RNA–Protein interactions for RNA: ENST00000494743.1

BRD3-206, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-206ENST00000494743 LGI2Q8N0V4 545 aa12.45□□□□□ -0.42
BRD3-206ENST00000494743 P3H4Q92791 437 aa12.45□□□□□ -0.42
BRD3-206ENST00000494743 SMARCD2Q92925 531 aa12.45□□□□□ -0.42
BRD3-206ENST00000494743 P2RY11Q96G91 374 aa12.45□□□□□ -0.42
BRD3-206ENST00000494743 RPRD1AQ96P16 312 aaPredicted RBP12.45□□□□□ -0.42
BRD3-206ENST00000494743 LRRC3BQ96PB8 259 aa12.45□□□□□ -0.42
BRD3-206ENST00000494743 FAM118BQ9BPY3 351 aa12.45□□□□□ -0.42
BRD3-206ENST00000494743 DDX50Q9BQ39 737 aaKnown RBP12.45□□□□□ -0.42
BRD3-206ENST00000494743 DDX47Q9H0S4 455 aaKnown RBP12.45□□□□□ -0.42
BRD3-206ENST00000494743 POMKQ9H5K3 350 aa12.45□□□□□ -0.42
BRD3-206ENST00000494743 RETREG1Q9H6L5 497 aa12.45□□□□□ -0.42
BRD3-206ENST00000494743 CATSPERBQ9H7T0 1116 aa12.45□□□□□ -0.42
BRD3-206ENST00000494743 HOMER3Q9NSC5 361 aa12.45□□□□□ -0.42
BRD3-206ENST00000494743 NDFIP2Q9NV92 336 aa12.45□□□□□ -0.42
BRD3-206ENST00000494743 TMEM248Q9NWD8 314 aa12.45□□□□□ -0.42
BRD3-206ENST00000494743 MPP6Q9NZW5 540 aa12.45□□□□□ -0.42
BRD3-206ENST00000494743 STIM2Q9P246 746 aa12.45□□□□□ -0.42
BRD3-206ENST00000494743 ZDBF2Q9HCK1 2354 aa12.44□□□□□ -0.42
BRD3-206ENST00000494743 C2orf16Q68DN1 1984 aa12.44□□□□□ -0.42
BRD3-206ENST00000494743 EFCAB8A8MWE9 144 aa12.44□□□□□ -0.42
BRD3-206ENST00000494743 CHRNA3P32297 505 aa12.44□□□□□ -0.42
BRD3-206ENST00000494743 COILP38432 576 aaPredicted RBP12.44□□□□□ -0.42
BRD3-206ENST00000494743 VCPP55072 806 aaKnown RBP12.44□□□□□ -0.42
BRD3-206ENST00000494743 RABGAP1LQ5R372 815 aa12.44□□□□□ -0.42
BRD3-206ENST00000494743 TTC39BQ5VTQ0 682 aaPredicted RBP12.44□□□□□ -0.42
BRD3-206ENST00000494743 EP400NLQ6ZTU2 488 aa12.44□□□□□ -0.42
BRD3-206ENST00000494743 CHST9Q7L1S5 443 aa12.44□□□□□ -0.42
BRD3-206ENST00000494743 CIR1Q86X95 450 aaPredicted RBP12.44□□□□□ -0.42
BRD3-206ENST00000494743 ARHGAP12Q8IWW6 846 aa12.44□□□□□ -0.42
BRD3-206ENST00000494743 KLHL7Q8IXQ5 586 aa12.44□□□□□ -0.42
BRD3-206ENST00000494743 CELF5Q8N6W0 485 aaKnown RBP12.44□□□□□ -0.42
BRD3-206ENST00000494743 SLCO2A1Q92959 643 aa12.44□□□□□ -0.42
BRD3-206ENST00000494743 MAGOHBQ96A72 148 aaKnown RBP12.44□□□□□ -0.42
BRD3-206ENST00000494743 NECTIN4Q96NY8 510 aa12.44□□□□□ -0.42
BRD3-206ENST00000494743 MYADMQ96S97 322 aa12.44□□□□□ -0.42
BRD3-206ENST00000494743 KRT12Q99456 494 aa12.44□□□□□ -0.42
BRD3-206ENST00000494743 NOL6Q9H6R4 1146 aaKnown RBP12.44□□□□□ -0.42
BRD3-206ENST00000494743 OBP2AQ9NY56 170 aa12.44□□□□□ -0.42
BRD3-206ENST00000494743 PCYOX1Q9UHG3 505 aa12.44□□□□□ -0.42
BRD3-206ENST00000494743 CD207Q9UJ71 328 aa12.44□□□□□ -0.42
BRD3-206ENST00000494743 DNPEPQ9ULA0 475 aa12.44□□□□□ -0.42
BRD3-206ENST00000494743 HEY1Q9Y5J3 304 aa12.44□□□□□ -0.42
BRD3-206ENST00000494743 RAD54BQ9Y620 910 aa12.44□□□□□ -0.42
BRD3-206ENST00000494743 DENND4CQ5VZ89 1909 aa12.44□□□□□ -0.42
BRD3-206ENST00000494743 TRDMT1O14717 391 aaKnown RBP12.43□□□□□ -0.42
BRD3-206ENST00000494743 MCF2LO15068 1137 aa12.43□□□□□ -0.42
BRD3-206ENST00000494743 MAP3K6O95382 1288 aa12.43□□□□□ -0.42
BRD3-206ENST00000494743 SERPINB6P35237 376 aa12.43□□□□□ -0.42
BRD3-206ENST00000494743 VIPR2P41587 438 aa12.43□□□□□ -0.42
BRD3-206ENST00000494743 KCNJ1P48048 391 aa12.43□□□□□ -0.42
BRD3-206ENST00000494743 MAPKAPK2P49137 400 aa12.43□□□□□ -0.42
BRD3-206ENST00000494743 CDH4P55283 916 aa12.43□□□□□ -0.42
BRD3-206ENST00000494743 RPS24P62847 133 aaKnown RBP12.43□□□□□ -0.42
BRD3-206ENST00000494743 XRCC4Q13426 336 aa12.43□□□□□ -0.42
BRD3-206ENST00000494743 BYSLQ13895 437 aaKnown RBP12.43□□□□□ -0.42
BRD3-206ENST00000494743 CCDC137Q6PK04 289 aaKnown RBP12.43□□□□□ -0.42
BRD3-206ENST00000494743 TFAP2DQ7Z6R9 452 aa12.43□□□□□ -0.42
BRD3-206ENST00000494743 TP53INP2Q8IXH6 220 aa12.43□□□□□ -0.42
BRD3-206ENST00000494743 CFAP52Q8N1V2 620 aa12.43□□□□□ -0.42
BRD3-206ENST00000494743 UMODL1-AS1Q8N2C9 162 aa12.43□□□□□ -0.42
BRD3-206ENST00000494743 LZTR1Q8N653 840 aa12.43□□□□□ -0.42
BRD3-206ENST00000494743 USP15Q9Y4E8 981 aaPredicted RBP12.43□□□□□ -0.42
BRD3-206ENST00000494743 ZFP37Q9Y6Q3 630 aaPredicted RBP12.43□□□□□ -0.42
BRD3-206ENST00000494743 A0A1B0GVM2 712 aa12.42□□□□□ -0.42
BRD3-206ENST00000494743 GRXCR2A6NFK2 248 aa12.42□□□□□ -0.42
BRD3-206ENST00000494743 TCAF2A6NFQ2 919 aa12.42□□□□□ -0.42
BRD3-206ENST00000494743 H3BQ06 376 aaPredicted RBP12.42□□□□□ -0.42
BRD3-206ENST00000494743 TSPAN3O60637 253 aa12.42□□□□□ -0.42
BRD3-206ENST00000494743 CLDN11O75508 207 aa12.42□□□□□ -0.42
BRD3-206ENST00000494743 ITGAVP06756 1048 aa12.42□□□□□ -0.42
BRD3-206ENST00000494743 RBP3P10745 1247 aa12.42□□□□□ -0.42
BRD3-206ENST00000494743 CHKAP35790 457 aa12.42□□□□□ -0.42
BRD3-206ENST00000494743 PTGIRP43119 386 aa12.42□□□□□ -0.42
BRD3-206ENST00000494743 NDST2P52849 883 aa12.42□□□□□ -0.42
BRD3-206ENST00000494743 EIF3EP60228 445 aaKnown RBP12.42□□□□□ -0.42
BRD3-206ENST00000494743 GALNT2Q10471 571 aa12.42□□□□□ -0.42
BRD3-206ENST00000494743 SNX1Q13596 522 aa12.42□□□□□ -0.42
BRD3-206ENST00000494743 DHX34Q14147 1143 aaKnown RBP12.42□□□□□ -0.42
BRD3-206ENST00000494743 PRKD1Q15139 912 aaPredicted RBP12.42□□□□□ -0.42
BRD3-206ENST00000494743 MPP7Q5T2T1 576 aa12.42□□□□□ -0.42
BRD3-206ENST00000494743 FYB2Q5VWT5 728 aa12.42□□□□□ -0.42
BRD3-206ENST00000494743 BZW1Q7L1Q6 419 aaKnown RBP12.42□□□□□ -0.42
BRD3-206ENST00000494743 TDRD5Q8NAT2 981 aaKnown RBP12.42□□□□□ -0.42
BRD3-206ENST00000494743 NETO2Q8NC67 525 aa12.42□□□□□ -0.42
BRD3-206ENST00000494743 HJURPQ8NCD3 748 aaPredicted RBP12.42□□□□□ -0.42
BRD3-206ENST00000494743 TTC16Q8NEE8 873 aa12.42□□□□□ -0.42
BRD3-206ENST00000494743 MYRIPQ8NFW9 859 aa12.42□□□□□ -0.42
BRD3-206ENST00000494743 OTUB2Q96DC9 234 aa12.42□□□□□ -0.42
BRD3-206ENST00000494743 CELF6Q96J87 481 aaKnown RBP12.42□□□□□ -0.42
BRD3-206ENST00000494743 RUNDC3BQ96NL0 473 aa12.42□□□□□ -0.42
BRD3-206ENST00000494743 QKIQ96PU8 341 aaKnown RBP eCLIP12.42□□□□□ -0.42
BRD3-206ENST00000494743 KCNH6Q9H252 994 aa12.42□□□□□ -0.42
BRD3-206ENST00000494743 UBE2ZQ9H832 354 aaPredicted RBP12.42□□□□□ -0.42
BRD3-206ENST00000494743 CD320Q9NPF0 282 aa12.42□□□□□ -0.42
BRD3-206ENST00000494743 DONSONQ9NYP3 566 aa12.42□□□□□ -0.42
BRD3-206ENST00000494743 TBC1D14Q9P2M4 693 aa12.42□□□□□ -0.42
BRD3-206ENST00000494743 AMACRQ9UHK6 382 aa12.42□□□□□ -0.42
BRD3-206ENST00000494743 DRG1Q9Y295 367 aaKnown RBP12.42□□□□□ -0.42
BRD3-206ENST00000494743 NEU2Q9Y3R4 380 aa12.42□□□□□ -0.42
BRD3-206ENST00000494743 HELZP42694 1942 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms