RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 LONRF1Q17RB8 773 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 DNAJC21Q5F1R6 531 aaKnown RBP8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 ANKRD20A2Q5SQ80 823 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 SYCP2LQ5T4T6 812 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 ANKRD20A1Q5TYW2 823 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 ANKRD20A3Q5VUR7 823 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 NUGGCQ68CJ6 796 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 UBE2Q1Q7Z7E8 422 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 ANKMY2Q8IV38 441 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 DEPDC1BQ8WUY9 529 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 AUTS2Q8WXX7 1259 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 BADQ92934 168 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 P2RY11Q96G91 374 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 SLC39A13Q96H72 371 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 CELF6Q96J87 481 aaKnown RBP8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 BTN2A3PQ96KV6 586 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 ZNF512Q96ME7 567 aaPredicted RBP8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 SERPINB12Q96P63 405 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 ZBED2Q9BTP6 218 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 CEP41Q9BYV8 373 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 UBE2OQ9C0C9 1292 aaKnown RBP8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 BRD8Q9H0E9 1235 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 CCSER2Q9H7U1 834 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 LRRC4CQ9HCJ2 640 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 MRPL17Q9NRX2 175 aaKnown RBP8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 BCCIPQ9P287 314 aaKnown RBP eCLIP8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 STK39Q9UEW8 545 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 INSL5Q9Y5Q6 135 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 TLDC2A0PJX2 215 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 KCNU1A8MYU2 1149 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 FGF18O76093 207 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 ABLIM3O94929 683 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 CPP00450 1065 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 IGLV3-27P01718 113 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 FGBP02675 491 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 ZDHHC11BP0C7U3 371 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 ATP2A2P16615 1042 aaKnown RBP8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 EN2P19622 333 aaPredicted RBP8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 PTPN3P26045 913 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 ATP5DP30049 168 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 CTNNB1P35222 781 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 HTRA4P83105 476 aaPredicted RBP8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 RING1Q06587 406 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 TWF1Q12792 350 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 MTA1Q13330 715 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 MTM1Q13496 603 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 RAB33AQ14088 237 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 STAT4Q14765 748 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 TMED2Q15363 201 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 SKIDA1Q1XH10 827 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 CCDC38Q502W7 563 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 MS4A13Q5J8X5 152 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 HP1BP3Q5SSJ5 553 aaPredicted RBP8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 FNBP1LQ5T0N5 605 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 FAM182AQ5T1J6 154 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 RASIP1Q5U651 963 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 RAP1GAP2Q684P5 730 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 ITPRIPL1Q6GPH6 555 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 LRRC31Q6UY01 552 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 KDM7AQ6ZMT4 941 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 TP53INP2Q8IXH6 220 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 RIBC1Q8N443 379 aaPredicted RBP8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 LZTR1Q8N653 840 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 ARFGAP2Q8N6H7 521 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 RTL3Q8N8U3 475 aaKnown RBP8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 FBXO36Q8NEA4 188 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 ZNF461Q8TAF7 563 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 PYROXD1Q8WU10 500 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 CFAP36Q96G28 342 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 TRMT2BQ96GJ1 504 aaKnown RBP8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 SELENOSQ9BQE4 189 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 CCDC77Q9BR77 488 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 WDR83Q9BRX9 315 aaKnown RBP8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 TMEM109Q9BVC6 243 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 GBA3Q9H227 469 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 MTIF3Q9H2K0 278 aaKnown RBP8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 ETNK1Q9HBU6 452 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 EIF2B3Q9NR50 452 aaKnown RBP8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 TRPM5Q9NZQ8 1165 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 FNIP2Q9P278 1114 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 UXTQ9UBK9 157 aaPredicted RBP8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 RSPH14Q9UHP6 348 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 SLC12A6Q9UHW9 1150 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 VANGL2Q9ULK5 521 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 NOVA2Q9UNW9 492 aaKnown RBP8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 SSX2IPQ9Y2D8 614 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 HBS1LQ9Y450 684 aaKnown RBP8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 NR2E3Q9Y5X4 410 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 COL4A3Q01955 1670 aa8.29□□□□□ -1.08
PDZRN3-212ENST00000498048 F5H5T6 163 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 KCNK1O00180 336 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 CDH16O75309 829 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 SPAG6O75602 509 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 NEBLO76041 1014 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 CSPG5O95196 566 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 METTL18O95568 372 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 TBX18O95935 607 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 AGTP01019 485 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 ADH1AP07327 375 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 CTSAP10619 480 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms