 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 CTSHP09668 335 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 WEE2P0C1S8 567 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 FAM163BP0C2L3 166 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 CTAGE8P0CG41 777 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 VDRP11473 427 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 CD58P19256 250 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 ABCB4P21439 1286 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 PAX3P23760 479 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 AKAP5P24588 427 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 PAFAH1B1P43034 410 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 NSFP46459 744 aaKnown RBP5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 ZNF132P52740 706 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 ATXN1P54253 815 aaKnown RBP5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 HADHBP55084 474 aaKnown RBP5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 DEFB103AP81534 67 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 BFSP2Q13515 415 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 RPS6KA1Q15418 735 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 STILQ15468 1287 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 SV2CQ496J9 727 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 FBXO47Q5MNV8 452 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 SNAP47Q5SQN1 464 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 DNAJC14Q6Y2X3 702 aaPredicted RBP5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 DPH6Q7L8W6 267 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 MRPL10Q7Z7H8 261 aaKnown RBP5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 B3GNT8Q7Z7M8 397 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 CTAGE6Q86UF2 777 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 ZNF761Q86XN6 746 aaPredicted RBP5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 CTAGE4Q8IX94 777 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 UBR7Q8N806 425 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 TMEM35BQ8NCS4 154 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 MSANTD4Q8NCY6 345 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 SLC35G2Q8TBE7 412 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 CAGE1Q8TC20 777 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 ZNF606Q8WXB4 792 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 UBXN4Q92575 508 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 TMEM176AQ96HP8 235 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 RHOVQ96L33 236 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 RPS6KC1Q96S38 1066 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 MMS19Q96T76 1030 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 PCDHB18PQ96TA0 734 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 SELENOOQ9BVL4 669 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 CARD6Q9BX69 1037 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 NXF3Q9H4D5 531 aaKnown RBP5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 MRPL47Q9HD33 250 aaKnown RBP5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 ERVK-5Q9HDB9 667 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 SLC38A7Q9NVC3 462 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 NTMQ9P121 344 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 CTTNBP2NLQ9P2B4 639 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 LCMT1Q9UIC8 334 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 SIX4Q9UIU6 781 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 GTF3C4Q9UKN8 822 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 FBXL21Q9UKT6 434 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 AMFRQ9UKV5 643 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 PADI3Q9ULW8 664 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 SNX12Q9UMY4 172 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 PCDHB12Q9Y5F1 795 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 CITO14578 2027 aa5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 SPEGQ15772 3267 aa5.57□□□□□ -1.52
HMGXB4-208ENST00000498325 GRID2IPA4D2P6 1211 aa5.57□□□□□ -1.52
HMGXB4-208ENST00000498325 MIF4GDA9UHW6 222 aaKnown RBP5.57□□□□□ -1.52
HMGXB4-208ENST00000498325 PIRO00625 290 aa5.57□□□□□ -1.52
HMGXB4-208ENST00000498325 CES2O00748 559 aa5.57□□□□□ -1.52
HMGXB4-208ENST00000498325 LINC01565O15544 149 aa5.57□□□□□ -1.52
HMGXB4-208ENST00000498325 MEFVO15553 781 aaPredicted RBP5.57□□□□□ -1.52
HMGXB4-208ENST00000498325 CTIFO43310 598 aaKnown RBP5.57□□□□□ -1.52
HMGXB4-208ENST00000498325 HUS1O60921 280 aa5.57□□□□□ -1.52
HMGXB4-208ENST00000498325 TBX10O75333 385 aa5.57□□□□□ -1.52
HMGXB4-208ENST00000498325 MTA2O94776 668 aa5.57□□□□□ -1.52
HMGXB4-208ENST00000498325 LMNAP02545 664 aaKnown RBP5.57□□□□□ -1.52
HMGXB4-208ENST00000498325 CYP1A2P05177 515 aa5.57□□□□□ -1.52
HMGXB4-208ENST00000498325 CALB1P05937 261 aa5.57□□□□□ -1.52
HMGXB4-208ENST00000498325 THP07101 528 aa5.57□□□□□ -1.52
HMGXB4-208ENST00000498325 GHRP10912 638 aa5.57□□□□□ -1.52
HMGXB4-208ENST00000498325 CKBP12277 381 aa5.57□□□□□ -1.52
HMGXB4-208ENST00000498325 UNGP13051 313 aaPredicted RBP5.57□□□□□ -1.52
HMGXB4-208ENST00000498325 CD19P15391 556 aa5.57□□□□□ -1.52
HMGXB4-208ENST00000498325 LRPAP1P30533 357 aa5.57□□□□□ -1.52
HMGXB4-208ENST00000498325 CD52P31358 61 aa5.57□□□□□ -1.52
HMGXB4-208ENST00000498325 GBP2P32456 591 aaPredicted RBP5.57□□□□□ -1.52
HMGXB4-208ENST00000498325 RPL9P32969 192 aaKnown RBP5.57□□□□□ -1.52
HMGXB4-208ENST00000498325 TAF6P49848 677 aa5.57□□□□□ -1.52
HMGXB4-208ENST00000498325 SNX16P57768 344 aa5.57□□□□□ -1.52
HMGXB4-208ENST00000498325 WDR5P61964 334 aaKnown RBP5.57□□□□□ -1.52
HMGXB4-208ENST00000498325 GABPB1Q06547 395 aaPredicted RBP5.57□□□□□ -1.52
HMGXB4-208ENST00000498325 SMAD4Q13485 552 aaKnown RBP5.57□□□□□ -1.52
HMGXB4-208ENST00000498325 LPIN1Q14693 890 aa5.57□□□□□ -1.52
HMGXB4-208ENST00000498325 CNGA2Q16280 664 aa5.57□□□□□ -1.52
HMGXB4-208ENST00000498325 TCTN1Q2MV58 587 aa5.57□□□□□ -1.52
HMGXB4-208ENST00000498325 TRIM71Q2Q1W2 868 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms