RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 ADRB1P08588 477 aa10.96□□□□□ -0.65
NELFE-213ENST00000494956 ACADMP11310 421 aa10.96□□□□□ -0.65
NELFE-213ENST00000494956 ATP1A3P13637 1013 aa10.96□□□□□ -0.65
NELFE-213ENST00000494956 ABCB4P21439 1286 aa10.96□□□□□ -0.65
NELFE-213ENST00000494956 CCR1P32246 355 aa10.96□□□□□ -0.65
NELFE-213ENST00000494956 NOS2P35228 1153 aa10.96□□□□□ -0.65
NELFE-213ENST00000494956 MATKP42679 507 aa10.96□□□□□ -0.65
NELFE-213ENST00000494956 GABRB2P47870 512 aa10.96□□□□□ -0.65
NELFE-213ENST00000494956 JAM2P57087 298 aa10.96□□□□□ -0.65
NELFE-213ENST00000494956 BPIFB4P59827 614 aa10.96□□□□□ -0.65
NELFE-213ENST00000494956 RPS14P62263 151 aaKnown RBP10.96□□□□□ -0.65
NELFE-213ENST00000494956 NOMO3P69849 1222 aa10.96□□□□□ -0.65
NELFE-213ENST00000494956 FMO1Q01740 532 aa10.96□□□□□ -0.65
NELFE-213ENST00000494956 AUHQ13825 339 aaKnown RBP10.96□□□□□ -0.65
NELFE-213ENST00000494956 SYCP1Q15431 976 aa10.96□□□□□ -0.65
NELFE-213ENST00000494956 STX1AQ16623 288 aa10.96□□□□□ -0.65
NELFE-213ENST00000494956 DUOXA1Q1HG43 343 aa10.96□□□□□ -0.65
NELFE-213ENST00000494956 CCDC183Q5T5S1 534 aa10.96□□□□□ -0.65
NELFE-213ENST00000494956 DCAF12L1Q5VU92 463 aa10.96□□□□□ -0.65
NELFE-213ENST00000494956 PEAR1Q5VY43 1037 aaPredicted RBP10.96□□□□□ -0.65
NELFE-213ENST00000494956 CXorf57Q6NSI4 855 aaKnown RBP10.96□□□□□ -0.65
NELFE-213ENST00000494956 PSAPL1Q6NUJ1 521 aa10.96□□□□□ -0.65
NELFE-213ENST00000494956 SLC23A3Q6PIS1 610 aa10.96□□□□□ -0.65
NELFE-213ENST00000494956 APTXQ7Z2E3 356 aaKnown RBP10.96□□□□□ -0.65
NELFE-213ENST00000494956 METTL3Q86U44 580 aaKnown RBP10.96□□□□□ -0.65
NELFE-213ENST00000494956 ERICH1Q86X53 443 aa10.96□□□□□ -0.65
NELFE-213ENST00000494956 AOPEPQ8N6M6 819 aa10.96□□□□□ -0.65
NELFE-213ENST00000494956 EMC1Q8N766 993 aa10.96□□□□□ -0.65
NELFE-213ENST00000494956 ZNF397Q8NF99 534 aaPredicted RBP10.96□□□□□ -0.65
NELFE-213ENST00000494956 SLC30A5Q8TAD4 765 aa10.96□□□□□ -0.65
NELFE-213ENST00000494956 C18orf8Q96DM3 657 aa10.96□□□□□ -0.65
NELFE-213ENST00000494956 CFAP57Q96MR6 1250 aa10.96□□□□□ -0.65
NELFE-213ENST00000494956 RPRD1AQ96P16 312 aaPredicted RBP10.96□□□□□ -0.65
NELFE-213ENST00000494956 PCDHB18PQ96TA0 734 aa10.96□□□□□ -0.65
NELFE-213ENST00000494956 TRIM62Q9BVG3 475 aa10.96□□□□□ -0.65
NELFE-213ENST00000494956 MIR1-1HGQ9H1L0 117 aa10.96□□□□□ -0.65
NELFE-213ENST00000494956 C6orf106Q9H6K1 298 aaPredicted RBP10.96□□□□□ -0.65
NELFE-213ENST00000494956 CAPN10Q9HC96 672 aa10.96□□□□□ -0.65
NELFE-213ENST00000494956 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.96□□□□□ -0.65
NELFE-213ENST00000494956 SERGEFQ9UGK8 458 aa10.96□□□□□ -0.65
NELFE-213ENST00000494956 CEP83Q9Y592 693 aa10.96□□□□□ -0.65
NELFE-213ENST00000494956 NCOR2Q9Y618 2525 aa10.96□□□□□ -0.66
NELFE-213ENST00000494956 PLXNA2O75051 1894 aa10.95□□□□□ -0.66
NELFE-213ENST00000494956 CNOT1A5YKK6 2376 aaKnown RBP10.95□□□□□ -0.66
NELFE-213ENST00000494956 MEI4A8MW99 385 aa10.95□□□□□ -0.66
NELFE-213ENST00000494956 PLK4O00444 970 aa10.95□□□□□ -0.66
NELFE-213ENST00000494956 ZNF18P17022 549 aa10.95□□□□□ -0.66
NELFE-213ENST00000494956 SOX5P35711 763 aa10.95□□□□□ -0.66
NELFE-213ENST00000494956 NOVA1P51513 510 aaKnown RBP10.95□□□□□ -0.66
NELFE-213ENST00000494956 METAP1P53582 386 aa10.95□□□□□ -0.66
NELFE-213ENST00000494956 MYL5Q02045 173 aa10.95□□□□□ -0.66
NELFE-213ENST00000494956 UBXN1Q04323 297 aa10.95□□□□□ -0.66
NELFE-213ENST00000494956 DEUP1Q05D60 604 aa10.95□□□□□ -0.66
NELFE-213ENST00000494956 TYRO3Q06418 890 aa10.95□□□□□ -0.66
NELFE-213ENST00000494956 ALFQ53S48 1182 aa10.95□□□□□ -0.66
NELFE-213ENST00000494956 SPDYCQ5MJ68 293 aa10.95□□□□□ -0.66
NELFE-213ENST00000494956 FKBP15Q5T1M5 1219 aa10.95□□□□□ -0.66
NELFE-213ENST00000494956 SH3PXD2AQ5TCZ1 1133 aa10.95□□□□□ -0.66
NELFE-213ENST00000494956 LAYNQ6UX15 382 aa10.95□□□□□ -0.66
NELFE-213ENST00000494956 ZCCHC9Q8N567 271 aaKnown RBP10.95□□□□□ -0.66
NELFE-213ENST00000494956 DEFB124Q8NES8 71 aa10.95□□□□□ -0.66
NELFE-213ENST00000494956 SNX19Q92543 992 aa10.95□□□□□ -0.66
NELFE-213ENST00000494956 ALG14Q96F25 216 aa10.95□□□□□ -0.66
NELFE-213ENST00000494956 PCMTD1Q96MG8 357 aaPredicted RBP10.95□□□□□ -0.66
NELFE-213ENST00000494956 MAGEB5Q9BZ81 275 aa10.95□□□□□ -0.66
NELFE-213ENST00000494956 TKTL2Q9H0I9 626 aa10.95□□□□□ -0.66
NELFE-213ENST00000494956 METTL5Q9NRN9 209 aaKnown RBP10.95□□□□□ -0.66
NELFE-213ENST00000494956 KIAA1522Q9P206 1035 aaPredicted RBP10.95□□□□□ -0.66
NELFE-213ENST00000494956 LIMA1Q9UHB6 759 aaKnown RBP10.95□□□□□ -0.66
NELFE-213ENST00000494956 SLC12A6Q9UHW9 1150 aa10.95□□□□□ -0.66
NELFE-213ENST00000494956 EIF2B4Q9UI10 523 aaKnown RBP10.95□□□□□ -0.66
NELFE-213ENST00000494956 TMEM59LQ9UK28 342 aa10.95□□□□□ -0.66
NELFE-213ENST00000494956 SLC6A14Q9UN76 642 aa10.95□□□□□ -0.66
NELFE-213ENST00000494956 DOCK9Q9BZ29 2069 aa10.95□□□□□ -0.66
NELFE-213ENST00000494956 TP53BP1Q12888 1972 aaPredicted RBP10.95□□□□□ -0.66
NELFE-213ENST00000494956 DOCK4Q8N1I0 1966 aa10.95□□□□□ -0.66
NELFE-213ENST00000494956 LGALS16A8MUM7 142 aa10.94□□□□□ -0.66
NELFE-213ENST00000494956 METTL12A8MUP2 240 aa10.94□□□□□ -0.66
NELFE-213ENST00000494956 MID1O15344 667 aa10.94□□□□□ -0.66
NELFE-213ENST00000494956 TEX33O43247 280 aa10.94□□□□□ -0.66
NELFE-213ENST00000494956 TOP3BO95985 862 aaKnown RBP10.94□□□□□ -0.66
NELFE-213ENST00000494956 IGLV3-19P01714 112 aa10.94□□□□□ -0.66
NELFE-213ENST00000494956 SERPINF2P08697 491 aa10.94□□□□□ -0.66
NELFE-213ENST00000494956 SLC2A3P11169 496 aa10.94□□□□□ -0.66
NELFE-213ENST00000494956 CDK11BP21127 795 aaKnown RBP10.94□□□□□ -0.66
NELFE-213ENST00000494956 CXCR3P49682 368 aa10.94□□□□□ -0.66
NELFE-213ENST00000494956 ST8SIA6P61647 398 aa10.94□□□□□ -0.66
NELFE-213ENST00000494956 ATP11AP98196 1134 aa10.94□□□□□ -0.66
NELFE-213ENST00000494956 ECT2LQ008S8 904 aa10.94□□□□□ -0.66
NELFE-213ENST00000494956 CDR2Q01850 454 aa10.94□□□□□ -0.66
NELFE-213ENST00000494956 BNC1Q01954 994 aa10.94□□□□□ -0.66
NELFE-213ENST00000494956 GFPT1Q06210 699 aaPredicted RBP10.94□□□□□ -0.66
NELFE-213ENST00000494956 PDAP1Q13442 181 aaKnown RBP10.94□□□□□ -0.66
NELFE-213ENST00000494956 C15orf59Q2T9L4 293 aaPredicted RBP10.94□□□□□ -0.66
NELFE-213ENST00000494956 HNRNPA1L2Q32P51 320 aaKnown RBP10.94□□□□□ -0.66
NELFE-213ENST00000494956 ANO6Q4KMQ2 910 aa10.94□□□□□ -0.66
NELFE-213ENST00000494956 ARTNQ5T4W7 220 aa10.94□□□□□ -0.66
NELFE-213ENST00000494956 C9orf64Q5T6V5 341 aa10.94□□□□□ -0.66
NELFE-213ENST00000494956 DAB2IPQ5VWQ8 1189 aa10.94□□□□□ -0.66
NELFE-213ENST00000494956 ZNF776Q68DI1 518 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms