RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 USP39Q53GS9 565 aaKnown RBP16.63■□□□□ 0.25
DNMT3A-215ENST00000496570 ALFQ53S48 1182 aa16.63■□□□□ 0.25
DNMT3A-215ENST00000496570 RABGAP1LQ5R372 815 aa16.63■□□□□ 0.25
DNMT3A-215ENST00000496570 SND1Q7KZF4 910 aaKnown RBP eCLIP16.63■□□□□ 0.25
DNMT3A-215ENST00000496570 STRADAQ7RTN6 431 aa16.63■□□□□ 0.25
DNMT3A-215ENST00000496570 ZNF366Q8N895 744 aa16.63■□□□□ 0.25
DNMT3A-215ENST00000496570 RNF214Q8ND24 703 aa16.63■□□□□ 0.25
DNMT3A-215ENST00000496570 VCPIP1Q96JH7 1222 aa16.63■□□□□ 0.25
DNMT3A-215ENST00000496570 SELENOOQ9BVL4 669 aa16.63■□□□□ 0.25
DNMT3A-215ENST00000496570 MAGEB5Q9BZ81 275 aa16.63■□□□□ 0.25
DNMT3A-215ENST00000496570 TMEM51Q9NW97 253 aa16.63■□□□□ 0.25
DNMT3A-215ENST00000496570 KIAA1522Q9P206 1035 aaPredicted RBP16.63■□□□□ 0.25
DNMT3A-215ENST00000496570 BCCIPQ9P287 314 aaKnown RBP eCLIP16.63■□□□□ 0.25
DNMT3A-215ENST00000496570 NCDNQ9UBB6 729 aa16.63■□□□□ 0.25
DNMT3A-215ENST00000496570 ZNF212Q9UDV6 495 aa16.63■□□□□ 0.25
DNMT3A-215ENST00000496570 OR51B4Q9Y5P0 310 aa16.63■□□□□ 0.25
DNMT3A-215ENST00000496570 ABCA7Q8IZY2 2146 aa16.63■□□□□ 0.25
DNMT3A-215ENST00000496570 TMCO5BA8MYB1 307 aa16.62■□□□□ 0.25
DNMT3A-215ENST00000496570 AP5Z1O43299 807 aa16.62■□□□□ 0.25
DNMT3A-215ENST00000496570 PLEKP08567 350 aaPredicted RBP16.62■□□□□ 0.25
DNMT3A-215ENST00000496570 GZMAP12544 262 aa16.62■□□□□ 0.25
DNMT3A-215ENST00000496570 POLR2EP19388 210 aaKnown RBP16.62■□□□□ 0.25
DNMT3A-215ENST00000496570 GPD1P21695 349 aa16.62■□□□□ 0.25
DNMT3A-215ENST00000496570 NUMBP49757 651 aa16.62■□□□□ 0.25
DNMT3A-215ENST00000496570 PLK1P53350 603 aa16.62■□□□□ 0.25
DNMT3A-215ENST00000496570 MAMLD1Q13495 774 aa16.62■□□□□ 0.25
DNMT3A-215ENST00000496570 CAMK2GQ13555 558 aaPredicted RBP16.62■□□□□ 0.25
DNMT3A-215ENST00000496570 PMS2CLQ68D20 193 aa16.62■□□□□ 0.25
DNMT3A-215ENST00000496570 PLEKHA7Q6IQ23 1121 aa16.62■□□□□ 0.25
DNMT3A-215ENST00000496570 DNAJC24Q6P3W2 148 aa16.62■□□□□ 0.25
DNMT3A-215ENST00000496570 SERPINA13PQ6UXR4 307 aa16.62■□□□□ 0.25
DNMT3A-215ENST00000496570 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.62■□□□□ 0.25
DNMT3A-215ENST00000496570 FAM172AQ8WUF8 416 aa16.62■□□□□ 0.25
DNMT3A-215ENST00000496570 CPLX3Q8WVH0 158 aa16.62■□□□□ 0.25
DNMT3A-215ENST00000496570 MCEEQ96PE7 176 aa16.62■□□□□ 0.25
DNMT3A-215ENST00000496570 HAPLN3Q96S86 360 aa16.62■□□□□ 0.25
DNMT3A-215ENST00000496570 MTG2Q9H4K7 406 aa16.62■□□□□ 0.25
DNMT3A-215ENST00000496570 RAB23Q9ULC3 237 aa16.62■□□□□ 0.25
DNMT3A-215ENST00000496570 NEU3Q9UQ49 428 aa16.62■□□□□ 0.25
DNMT3A-215ENST00000496570 TBC1D30Q9Y2I9 924 aa16.62■□□□□ 0.25
DNMT3A-215ENST00000496570 DOCK4Q8N1I0 1966 aa16.62■□□□□ 0.25
DNMT3A-215ENST00000496570 TNRC6BQ9UPQ9 1833 aaKnown RBP16.61■□□□□ 0.25
DNMT3A-215ENST00000496570 E9PAM4 449 aa16.61■□□□□ 0.25
DNMT3A-215ENST00000496570 CCP110O43303 1012 aa16.61■□□□□ 0.25
DNMT3A-215ENST00000496570 ATMINO43313 823 aaPredicted RBP16.61■□□□□ 0.25
DNMT3A-215ENST00000496570 EPN2O95208 641 aa16.61■□□□□ 0.25
DNMT3A-215ENST00000496570 ATP5BP06576 529 aaKnown RBP16.61■□□□□ 0.25
DNMT3A-215ENST00000496570 EPHX1P07099 455 aa16.61■□□□□ 0.25
DNMT3A-215ENST00000496570 CASP14P31944 242 aa16.61■□□□□ 0.25
DNMT3A-215ENST00000496570 ADRA1BP35368 520 aa16.61■□□□□ 0.25
DNMT3A-215ENST00000496570 ZNF143P52747 638 aaPredicted RBP16.61■□□□□ 0.25
DNMT3A-215ENST00000496570 CDH4P55283 916 aa16.61■□□□□ 0.25
DNMT3A-215ENST00000496570 FNDC3BQ53EP0 1204 aaKnown RBP16.61■□□□□ 0.25
DNMT3A-215ENST00000496570 MANEALQ5VSG8 457 aa16.61■□□□□ 0.25
DNMT3A-215ENST00000496570 PGBD3Q8N328 593 aa16.61■□□□□ 0.25
DNMT3A-215ENST00000496570 CCDC185Q8N715 623 aa16.61■□□□□ 0.25
DNMT3A-215ENST00000496570 IQCDQ96DY2 449 aa16.61■□□□□ 0.25
DNMT3A-215ENST00000496570 LOXL4Q96JB6 756 aa16.61■□□□□ 0.25
DNMT3A-215ENST00000496570 ISCUQ9H1K1 167 aa16.61■□□□□ 0.25
DNMT3A-215ENST00000496570 MPP6Q9NZW5 540 aa16.61■□□□□ 0.25
DNMT3A-215ENST00000496570 GMEB2Q9UKD1 530 aa16.61■□□□□ 0.25
DNMT3A-215ENST00000496570 PLA2G4CQ9UP65 541 aa16.61■□□□□ 0.25
DNMT3A-215ENST00000496570 ERVW-1Q9UQF0 538 aa16.61■□□□□ 0.25
DNMT3A-215ENST00000496570 PAXBP1Q9Y5B6 917 aa16.61■□□□□ 0.25
DNMT3A-215ENST00000496570 SDK1Q7Z5N4 2213 aa16.6■□□□□ 0.25
DNMT3A-215ENST00000496570 IGHV1OR15-9A0A0B4J2B8 117 aa16.6■□□□□ 0.25
DNMT3A-215ENST00000496570 FAM72CH0Y354 149 aa16.6■□□□□ 0.25
DNMT3A-215ENST00000496570 CLDN11O75508 207 aa16.6■□□□□ 0.25
DNMT3A-215ENST00000496570 FTLP02792 175 aaPredicted RBP16.6■□□□□ 0.25
DNMT3A-215ENST00000496570 ASLP04424 464 aa16.6■□□□□ 0.25
DNMT3A-215ENST00000496570 HNRNPH3P31942 346 aaKnown RBP16.6■□□□□ 0.25
DNMT3A-215ENST00000496570 NRG1Q02297 640 aaPredicted RBP16.6■□□□□ 0.25
DNMT3A-215ENST00000496570 ZNF252P-AS1Q0IIN9 211 aa16.6■□□□□ 0.25
DNMT3A-215ENST00000496570 SPEM2Q0P670 501 aa16.6■□□□□ 0.25
DNMT3A-215ENST00000496570 SLC12A1Q13621 1099 aa16.6■□□□□ 0.25
DNMT3A-215ENST00000496570 STARD3Q14849 445 aa16.6■□□□□ 0.25
DNMT3A-215ENST00000496570 ARID5BQ14865 1188 aa16.6■□□□□ 0.25
DNMT3A-215ENST00000496570 E2F5Q15329 346 aa16.6■□□□□ 0.25
DNMT3A-215ENST00000496570 FAM72AQ5TYM5 149 aa16.6■□□□□ 0.25
DNMT3A-215ENST00000496570 FAM72DQ6L9T8 149 aa16.6■□□□□ 0.25
DNMT3A-215ENST00000496570 METTL3Q86U44 580 aaKnown RBP16.6■□□□□ 0.25
DNMT3A-215ENST00000496570 FAM72BQ86X60 149 aa16.6■□□□□ 0.25
DNMT3A-215ENST00000496570 KIAA2013Q8IYS2 634 aa16.6■□□□□ 0.25
DNMT3A-215ENST00000496570 ARFGAP1Q8N6T3 406 aa16.6■□□□□ 0.25
DNMT3A-215ENST00000496570 HINFPQ9BQA5 517 aa16.6■□□□□ 0.25
DNMT3A-215ENST00000496570 FEM1AQ9BSK4 669 aa16.6■□□□□ 0.25
DNMT3A-215ENST00000496570 TRIM7Q9C029 511 aa16.6■□□□□ 0.25
DNMT3A-215ENST00000496570 PRSS16Q9NQE7 514 aa16.6■□□□□ 0.25
DNMT3A-215ENST00000496570 USP36Q9P275 1121 aaKnown RBP16.6■□□□□ 0.25
DNMT3A-215ENST00000496570 ARHGAP20Q9P2F6 1191 aa16.6■□□□□ 0.25
DNMT3A-215ENST00000496570 SLCO3A1Q9UIG8 710 aa16.6■□□□□ 0.25
DNMT3A-215ENST00000496570 NENFQ9UMX5 172 aa16.6■□□□□ 0.25
DNMT3A-215ENST00000496570 DCHS1Q96JQ0 3298 aa16.6■□□□□ 0.25
DNMT3A-215ENST00000496570 LAMA1P25391 3075 aa16.59■□□□□ 0.25
DNMT3A-215ENST00000496570 THADAQ6YHU6 1953 aa16.59■□□□□ 0.25
DNMT3A-215ENST00000496570 SYNCRIPO60506 623 aaKnown RBP16.59■□□□□ 0.25
DNMT3A-215ENST00000496570 RTN2O75298 545 aa16.59■□□□□ 0.25
DNMT3A-215ENST00000496570 SERPING1P05155 500 aa16.59■□□□□ 0.25
DNMT3A-215ENST00000496570 STK19P49842 368 aaPredicted RBP16.59■□□□□ 0.25
DNMT3A-215ENST00000496570 ECT2LQ008S8 904 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms