RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 MPP1Q00013 466 aa4.46□□□□□ -1.7
SMC4-225ENST00000497203 GOLGA8FQ08AF8 430 aa4.46□□□□□ -1.7
SMC4-225ENST00000497203 TBL3Q12788 808 aaKnown RBP4.46□□□□□ -1.7
SMC4-225ENST00000497203 SLC10A2Q12908 348 aaPredicted RBP4.46□□□□□ -1.7
SMC4-225ENST00000497203 KCNB1Q14721 858 aa4.46□□□□□ -1.7
SMC4-225ENST00000497203 WDR45BQ5MNZ6 344 aa4.46□□□□□ -1.7
SMC4-225ENST00000497203 LIPMQ5VYY2 423 aa4.46□□□□□ -1.7
SMC4-225ENST00000497203 FAAH2Q6GMR7 532 aa4.46□□□□□ -1.7
SMC4-225ENST00000497203 SERPINA13PQ6UXR4 307 aa4.46□□□□□ -1.7
SMC4-225ENST00000497203 KYAT3Q6YP21 454 aaKnown RBP4.46□□□□□ -1.7
SMC4-225ENST00000497203 ZNF66Q6ZN08 573 aa4.46□□□□□ -1.7
SMC4-225ENST00000497203 DCDC5Q6ZRR9 648 aa4.46□□□□□ -1.7
SMC4-225ENST00000497203 LRRC8DQ7L1W4 858 aa4.46□□□□□ -1.7
SMC4-225ENST00000497203 CHSY1Q86X52 802 aa4.46□□□□□ -1.7
SMC4-225ENST00000497203 ENDOVQ8N8Q3 282 aaKnown RBP4.46□□□□□ -1.7
SMC4-225ENST00000497203 PCYOX1LQ8NBM8 494 aa4.46□□□□□ -1.7
SMC4-225ENST00000497203 ADAMTS18Q8TE60 1221 aa4.46□□□□□ -1.7
SMC4-225ENST00000497203 SH3KBP1Q96B97 665 aa4.46□□□□□ -1.7
SMC4-225ENST00000497203 KAZALD1Q96I82 304 aa4.46□□□□□ -1.7
SMC4-225ENST00000497203 SENP7Q9BQF6 1050 aa4.46□□□□□ -1.7
SMC4-225ENST00000497203 TRIM2Q9C040 744 aa4.46□□□□□ -1.7
SMC4-225ENST00000497203 RMI1Q9H9A7 625 aa4.46□□□□□ -1.7
SMC4-225ENST00000497203 SFXN1Q9H9B4 322 aa4.46□□□□□ -1.7
SMC4-225ENST00000497203 PRDM16Q9HAZ2 1276 aa4.46□□□□□ -1.7
SMC4-225ENST00000497203 SEMA5BQ9P283 1151 aa4.46□□□□□ -1.7
SMC4-225ENST00000497203 SIRT4Q9Y6E7 314 aaPredicted RBP4.46□□□□□ -1.7
SMC4-225ENST00000497203 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.45□□□□□ -1.7
SMC4-225ENST00000497203 GRM8O00222 908 aa4.45□□□□□ -1.7
SMC4-225ENST00000497203 CCNT1O60563 726 aaKnown RBP4.45□□□□□ -1.7
SMC4-225ENST00000497203 LATS1O95835 1130 aa4.45□□□□□ -1.7
SMC4-225ENST00000497203 CSF1P09603 554 aa4.45□□□□□ -1.7
SMC4-225ENST00000497203 TNFAIP3P21580 790 aa4.45□□□□□ -1.7
SMC4-225ENST00000497203 HOXD12P35452 270 aa4.45□□□□□ -1.7
SMC4-225ENST00000497203 PGM1P36871 562 aa4.45□□□□□ -1.7
SMC4-225ENST00000497203 CASP2P42575 452 aa4.45□□□□□ -1.7
SMC4-225ENST00000497203 AGTR2P50052 363 aa4.45□□□□□ -1.7
SMC4-225ENST00000497203 TUBA4AP68366 448 aa4.45□□□□□ -1.7
SMC4-225ENST00000497203 CDK18Q07002 472 aa4.45□□□□□ -1.7
SMC4-225ENST00000497203 LMOD3Q0VAK6 560 aa4.45□□□□□ -1.7
SMC4-225ENST00000497203 LARS2Q15031 903 aaKnown RBP4.45□□□□□ -1.7
SMC4-225ENST00000497203 RUNDC3AQ59EK9 446 aa4.45□□□□□ -1.7
SMC4-225ENST00000497203 HEATR4Q86WZ0 1026 aa4.45□□□□□ -1.7
SMC4-225ENST00000497203 TCP11L2Q8N4U5 519 aa4.45□□□□□ -1.7
SMC4-225ENST00000497203 PNLDC1Q8NA58 520 aaKnown RBP4.45□□□□□ -1.7
SMC4-225ENST00000497203 LINS1Q8NG48 757 aa4.45□□□□□ -1.7
SMC4-225ENST00000497203 CLEC4CQ8WTT0 213 aa4.45□□□□□ -1.7
SMC4-225ENST00000497203 NOC3LQ8WTT2 800 aaKnown RBP4.45□□□□□ -1.7
SMC4-225ENST00000497203 ZNF845Q96IR2 970 aaPredicted RBP4.45□□□□□ -1.7
SMC4-225ENST00000497203 RITA1Q96K30 269 aa4.45□□□□□ -1.7
SMC4-225ENST00000497203 ASIC5Q9NY37 505 aa4.45□□□□□ -1.7
SMC4-225ENST00000497203 RCE1Q9Y256 329 aa4.45□□□□□ -1.7
SMC4-225ENST00000497203 ITIH6Q6UXX5 1313 aa4.45□□□□□ -1.7
SMC4-225ENST00000497203 LMTK3Q96Q04 1460 aa4.44□□□□□ -1.7
SMC4-225ENST00000497203 TCRBV5S1A1TA0A578 114 aa4.44□□□□□ -1.7
SMC4-225ENST00000497203 PEX12O00623 359 aa4.44□□□□□ -1.7
SMC4-225ENST00000497203 CELA2AP08217 269 aa4.44□□□□□ -1.7
SMC4-225ENST00000497203 HNRNPA1P09651 372 aaKnown RBP eCLIP4.44□□□□□ -1.7
SMC4-225ENST00000497203 WEE2P0C1S8 567 aa4.44□□□□□ -1.7
SMC4-225ENST00000497203 ACP5P13686 325 aa4.44□□□□□ -1.7
SMC4-225ENST00000497203 SFPQP23246 707 aaKnown RBP eCLIP4.44□□□□□ -1.7
SMC4-225ENST00000497203 GPD2P43304 727 aa4.44□□□□□ -1.7
SMC4-225ENST00000497203 VPS41P49754 854 aa4.44□□□□□ -1.7
SMC4-225ENST00000497203 TUBP50607 506 aa4.44□□□□□ -1.7
SMC4-225ENST00000497203 OAZ1P54368 228 aa4.44□□□□□ -1.7
SMC4-225ENST00000497203 ALKBH1Q13686 389 aaKnown RBP4.44□□□□□ -1.7
SMC4-225ENST00000497203 BAK1Q16611 211 aa4.44□□□□□ -1.7
SMC4-225ENST00000497203 PFKFB3Q16875 520 aaPredicted RBP4.44□□□□□ -1.7
SMC4-225ENST00000497203 LRRC24Q50LG9 513 aa4.44□□□□□ -1.7
SMC4-225ENST00000497203 DSTYKQ6XUX3 929 aa4.44□□□□□ -1.7
SMC4-225ENST00000497203 C16orf71Q8IYS4 520 aaPredicted RBP4.44□□□□□ -1.7
SMC4-225ENST00000497203 ST8SIA4Q92187 359 aa4.44□□□□□ -1.7
SMC4-225ENST00000497203 HDAC2Q92769 488 aaKnown RBP4.44□□□□□ -1.7
SMC4-225ENST00000497203 STAMQ92783 540 aa4.44□□□□□ -1.7
SMC4-225ENST00000497203 MASTLQ96GX5 879 aa4.44□□□□□ -1.7
SMC4-225ENST00000497203 CLPBQ9H078 707 aa4.44□□□□□ -1.7
SMC4-225ENST00000497203 PREBQ9HCU5 417 aa4.44□□□□□ -1.7
SMC4-225ENST00000497203 IRAK4Q9NWZ3 460 aa4.44□□□□□ -1.7
SMC4-225ENST00000497203 FLRT1Q9NZU1 646 aa4.44□□□□□ -1.7
SMC4-225ENST00000497203 CNOT7Q9UIV1 285 aaKnown RBP4.44□□□□□ -1.7
SMC4-225ENST00000497203 ARHGAP26Q9UNA1 814 aa4.44□□□□□ -1.7
SMC4-225ENST00000497203 HEMK1Q9Y5R4 338 aaPredicted RBP4.44□□□□□ -1.7
SMC4-225ENST00000497203 SPATA31A5Q5VU36 1347 aa4.44□□□□□ -1.7
SMC4-225ENST00000497203 SPATA31A7Q8IWB4 1347 aa4.44□□□□□ -1.7
SMC4-225ENST00000497203 POC1B-GALNT4F8VUJ3 575 aa4.43□□□□□ -1.7
SMC4-225ENST00000497203 PRYO14603 147 aa4.43□□□□□ -1.7
SMC4-225ENST00000497203 METTL18O95568 372 aa4.43□□□□□ -1.7
SMC4-225ENST00000497203 ENO1P06733 434 aaKnown RBP4.43□□□□□ -1.7
SMC4-225ENST00000497203 CHRM5P08912 532 aaPredicted RBP4.43□□□□□ -1.7
SMC4-225ENST00000497203 CYP2D6P10635 497 aa4.43□□□□□ -1.7
SMC4-225ENST00000497203 PEPDP12955 493 aa4.43□□□□□ -1.7
SMC4-225ENST00000497203 MPGP29372 298 aa4.43□□□□□ -1.7
SMC4-225ENST00000497203 STAT6P42226 847 aa4.43□□□□□ -1.7
SMC4-225ENST00000497203 ABCG1P45844 678 aa4.43□□□□□ -1.7
SMC4-225ENST00000497203 RPS6KA3P51812 740 aa4.43□□□□□ -1.7
SMC4-225ENST00000497203 SLC37A1P57057 533 aa4.43□□□□□ -1.7
SMC4-225ENST00000497203 GAB1Q13480 694 aa4.43□□□□□ -1.7
SMC4-225ENST00000497203 SIM2Q14190 667 aaPredicted RBP4.43□□□□□ -1.7
SMC4-225ENST00000497203 GPR68Q15743 365 aa4.43□□□□□ -1.7
SMC4-225ENST00000497203 CERKLQ49MI3 558 aaPredicted RBP4.43□□□□□ -1.7
SMC4-225ENST00000497203 HYIQ5T013 277 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms