RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 REEP2Q9BRK0 252 aa5.31□□□□□ -1.56
VPS36-206ENST00000497149 ERVK-5Q9HDB9 667 aa5.31□□□□□ -1.56
VPS36-206ENST00000497149 TMEM160Q9NX00 188 aa5.31□□□□□ -1.56
VPS36-206ENST00000497149 WDR17Q8IZU2 1322 aa5.3□□□□□ -1.56
VPS36-206ENST00000497149 A0A1B0GVC2 190 aa5.3□□□□□ -1.56
VPS36-206ENST00000497149 WIPF3A6NGB9 483 aa5.3□□□□□ -1.56
VPS36-206ENST00000497149 NPIPB13A6NJU9 1138 aa5.3□□□□□ -1.56
VPS36-206ENST00000497149 NPIPB5A8MRT5 1133 aa5.3□□□□□ -1.56
VPS36-206ENST00000497149 NPIPB4C9JG80 1138 aa5.3□□□□□ -1.56
VPS36-206ENST00000497149 MCIDASD6RGH6 385 aa5.3□□□□□ -1.56
VPS36-206ENST00000497149 EYA2O00167 538 aa5.3□□□□□ -1.56
VPS36-206ENST00000497149 INPPL1O15357 1258 aa5.3□□□□□ -1.56
VPS36-206ENST00000497149 HOXC11O43248 304 aaPredicted RBP5.3□□□□□ -1.56
VPS36-206ENST00000497149 TSPAN3O60637 253 aa5.3□□□□□ -1.56
VPS36-206ENST00000497149 TUBB4AP04350 444 aa5.3□□□□□ -1.56
VPS36-206ENST00000497149 LYL1P12980 280 aa5.3□□□□□ -1.56
VPS36-206ENST00000497149 TNNT1P13805 278 aa5.3□□□□□ -1.56
VPS36-206ENST00000497149 ST6GAL1P15907 406 aa5.3□□□□□ -1.56
VPS36-206ENST00000497149 HOXB9P17482 250 aaPredicted RBP5.3□□□□□ -1.56
VPS36-206ENST00000497149 RPS6KB1P23443 525 aa5.3□□□□□ -1.56
VPS36-206ENST00000497149 HOXA7P31268 230 aaPredicted RBP5.3□□□□□ -1.56
VPS36-206ENST00000497149 POU5F1BQ06416 359 aa5.3□□□□□ -1.56
VPS36-206ENST00000497149 DLGAP5Q15398 846 aa5.3□□□□□ -1.56
VPS36-206ENST00000497149 MEX3CQ5U5Q3 659 aaKnown RBP5.3□□□□□ -1.56
VPS36-206ENST00000497149 MTFR2Q6P444 385 aa5.3□□□□□ -1.56
VPS36-206ENST00000497149 ZNF66Q6ZN08 573 aa5.3□□□□□ -1.56
VPS36-206ENST00000497149 MDGA2Q7Z553 956 aa5.3□□□□□ -1.56
VPS36-206ENST00000497149 TMEM200AQ86VY9 491 aa5.3□□□□□ -1.56
VPS36-206ENST00000497149 TMTC1Q8IUR5 882 aa5.3□□□□□ -1.56
VPS36-206ENST00000497149 ANKRD44Q8N8A2 993 aa5.3□□□□□ -1.56
VPS36-206ENST00000497149 OR52N4Q8NGI2 321 aa5.3□□□□□ -1.56
VPS36-206ENST00000497149 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.3□□□□□ -1.56
VPS36-206ENST00000497149 EIF2AK1Q9BQI3 630 aaKnown RBP5.3□□□□□ -1.56
VPS36-206ENST00000497149 HDHD5Q9BXW7 423 aa5.3□□□□□ -1.56
VPS36-206ENST00000497149 TRIM31Q9BZY9 425 aa5.3□□□□□ -1.56
VPS36-206ENST00000497149 SLITRK6Q9H5Y7 841 aa5.3□□□□□ -1.56
VPS36-206ENST00000497149 TXNRD2Q9NNW7 524 aa5.3□□□□□ -1.56
VPS36-206ENST00000497149 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.3□□□□□ -1.56
VPS36-206ENST00000497149 THAP1Q9NVV9 213 aa5.3□□□□□ -1.56
VPS36-206ENST00000497149 KLQ9UEF7 1012 aa5.3□□□□□ -1.56
VPS36-206ENST00000497149 CRYL1Q9Y2S2 319 aa5.3□□□□□ -1.56
VPS36-206ENST00000497149 KLK10O43240 276 aa5.29□□□□□ -1.56
VPS36-206ENST00000497149 USP12O75317 370 aa5.29□□□□□ -1.56
VPS36-206ENST00000497149 RBMXL2O75526 392 aaKnown RBP5.29□□□□□ -1.56
VPS36-206ENST00000497149 PKMP14618 531 aaKnown RBP5.29□□□□□ -1.56
VPS36-206ENST00000497149 AVPR2P30518 371 aa5.29□□□□□ -1.56
VPS36-206ENST00000497149 INHBEP58166 350 aa5.29□□□□□ -1.56
VPS36-206ENST00000497149 FOXF2Q12947 444 aa5.29□□□□□ -1.56
VPS36-206ENST00000497149 ZNF268Q14587 947 aaPredicted RBP5.29□□□□□ -1.56
VPS36-206ENST00000497149 EARS2Q5JPH6 523 aaKnown RBP5.29□□□□□ -1.56
VPS36-206ENST00000497149 CEP78Q5JTW2 689 aa5.29□□□□□ -1.56
VPS36-206ENST00000497149 CCDC70Q6NSX1 233 aa5.29□□□□□ -1.56
VPS36-206ENST00000497149 DENND1BQ6P3S1 775 aa5.29□□□□□ -1.56
VPS36-206ENST00000497149 RTL10Q7L3V2 364 aa5.29□□□□□ -1.56
VPS36-206ENST00000497149 PAQR4Q8N4S7 273 aaPredicted RBP5.29□□□□□ -1.56
VPS36-206ENST00000497149 ZFPM2Q8WW38 1151 aa5.29□□□□□ -1.56
VPS36-206ENST00000497149 STAMQ92783 540 aa5.29□□□□□ -1.56
VPS36-206ENST00000497149 KAT2BQ92831 832 aa5.29□□□□□ -1.56
VPS36-206ENST00000497149 MASTLQ96GX5 879 aa5.29□□□□□ -1.56
VPS36-206ENST00000497149 ADAD1Q96M93 576 aaKnown RBP5.29□□□□□ -1.56
VPS36-206ENST00000497149 WASH6PQ9NQA3 447 aa5.29□□□□□ -1.56
VPS36-206ENST00000497149 TLR8Q9NR97 1041 aaKnown RBP5.29□□□□□ -1.56
VPS36-206ENST00000497149 IFT80Q9P2H3 777 aaPredicted RBP5.29□□□□□ -1.56
VPS36-206ENST00000497149 C11orf21Q9P2W6 132 aa5.29□□□□□ -1.56
VPS36-206ENST00000497149 SLC13A4Q9UKG4 626 aa5.29□□□□□ -1.56
VPS36-206ENST00000497149 DTX4Q9Y2E6 619 aa5.29□□□□□ -1.56
VPS36-206ENST00000497149 PKP3Q9Y446 797 aa5.29□□□□□ -1.56
VPS36-206ENST00000497149 SLC22A23A1A5C7 686 aa5.28□□□□□ -1.56
VPS36-206ENST00000497149 PPP6CO00743 305 aa5.28□□□□□ -1.56
VPS36-206ENST00000497149 DHX16O60231 1041 aaKnown RBP5.28□□□□□ -1.56
VPS36-206ENST00000497149 CD63P08962 238 aa5.28□□□□□ -1.56
VPS36-206ENST00000497149 ARSAP15289 507 aa5.28□□□□□ -1.56
VPS36-206ENST00000497149 CERS1P27544 350 aa5.28□□□□□ -1.56
VPS36-206ENST00000497149 RPS6KA3P51812 740 aa5.28□□□□□ -1.56
VPS36-206ENST00000497149 MVDP53602 400 aa5.28□□□□□ -1.56
VPS36-206ENST00000497149 VAMP2P63027 116 aa5.28□□□□□ -1.56
VPS36-206ENST00000497149 HSF1Q00613 529 aa5.28□□□□□ -1.56
VPS36-206ENST00000497149 TRPC3Q13507 836 aa5.28□□□□□ -1.56
VPS36-206ENST00000497149 SMN1Q16637 294 aaKnown RBP5.28□□□□□ -1.56
VPS36-206ENST00000497149 RUNDC3AQ59EK9 446 aa5.28□□□□□ -1.56
VPS36-206ENST00000497149 WDR45BQ5MNZ6 344 aa5.28□□□□□ -1.56
VPS36-206ENST00000497149 LIPMQ5VYY2 423 aa5.28□□□□□ -1.56
VPS36-206ENST00000497149 ATG16L1Q676U5 607 aa5.28□□□□□ -1.56
VPS36-206ENST00000497149 ANO7Q6IWH7 933 aa5.28□□□□□ -1.56
VPS36-206ENST00000497149 MIS18BP1Q6P0N0 1132 aa5.28□□□□□ -1.56
VPS36-206ENST00000497149 SCN4BQ8IWT1 228 aa5.28□□□□□ -1.56
VPS36-206ENST00000497149 VPS52Q8N1B4 723 aa5.28□□□□□ -1.56
VPS36-206ENST00000497149 GALNT16Q8N428 558 aa5.28□□□□□ -1.56
VPS36-206ENST00000497149 ESX1Q8N693 406 aa5.28□□□□□ -1.56
VPS36-206ENST00000497149 ARL14EPQ8N8R7 260 aaPredicted RBP5.28□□□□□ -1.56
VPS36-206ENST00000497149 FAM47BQ8NA70 645 aa5.28□□□□□ -1.56
VPS36-206ENST00000497149 FAM110DQ8TAY7 271 aaPredicted RBP5.28□□□□□ -1.56
VPS36-206ENST00000497149 BCAS4Q8TDM0 211 aa5.28□□□□□ -1.56
VPS36-206ENST00000497149 PDGFCQ9NRA1 345 aa5.28□□□□□ -1.56
VPS36-206ENST00000497149 FLRT1Q9NZU1 646 aa5.28□□□□□ -1.56
VPS36-206ENST00000497149 CD207Q9UJ71 328 aa5.28□□□□□ -1.56
VPS36-206ENST00000497149 SLC25A13Q9UJS0 675 aa5.28□□□□□ -1.56
VPS36-206ENST00000497149 AFG3L2Q9Y4W6 797 aa5.28□□□□□ -1.56
VPS36-206ENST00000497149 ANP32CO43423 234 aa5.27□□□□□ -1.57
VPS36-206ENST00000497149 METTL18O95568 372 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms