RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	UMODL1-AS1	Q8N2C9	162 aa		13.93	□□□□□ -0.18
APTX-231	ENST00000494973	CAPZA3	Q96KX2	299 aa		13.93	□□□□□ -0.18
APTX-231	ENST00000494973	PRICKLE1	Q96MT3	831 aa	Predicted RBP	13.93	□□□□□ -0.18
APTX-231	ENST00000494973	XPO6	Q96QU8	1125 aa	Known RBP	13.93	□□□□□ -0.18
APTX-231	ENST00000494973	HAUS2	Q9NVX0	235 aa		13.93	□□□□□ -0.18
APTX-231	ENST00000494973	NEU3	Q9UQ49	428 aa		13.93	□□□□□ -0.18
APTX-231	ENST00000494973	WNT6	Q9Y6F9	365 aa		13.93	□□□□□ -0.18
APTX-231	ENST00000494973	DOCK4	Q8N1I0	1966 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	GOLGA6L7	A0A1B0GV03	622 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	ILVBL	A1L0T0	632 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	CFAP69	A5D8W1	941 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	ARHGAP42	A6NI28	874 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	HACD1	B0YJ81	288 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	13.92	□□□□□ -0.18
APTX-231	ENST00000494973		H0Y626	953 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	KRIT1	O00522	736 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	MTSS1	O43312	755 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	RAMP2	O60895	175 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	TBL1X	O60907	577 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	PENK	P01210	267 aa	Predicted RBP	13.92	□□□□□ -0.18
APTX-231	ENST00000494973	RHOC	P08134	193 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	ADH5	P11766	374 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	KRT10	P13645	584 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	AMPD1	P23109	780 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	TUBB4B	P68371	445 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	MMRN1	Q13201	1228 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	E2F5	Q15329	346 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	EML3	Q32P44	896 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	RNF43	Q68DV7	783 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	TIGD7	Q6NT04	549 aa	Predicted RBP	13.92	□□□□□ -0.18
APTX-231	ENST00000494973	DRICH1	Q6PGQ1	229 aa	Predicted RBP	13.92	□□□□□ -0.18
APTX-231	ENST00000494973	C1orf228	Q6PIY5	440 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	PARM1	Q6UWI2	310 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	ZNF572	Q7Z3I7	529 aa	Predicted RBP	13.92	□□□□□ -0.18
APTX-231	ENST00000494973	C14orf80	Q86SX3	495 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	MFN1	Q8IWA4	741 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	PQLC3	Q8N755	202 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	PLD5	Q8N7P1	536 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	DNASE1L2	Q92874	299 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	IGSF8	Q969P0	613 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	WBP2	Q969T9	261 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	MSANTD3	Q96H12	275 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	FAM83C	Q9BQN1	747 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	BBS2	Q9BXC9	721 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	HEMGN	Q9BXL5	484 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	MAGEH1	Q9H213	219 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	TRPV5	Q9NQA5	729 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	FEZ2	Q9UHY8	353 aa	Predicted RBP	13.92	□□□□□ -0.18
APTX-231	ENST00000494973	TBC1D30	Q9Y2I9	924 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	SNX10	Q9Y5X0	201 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	NUMBL	Q9Y6R0	609 aa		13.92	□□□□□ -0.18
APTX-231	ENST00000494973	CXorf51A	A0A1B0GTR3	108 aa		13.91	□□□□□ -0.18
APTX-231	ENST00000494973	CTAGE15	A4D2H0	777 aa		13.91	□□□□□ -0.18
APTX-231	ENST00000494973	C2CD4D	B7Z1M9	353 aa		13.91	□□□□□ -0.18
APTX-231	ENST00000494973	ZNF185	O15231	689 aa		13.91	□□□□□ -0.18
APTX-231	ENST00000494973	CTAGE8	P0CG41	777 aa		13.91	□□□□□ -0.18
APTX-231	ENST00000494973	CHRNA3	P32297	505 aa		13.91	□□□□□ -0.18
APTX-231	ENST00000494973	EIF2D	P41214	584 aa	Known RBP	13.91	□□□□□ -0.18
APTX-231	ENST00000494973	FNTA	P49354	379 aa		13.91	□□□□□ -0.18
APTX-231	ENST00000494973	RPS24	P62847	133 aa	Known RBP	13.91	□□□□□ -0.18
APTX-231	ENST00000494973	DYNLT1	P63172	113 aa		13.91	□□□□□ -0.18
APTX-231	ENST00000494973	PFKP	Q01813	784 aa		13.91	□□□□□ -0.18
APTX-231	ENST00000494973	DMC1	Q14565	340 aa		13.91	□□□□□ -0.18
APTX-231	ENST00000494973	NOMO1	Q15155	1222 aa		13.91	□□□□□ -0.18
APTX-231	ENST00000494973	DHCR24	Q15392	516 aa		13.91	□□□□□ -0.18
APTX-231	ENST00000494973	CCNG2	Q16589	344 aa		13.91	□□□□□ -0.18
APTX-231	ENST00000494973	ANO4	Q32M45	955 aa		13.91	□□□□□ -0.18
APTX-231	ENST00000494973	POTEH	Q6S545	545 aa		13.91	□□□□□ -0.18
APTX-231	ENST00000494973	NUDT18	Q6ZVK8	323 aa		13.91	□□□□□ -0.18
APTX-231	ENST00000494973	CTAGE6	Q86UF2	777 aa		13.91	□□□□□ -0.18
APTX-231	ENST00000494973	CDKL3	Q8IVW4	592 aa	Predicted RBP	13.91	□□□□□ -0.18
APTX-231	ENST00000494973	CTAGE4	Q8IX94	777 aa		13.91	□□□□□ -0.18
APTX-231	ENST00000494973	ADGRG2	Q8IZP9	1017 aa		13.91	□□□□□ -0.18
APTX-231	ENST00000494973	C12orf50	Q8NA57	414 aa	Predicted RBP	13.91	□□□□□ -0.18
APTX-231	ENST00000494973	RIN3	Q8TB24	985 aa		13.91	□□□□□ -0.18
APTX-231	ENST00000494973	CSGALNACT1	Q8TDX6	532 aa		13.91	□□□□□ -0.18
APTX-231	ENST00000494973	GRK7	Q8WTQ7	553 aa		13.91	□□□□□ -0.18
APTX-231	ENST00000494973	FGF14	Q92915	247 aa		13.91	□□□□□ -0.18
APTX-231	ENST00000494973	RSPRY1	Q96DX4	576 aa		13.91	□□□□□ -0.18
APTX-231	ENST00000494973	KXD1	Q9BQD3	176 aa		13.91	□□□□□ -0.18
APTX-231	ENST00000494973	BRD9	Q9H8M2	597 aa		13.91	□□□□□ -0.18
APTX-231	ENST00000494973	L2HGDH	Q9H9P8	463 aa		13.91	□□□□□ -0.18
APTX-231	ENST00000494973	MPP6	Q9NZW5	540 aa		13.91	□□□□□ -0.18
APTX-231	ENST00000494973	KIAA1522	Q9P206	1035 aa	Predicted RBP	13.91	□□□□□ -0.18
APTX-231	ENST00000494973	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	13.9	□□□□□ -0.18
APTX-231	ENST00000494973	NEDD8-MDP1	E9PL57	170 aa		13.9	□□□□□ -0.18
APTX-231	ENST00000494973	MFSD11	O43934	449 aa		13.9	□□□□□ -0.18
APTX-231	ENST00000494973	CACNG3	O60359	315 aa		13.9	□□□□□ -0.18
APTX-231	ENST00000494973	TSPAN3	O60637	253 aa		13.9	□□□□□ -0.18
APTX-231	ENST00000494973	PHF2	O75151	1096 aa		13.9	□□□□□ -0.18
APTX-231	ENST00000494973	STK10	O94804	968 aa	Known RBP	13.9	□□□□□ -0.18
APTX-231	ENST00000494973	CYP17A1	P05093	508 aa		13.9	□□□□□ -0.18
APTX-231	ENST00000494973	TYR	P14679	529 aa		13.9	□□□□□ -0.18
APTX-231	ENST00000494973	HOXD9	P28356	352 aa	Predicted RBP	13.9	□□□□□ -0.18
APTX-231	ENST00000494973	GDI1	P31150	447 aa		13.9	□□□□□ -0.18
APTX-231	ENST00000494973	VCP	P55072	806 aa	Known RBP	13.9	□□□□□ -0.18
APTX-231	ENST00000494973	GEMIN4	P57678	1058 aa	Known RBP	13.9	□□□□□ -0.18
APTX-231	ENST00000494973	GALNT2	Q10471	571 aa		13.9	□□□□□ -0.18
APTX-231	ENST00000494973	RUNX3	Q13761	415 aa		13.9	□□□□□ -0.18
APTX-231	ENST00000494973	CYP1B1	Q16678	543 aa		13.9	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms