RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 ATPAF2Q8N5M1 289 aa18.27■□□□□ 0.51
CHRNA4-206ENST00000498043 RAD9AQ99638 391 aa18.27■□□□□ 0.51
CHRNA4-206ENST00000498043 TMEM109Q9BVC6 243 aa18.27■□□□□ 0.51
CHRNA4-206ENST00000498043 NOVA2Q9UNW9 492 aaKnown RBP18.27■□□□□ 0.51
CHRNA4-206ENST00000498043 CLUHO75153 1309 aa18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 DOCK4Q8N1I0 1966 aa18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 EIF3HO15372 352 aaKnown RBP eCLIP18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 ABHD2P08910 425 aa18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 CTNNB1P35222 781 aa18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 LMAN1P49257 510 aa18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 EPHB3P54753 998 aa18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 AGBL2Q5U5Z8 902 aa18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 SNX30Q5VWJ9 437 aa18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 LRRC31Q6UY01 552 aa18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 CHSY1Q86X52 802 aa18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 HERVK_113Q902F9 699 aa18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 TRMT2BQ96GJ1 504 aaKnown RBP18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 BRD8Q9H0E9 1235 aa18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 RXFP1Q9HBX9 757 aa18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 ALG13Q9NP73 1137 aaKnown RBP18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 CTNNAL1Q9UBT7 734 aa18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 STK39Q9UEW8 545 aa18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 OBSL1O75147 1896 aa18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 ANAPC1Q9H1A4 1944 aa18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 A0A087WUV0 522 aaPredicted RBP18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 C2orf78A6NCI8 922 aa18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 RGS16O15492 202 aaPredicted RBP18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 TGM5O43548 720 aa18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 CNTN5O94779 1100 aa18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 TPSB2P20231 275 aa18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 NR1D1P20393 614 aa18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 FDFT1P37268 417 aa18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 ELK3P41970 407 aa18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 GABPB1Q06547 395 aaPredicted RBP18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 TPSAB1Q15661 275 aa18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 ALFQ53S48 1182 aa18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 NUGGCQ68CJ6 796 aa18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 NADSYN1Q6IA69 706 aa18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 ZNF534Q76KX8 674 aa18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 PID1Q7Z2X4 250 aa18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 DNAJB7Q7Z6W7 309 aaPredicted RBP18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 CAND1Q86VP6 1230 aaKnown RBP18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 NLRP14Q86W24 1093 aa18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 CIR1Q86X95 450 aaPredicted RBP18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 AGGF1Q8N302 714 aaeCLIP18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 SP7Q8TDD2 431 aaPredicted RBP18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 ZYG11BQ9C0D3 744 aa18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 SLC39A8Q9C0K1 460 aa18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 PRDM10Q9NQV6 1147 aa18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 HBS1LQ9Y450 684 aaKnown RBP18.26■□□□□ 0.51
CHRNA4-206ENST00000498043 GOLGA6L7A0A1B0GV03 622 aa18.25■□□□□ 0.51
CHRNA4-206ENST00000498043 SSTR1P30872 391 aa18.25■□□□□ 0.51
CHRNA4-206ENST00000498043 KPNA1P52294 538 aaPredicted RBP18.25■□□□□ 0.51
CHRNA4-206ENST00000498043 GPX6P59796 221 aa18.25■□□□□ 0.51
CHRNA4-206ENST00000498043 MAGOHP61326 146 aaKnown RBP18.25■□□□□ 0.51
CHRNA4-206ENST00000498043 COG7P83436 770 aa18.25■□□□□ 0.51
CHRNA4-206ENST00000498043 FBXL22Q6P050 247 aa18.25■□□□□ 0.51
CHRNA4-206ENST00000498043 IGDCC3Q8IVU1 814 aa18.25■□□□□ 0.51
CHRNA4-206ENST00000498043 LZTR1Q8N653 840 aa18.25■□□□□ 0.51
CHRNA4-206ENST00000498043 ATP11CQ8NB49 1132 aa18.25■□□□□ 0.51
CHRNA4-206ENST00000498043 IGSF8Q969P0 613 aa18.25■□□□□ 0.51
CHRNA4-206ENST00000498043 PSMG2Q969U7 264 aa18.25■□□□□ 0.51
CHRNA4-206ENST00000498043 PGM2Q96G03 612 aa18.25■□□□□ 0.51
CHRNA4-206ENST00000498043 AGAP3Q96P47 875 aa18.25■□□□□ 0.51
CHRNA4-206ENST00000498043 TCF25Q9BQ70 676 aa18.25■□□□□ 0.51
CHRNA4-206ENST00000498043 ENTPD7Q9NQZ7 604 aa18.25■□□□□ 0.51
CHRNA4-206ENST00000498043 MTSS1O43312 755 aa18.24■□□□□ 0.51
CHRNA4-206ENST00000498043 CXCL14O95715 111 aa18.24■□□□□ 0.51
CHRNA4-206ENST00000498043 GRIA1P42261 906 aa18.24■□□□□ 0.51
CHRNA4-206ENST00000498043 ATP1A2P50993 1020 aa18.24■□□□□ 0.51
CHRNA4-206ENST00000498043 C6orf118Q5T5N4 469 aa18.24■□□□□ 0.51
CHRNA4-206ENST00000498043 CROCCP2Q86T23 111 aa18.24■□□□□ 0.51
CHRNA4-206ENST00000498043 GPR65Q8IYL9 337 aa18.24■□□□□ 0.51
CHRNA4-206ENST00000498043 PDCD7Q8N8D1 485 aaKnown RBP18.24■□□□□ 0.51
CHRNA4-206ENST00000498043 RPRD1AQ96P16 312 aaPredicted RBP18.24■□□□□ 0.51
CHRNA4-206ENST00000498043 PRMT1Q99873 361 aaKnown RBP18.24■□□□□ 0.51
CHRNA4-206ENST00000498043 ROPN1BQ9BZX4 212 aaPredicted RBP18.24■□□□□ 0.51
CHRNA4-206ENST00000498043 ROPN1Q9HAT0 212 aaPredicted RBP18.24■□□□□ 0.51
CHRNA4-206ENST00000498043 ZNF334Q9HCZ1 680 aaPredicted RBP18.24■□□□□ 0.51
CHRNA4-206ENST00000498043 SSX2IPQ9Y2D8 614 aa18.24■□□□□ 0.51
CHRNA4-206ENST00000498043 CHD7Q9P2D1 2997 aa18.24■□□□□ 0.51
CHRNA4-206ENST00000498043 IGLV3-10A0A075B6K4 115 aa18.24■□□□□ 0.51
CHRNA4-206ENST00000498043 EXOC1LA0A1B0GW35 172 aa18.24■□□□□ 0.51
CHRNA4-206ENST00000498043 ZBTB24O43167 697 aaPredicted RBP18.24■□□□□ 0.51
CHRNA4-206ENST00000498043 ZNF189O75820 626 aaPredicted RBP18.24■□□□□ 0.51
CHRNA4-206ENST00000498043 IVLP07476 585 aa18.24■□□□□ 0.51
CHRNA4-206ENST00000498043 PPARDQ03181 441 aa18.24■□□□□ 0.51
CHRNA4-206ENST00000498043 STAT4Q14765 748 aa18.24■□□□□ 0.51
CHRNA4-206ENST00000498043 PARP6Q2NL67 630 aa18.24■□□□□ 0.51
CHRNA4-206ENST00000498043 CCDC38Q502W7 563 aa18.24■□□□□ 0.51
CHRNA4-206ENST00000498043 ZNF276Q8N554 614 aa18.24■□□□□ 0.51
CHRNA4-206ENST00000498043 MCUQ8NE86 351 aa18.24■□□□□ 0.51
CHRNA4-206ENST00000498043 USP33Q8TEY7 942 aa18.24■□□□□ 0.51
CHRNA4-206ENST00000498043 TLCD1Q96CP7 247 aa18.24■□□□□ 0.51
CHRNA4-206ENST00000498043 MYEOVQ96EZ4 313 aa18.24■□□□□ 0.51
CHRNA4-206ENST00000498043 FRMD8Q9BZ67 464 aaPredicted RBP18.24■□□□□ 0.51
CHRNA4-206ENST00000498043 PPARGC1AQ9UBK2 798 aaKnown RBP18.24■□□□□ 0.51
CHRNA4-206ENST00000498043 RSPH14Q9UHP6 348 aa18.24■□□□□ 0.51
CHRNA4-206ENST00000498043 TEX264Q9Y6I9 313 aa18.24■□□□□ 0.51
CHRNA4-206ENST00000498043 WASH4PA8MWX3 477 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms