RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 VSIG1Q86XK7 387 aa10.66□□□□□ -0.7
SAMM50-206ENST00000494795 EFCAB3Q8N7B9 438 aa10.66□□□□□ -0.7
SAMM50-206ENST00000494795 FRMPD3Q5JV73 1810 aa10.66□□□□□ -0.7
SAMM50-206ENST00000494795 ZNF487B1APH4 448 aa10.66□□□□□ -0.7
SAMM50-206ENST00000494795 SCAMP3O14828 347 aaKnown RBP10.66□□□□□ -0.7
SAMM50-206ENST00000494795 ZFXP17010 805 aaPredicted RBP10.66□□□□□ -0.7
SAMM50-206ENST00000494795 GLUD2P49448 558 aa10.66□□□□□ -0.7
SAMM50-206ENST00000494795 RAB27AP51159 221 aa10.66□□□□□ -0.7
SAMM50-206ENST00000494795 KCNJ2P63252 427 aa10.66□□□□□ -0.7
SAMM50-206ENST00000494795 IHHQ14623 411 aa10.66□□□□□ -0.7
SAMM50-206ENST00000494795 PDK4Q16654 411 aa10.66□□□□□ -0.7
SAMM50-206ENST00000494795 RTP2Q5QGT7 225 aa10.66□□□□□ -0.7
SAMM50-206ENST00000494795 VARS2Q5ST30 1063 aaKnown RBP10.66□□□□□ -0.7
SAMM50-206ENST00000494795 FAM219BQ5XKK7 198 aa10.66□□□□□ -0.7
SAMM50-206ENST00000494795 SMYD5Q6GMV2 418 aa10.66□□□□□ -0.7
SAMM50-206ENST00000494795 PRSS55Q6UWB4 352 aaPredicted RBP10.66□□□□□ -0.7
SAMM50-206ENST00000494795 SLC26A11Q86WA9 606 aa10.66□□□□□ -0.7
SAMM50-206ENST00000494795 MCUQ8NE86 351 aa10.66□□□□□ -0.7
SAMM50-206ENST00000494795 ARMC2Q8NEN0 867 aa10.66□□□□□ -0.7
SAMM50-206ENST00000494795 DPF3Q92784 378 aa10.66□□□□□ -0.7
SAMM50-206ENST00000494795 FCRL2Q96LA5 508 aaPredicted RBP10.66□□□□□ -0.7
SAMM50-206ENST00000494795 SRPK1Q96SB4 655 aaKnown RBP10.66□□□□□ -0.7
SAMM50-206ENST00000494795 BRD8Q9H0E9 1235 aa10.66□□□□□ -0.7
SAMM50-206ENST00000494795 CHRAC1Q9NRG0 131 aa10.66□□□□□ -0.7
SAMM50-206ENST00000494795 GMIPQ9P107 970 aa10.66□□□□□ -0.7
SAMM50-206ENST00000494795 ACTL7AQ9Y615 435 aa10.66□□□□□ -0.7
SAMM50-206ENST00000494795 PQBP1O60828 265 aaKnown RBP10.65□□□□□ -0.7
SAMM50-206ENST00000494795 CNTN5O94779 1100 aa10.65□□□□□ -0.7
SAMM50-206ENST00000494795 UPP2O95045 317 aa10.65□□□□□ -0.7
SAMM50-206ENST00000494795 IGLV3-25P01717 112 aa10.65□□□□□ -0.7
SAMM50-206ENST00000494795 CHRM1P11229 460 aaPredicted RBP10.65□□□□□ -0.7
SAMM50-206ENST00000494795 GARSP41250 739 aaKnown RBP10.65□□□□□ -0.7
SAMM50-206ENST00000494795 NEK3P51956 506 aa10.65□□□□□ -0.7
SAMM50-206ENST00000494795 SCAPQ12770 1279 aa10.65□□□□□ -0.7
SAMM50-206ENST00000494795 DLG2Q15700 870 aa10.65□□□□□ -0.7
SAMM50-206ENST00000494795 YTHDF3Q7Z739 585 aaKnown RBP10.65□□□□□ -0.7
SAMM50-206ENST00000494795 CMC1Q7Z7K0 106 aa10.65□□□□□ -0.7
SAMM50-206ENST00000494795 MIB1Q86YT6 1006 aa10.65□□□□□ -0.7
SAMM50-206ENST00000494795 ARHGAP12Q8IWW6 846 aa10.65□□□□□ -0.7
SAMM50-206ENST00000494795 STAMBPL1Q96FJ0 436 aa10.65□□□□□ -0.7
SAMM50-206ENST00000494795 SGSM3Q96HU1 749 aa10.65□□□□□ -0.7
SAMM50-206ENST00000494795 UNC93B1Q9H1C4 597 aa10.65□□□□□ -0.7
SAMM50-206ENST00000494795 MOCS1Q9NZB8 636 aa10.65□□□□□ -0.7
SAMM50-206ENST00000494795 PCDHA11Q9Y5I1 949 aa10.65□□□□□ -0.7
SAMM50-206ENST00000494795 FAM159BA6NKW6 160 aa10.65□□□□□ -0.7
SAMM50-206ENST00000494795 A8MUI8 341 aa10.65□□□□□ -0.7
SAMM50-206ENST00000494795 ENPP3O14638 875 aa10.65□□□□□ -0.7
SAMM50-206ENST00000494795 IRAK2O43187 625 aa10.65□□□□□ -0.7
SAMM50-206ENST00000494795 ALDH1A1P00352 501 aa10.65□□□□□ -0.7
SAMM50-206ENST00000494795 ALDOAP04075 364 aaKnown RBP10.65□□□□□ -0.7
SAMM50-206ENST00000494795 TPSB2P20231 275 aa10.65□□□□□ -0.7
SAMM50-206ENST00000494795 VEGFBP49765 207 aa10.65□□□□□ -0.7
SAMM50-206ENST00000494795 NR1H3Q13133 447 aa10.65□□□□□ -0.7
SAMM50-206ENST00000494795 CRYMQ14894 314 aa10.65□□□□□ -0.7
SAMM50-206ENST00000494795 PDK1Q15118 436 aa10.65□□□□□ -0.7
SAMM50-206ENST00000494795 TPSAB1Q15661 275 aa10.65□□□□□ -0.7
SAMM50-206ENST00000494795 PIK3R6Q5UE93 754 aa10.65□□□□□ -0.7
SAMM50-206ENST00000494795 GSDMBQ8TAX9 411 aa10.65□□□□□ -0.7
SAMM50-206ENST00000494795 NTAN1Q96AB6 310 aa10.65□□□□□ -0.7
SAMM50-206ENST00000494795 PPP1R12CQ9BZL4 782 aa10.65□□□□□ -0.7
SAMM50-206ENST00000494795 SLC39A8Q9C0K1 460 aa10.65□□□□□ -0.7
SAMM50-206ENST00000494795 CAB39LQ9H9S4 337 aa10.65□□□□□ -0.7
SAMM50-206ENST00000494795 MARCH5Q9NX47 278 aa10.65□□□□□ -0.7
SAMM50-206ENST00000494795 CHKBQ9Y259 395 aa10.65□□□□□ -0.7
SAMM50-206ENST00000494795 IKBKGQ9Y6K9 419 aa10.65□□□□□ -0.7
SAMM50-206ENST00000494795 EDF1O60869 148 aaKnown RBP10.65□□□□□ -0.71
SAMM50-206ENST00000494795 TADA2AO75478 443 aa10.65□□□□□ -0.71
SAMM50-206ENST00000494795 FSBPO95073 299 aa10.65□□□□□ -0.71
SAMM50-206ENST00000494795 TSPY1Q01534 308 aa10.65□□□□□ -0.71
SAMM50-206ENST00000494795 RASIP1Q5U651 963 aa10.65□□□□□ -0.71
SAMM50-206ENST00000494795 BTBD8Q5XKL5 378 aa10.65□□□□□ -0.71
SAMM50-206ENST00000494795 RNF19BQ6ZMZ0 732 aa10.65□□□□□ -0.71
SAMM50-206ENST00000494795 LRRC8DQ7L1W4 858 aa10.65□□□□□ -0.71
SAMM50-206ENST00000494795 DEFB128Q7Z7B8 93 aa10.65□□□□□ -0.71
SAMM50-206ENST00000494795 GIPC2Q8TF65 315 aa10.65□□□□□ -0.71
SAMM50-206ENST00000494795 CCDC97Q96F63 343 aaPredicted RBP10.65□□□□□ -0.71
SAMM50-206ENST00000494795 PGAP3Q96FM1 320 aaPredicted RBP10.65□□□□□ -0.71
SAMM50-206ENST00000494795 TMEM237Q96Q45 408 aa10.65□□□□□ -0.71
SAMM50-206ENST00000494795 UNKQ9C0B0 810 aaKnown RBP10.65□□□□□ -0.71
SAMM50-206ENST00000494795 VANGL2Q9ULK5 521 aa10.65□□□□□ -0.71
SAMM50-206ENST00000494795 HS3ST4Q9Y661 456 aa10.65□□□□□ -0.71
SAMM50-206ENST00000494795 CASP8AP2Q9UKL3 1982 aa10.64□□□□□ -0.71
SAMM50-206ENST00000494795 CHRNA4P43681 627 aa10.64□□□□□ -0.71
SAMM50-206ENST00000494795 SLC11A1P49279 550 aa10.64□□□□□ -0.71
SAMM50-206ENST00000494795 PPIDQ08752 370 aaKnown RBP10.64□□□□□ -0.71
SAMM50-206ENST00000494795 HSF5Q4G112 596 aaPredicted RBP10.64□□□□□ -0.71
SAMM50-206ENST00000494795 ALFQ53S48 1182 aa10.64□□□□□ -0.71
SAMM50-206ENST00000494795 CEP128Q6ZU80 1094 aa10.64□□□□□ -0.71
SAMM50-206ENST00000494795 TBC1D1Q86TI0 1168 aaPredicted RBP10.64□□□□□ -0.71
SAMM50-206ENST00000494795 LRRC8CQ8TDW0 803 aa10.64□□□□□ -0.71
SAMM50-206ENST00000494795 CASD1Q96PB1 797 aa10.64□□□□□ -0.71
SAMM50-206ENST00000494795 MYLK2Q9H1R3 596 aa10.64□□□□□ -0.71
SAMM50-206ENST00000494795 PNPLA8Q9NP80 782 aa10.64□□□□□ -0.71
SAMM50-206ENST00000494795 RCOR3Q9P2K3 495 aaPredicted RBP10.64□□□□□ -0.71
SAMM50-206ENST00000494795 MARCOQ9UEW3 520 aaPredicted RBP10.64□□□□□ -0.71
SAMM50-206ENST00000494795 SMG5Q9UPR3 1016 aaKnown RBP10.64□□□□□ -0.71
SAMM50-206ENST00000494795 RPS6KL1Q9Y6S9 549 aa10.64□□□□□ -0.71
SAMM50-206ENST00000494795 NYNRINQ9P2P1 1898 aaKnown RBP10.64□□□□□ -0.71
SAMM50-206ENST00000494795 MYO16Q9Y6X6 1858 aa10.64□□□□□ -0.71
SAMM50-206ENST00000494795 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms