RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 PLEKHG6Q3KR16 790 aa18.19■□□□□ 0.5
HDAC4-211ENST00000494800 PLA2G2CQ5R387 149 aa18.19■□□□□ 0.5
HDAC4-211ENST00000494800 LYSMD4Q5XG99 296 aa18.19■□□□□ 0.5
HDAC4-211ENST00000494800 LRSAM1Q6UWE0 723 aa18.19■□□□□ 0.5
HDAC4-211ENST00000494800 TMEFF1Q8IYR6 380 aa18.19■□□□□ 0.5
HDAC4-211ENST00000494800 EMC1Q8N766 993 aa18.19■□□□□ 0.5
HDAC4-211ENST00000494800 C3orf20Q8ND61 904 aa18.19■□□□□ 0.5
HDAC4-211ENST00000494800 NETO1Q8TDF5 533 aa18.19■□□□□ 0.5
HDAC4-211ENST00000494800 BAP1Q92560 729 aa18.19■□□□□ 0.5
HDAC4-211ENST00000494800 LMLNQ96KR4 655 aa18.19■□□□□ 0.5
HDAC4-211ENST00000494800 MKRN2Q9H000 416 aaKnown RBP18.19■□□□□ 0.5
HDAC4-211ENST00000494800 SLC6A17Q9H1V8 727 aa18.19■□□□□ 0.5
HDAC4-211ENST00000494800 MBD1Q9UIS9 605 aaPredicted RBP18.19■□□□□ 0.5
HDAC4-211ENST00000494800 GPR179Q6PRD1 2367 aa18.19■□□□□ 0.5
HDAC4-211ENST00000494800 ZNF292O60281 2723 aa18.18■□□□□ 0.5
HDAC4-211ENST00000494800 RNASEH1O60930 286 aaKnown RBP18.18■□□□□ 0.5
HDAC4-211ENST00000494800 TFE3P19532 575 aaPredicted RBP18.18■□□□□ 0.5
HDAC4-211ENST00000494800 CD6P30203 668 aa18.18■□□□□ 0.5
HDAC4-211ENST00000494800 UBASH3AP57075 661 aa18.18■□□□□ 0.5
HDAC4-211ENST00000494800 PUM1Q14671 1186 aaKnown RBP eCLIP18.18■□□□□ 0.5
HDAC4-211ENST00000494800 CCDC6Q16204 474 aa18.18■□□□□ 0.5
HDAC4-211ENST00000494800 RSPO4Q2I0M5 234 aaPredicted RBP18.18■□□□□ 0.5
HDAC4-211ENST00000494800 DNAJC24Q6P3W2 148 aa18.18■□□□□ 0.5
HDAC4-211ENST00000494800 IRF2BP2Q7Z5L9 587 aa18.18■□□□□ 0.5
HDAC4-211ENST00000494800 PHLDB2Q86SQ0 1253 aa18.18■□□□□ 0.5
HDAC4-211ENST00000494800 CIR1Q86X95 450 aaPredicted RBP18.18■□□□□ 0.5
HDAC4-211ENST00000494800 FRMD1Q8N878 549 aa18.18■□□□□ 0.5
HDAC4-211ENST00000494800 RXFP2Q8WXD0 754 aa18.18■□□□□ 0.5
HDAC4-211ENST00000494800 PIGKQ92643 395 aa18.18■□□□□ 0.5
HDAC4-211ENST00000494800 IGSF8Q969P0 613 aa18.18■□□□□ 0.5
HDAC4-211ENST00000494800 IQCDQ96DY2 449 aa18.18■□□□□ 0.5
HDAC4-211ENST00000494800 HAPLN3Q96S86 360 aa18.18■□□□□ 0.5
HDAC4-211ENST00000494800 ITM2CQ9NQX7 267 aa18.18■□□□□ 0.5
HDAC4-211ENST00000494800 ERVW-1Q9UQF0 538 aa18.18■□□□□ 0.5
HDAC4-211ENST00000494800 EML5Q05BV3 1969 aa18.17■□□□□ 0.5
HDAC4-211ENST00000494800 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.17■□□□□ 0.5
HDAC4-211ENST00000494800 KHNYNO15037 678 aaKnown RBP18.17■□□□□ 0.5
HDAC4-211ENST00000494800 HOXD12P35452 270 aa18.17■□□□□ 0.5
HDAC4-211ENST00000494800 PTPN9P43378 593 aa18.17■□□□□ 0.5
HDAC4-211ENST00000494800 COPAP53621 1224 aa18.17■□□□□ 0.5
HDAC4-211ENST00000494800 ZBTB16Q05516 673 aa18.17■□□□□ 0.5
HDAC4-211ENST00000494800 SFSWAPQ12872 951 aaKnown RBP18.17■□□□□ 0.5
HDAC4-211ENST00000494800 CDO1Q16878 200 aa18.17■□□□□ 0.5
HDAC4-211ENST00000494800 C5orf22Q49AR2 442 aa18.17■□□□□ 0.5
HDAC4-211ENST00000494800 FIGNQ5HY92 759 aa18.17■□□□□ 0.5
HDAC4-211ENST00000494800 SYCP2LQ5T4T6 812 aa18.17■□□□□ 0.5
HDAC4-211ENST00000494800 ACAD10Q6JQN1 1059 aa18.17■□□□□ 0.5
HDAC4-211ENST00000494800 MON1BQ7L1V2 547 aa18.17■□□□□ 0.5
HDAC4-211ENST00000494800 ARMCX6Q7L4S7 300 aa18.17■□□□□ 0.5
HDAC4-211ENST00000494800 STRADAQ7RTN6 431 aa18.17■□□□□ 0.5
HDAC4-211ENST00000494800 RABEPKQ7Z6M1 372 aa18.17■□□□□ 0.5
HDAC4-211ENST00000494800 FAM131BQ86XD5 332 aa18.17■□□□□ 0.5
HDAC4-211ENST00000494800 FOXJ1Q92949 421 aa18.17■□□□□ 0.5
HDAC4-211ENST00000494800 RMDN1Q96DB5 314 aa18.17■□□□□ 0.5
HDAC4-211ENST00000494800 ADAM33Q9BZ11 813 aa18.17■□□□□ 0.5
HDAC4-211ENST00000494800 AIPL1Q9NZN9 384 aa18.17■□□□□ 0.5
HDAC4-211ENST00000494800 USP36Q9P275 1121 aaKnown RBP18.17■□□□□ 0.5
HDAC4-211ENST00000494800 INTS6Q9UL03 887 aaKnown RBP18.17■□□□□ 0.5
HDAC4-211ENST00000494800 WDR87Q6ZQQ6 2873 aa18.17■□□□□ 0.5
HDAC4-211ENST00000494800 C2CD4BA6NLJ0 364 aa18.16■□□□□ 0.5
HDAC4-211ENST00000494800 SIGLEC16A6NMB1 481 aa18.16■□□□□ 0.5
HDAC4-211ENST00000494800 ENDOD1O94919 500 aa18.16■□□□□ 0.5
HDAC4-211ENST00000494800 DNTTP04053 509 aa18.16■□□□□ 0.5
HDAC4-211ENST00000494800 GPD1P21695 349 aa18.16■□□□□ 0.5
HDAC4-211ENST00000494800 GGCXP38435 758 aa18.16■□□□□ 0.5
HDAC4-211ENST00000494800 PTGER3P43115 390 aa18.16■□□□□ 0.5
HDAC4-211ENST00000494800 TPMTP51580 245 aa18.16■□□□□ 0.5
HDAC4-211ENST00000494800 PLK1P53350 603 aa18.16■□□□□ 0.5
HDAC4-211ENST00000494800 KLHL30Q0D2K2 578 aa18.16■□□□□ 0.5
HDAC4-211ENST00000494800 PTP4A2Q12974 167 aa18.16■□□□□ 0.5
HDAC4-211ENST00000494800 ARID5BQ14865 1188 aa18.16■□□□□ 0.5
HDAC4-211ENST00000494800 SF3A2Q15428 464 aaKnown RBP18.16■□□□□ 0.5
HDAC4-211ENST00000494800 HNRNPA1L2Q32P51 320 aaKnown RBP18.16■□□□□ 0.5
HDAC4-211ENST00000494800 CCDC14Q49A88 953 aa18.16■□□□□ 0.5
HDAC4-211ENST00000494800 TTC31Q49AM3 519 aaPredicted RBP18.16■□□□□ 0.5
HDAC4-211ENST00000494800 ZNF776Q68DI1 518 aaPredicted RBP18.16■□□□□ 0.5
HDAC4-211ENST00000494800 TRNP1Q6NT89 227 aa18.16■□□□□ 0.5
HDAC4-211ENST00000494800 BNIPLQ7Z465 357 aa18.16■□□□□ 0.5
HDAC4-211ENST00000494800 CACUL1Q86Y37 369 aa18.16■□□□□ 0.5
HDAC4-211ENST00000494800 SYT12Q8IV01 421 aa18.16■□□□□ 0.5
HDAC4-211ENST00000494800 APCDD1Q8J025 514 aa18.16■□□□□ 0.5
HDAC4-211ENST00000494800 ZNF366Q8N895 744 aa18.16■□□□□ 0.5
HDAC4-211ENST00000494800 VCPIP1Q96JH7 1222 aa18.16■□□□□ 0.5
HDAC4-211ENST00000494800 MUC3BQ9H195 1237 aa18.16■□□□□ 0.5
HDAC4-211ENST00000494800 PRSS16Q9NQE7 514 aa18.16■□□□□ 0.5
HDAC4-211ENST00000494800 SLC25A13Q9UJS0 675 aa18.16■□□□□ 0.5
HDAC4-211ENST00000494800 VPS28Q9UK41 221 aa18.16■□□□□ 0.5
HDAC4-211ENST00000494800 EDDM13A0A1B0GTR0 161 aa18.15■□□□□ 0.5
HDAC4-211ENST00000494800 TARSL2A2RTX5 802 aaKnown RBP18.15■□□□□ 0.5
HDAC4-211ENST00000494800 E9PAM4 449 aa18.15■□□□□ 0.5
HDAC4-211ENST00000494800 SRGAP2O75044 1071 aa18.15■□□□□ 0.5
HDAC4-211ENST00000494800 RHOCP08134 193 aa18.15■□□□□ 0.5
HDAC4-211ENST00000494800 RFC1P35251 1148 aaPredicted RBP18.15■□□□□ 0.5
HDAC4-211ENST00000494800 ATXN1P54253 815 aaKnown RBP18.15■□□□□ 0.5
HDAC4-211ENST00000494800 KRT83P78385 493 aa18.15■□□□□ 0.5
HDAC4-211ENST00000494800 ZNF33AQ06730 810 aa18.15■□□□□ 0.5
HDAC4-211ENST00000494800 C15orf59Q2T9L4 293 aaPredicted RBP18.15■□□□□ 0.5
HDAC4-211ENST00000494800 WDR45BQ5MNZ6 344 aa18.15■□□□□ 0.5
HDAC4-211ENST00000494800 C6orf118Q5T5N4 469 aa18.15■□□□□ 0.5
HDAC4-211ENST00000494800 CXorf57Q6NSI4 855 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms