RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 FHOD1Q9Y613 1164 aa9.92□□□□□ -0.82
MSH5-218ENST00000494646 SLCO1B1Q9Y6L6 691 aa9.92□□□□□ -0.82
MSH5-218ENST00000494646 MUC22E2RYF6 1773 aaPredicted RBP9.92□□□□□ -0.82
MSH5-218ENST00000494646 PLXNA2O75051 1894 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 CABIN1Q9Y6J0 2220 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 A0A1B0GTW7 788 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 FAM47DPA6NHR8 397 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 M0QYT0 321 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 KCNK3O14649 394 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 SH3BP5O60239 455 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 HSF2BPO75031 334 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 FSBPO95073 299 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 MOCS3O95396 460 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 IGLV3-19P01714 112 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 ASLP04424 464 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 GLI1P08151 1106 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 CD59P13987 128 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 PDGFRAP16234 1089 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 ABCB4P21439 1286 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 MZF1P28698 734 aaPredicted RBP9.91□□□□□ -0.82
MSH5-218ENST00000494646 CCR1P32246 355 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 NOS2P35228 1153 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 CSNK1EP49674 416 aaKnown RBP9.91□□□□□ -0.82
MSH5-218ENST00000494646 STK19P49842 368 aaPredicted RBP9.91□□□□□ -0.82
MSH5-218ENST00000494646 KLK7P49862 253 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 BPIFB4P59827 614 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 FAM193AP78312 1265 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 ECT2LQ008S8 904 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 GRIK2Q13002 908 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 PDAP1Q13442 181 aaKnown RBP9.91□□□□□ -0.82
MSH5-218ENST00000494646 RNF219Q5W0B1 726 aaPredicted RBP9.91□□□□□ -0.82
MSH5-218ENST00000494646 FBXL22Q6P050 247 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 OLFML1Q6UWY5 402 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 RABEPKQ7Z6M1 372 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 PHLDB2Q86SQ0 1253 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 CCAR2Q8N163 923 aaKnown RBP9.91□□□□□ -0.82
MSH5-218ENST00000494646 ZNF557Q8N988 423 aaPredicted RBP9.91□□□□□ -0.82
MSH5-218ENST00000494646 GPT2Q8TD30 523 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 PRMT1Q99873 361 aaKnown RBP9.91□□□□□ -0.82
MSH5-218ENST00000494646 BTBD1Q9H0C5 482 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 KDM4CQ9H3R0 1056 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 IL21RQ9HBE5 538 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 FBXL12Q9NXK8 326 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 SUSD2Q9UGT4 822 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 VANGL2Q9ULK5 521 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 NCKAP1Q9Y2A7 1128 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 NFE2L3Q9Y4A8 694 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 SNX10Q9Y5X0 201 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 HS3ST4Q9Y661 456 aa9.91□□□□□ -0.82
MSH5-218ENST00000494646 CEP295Q9C0D2 2601 aa9.9□□□□□ -0.82
MSH5-218ENST00000494646 TP53BP1Q12888 1972 aaPredicted RBP9.9□□□□□ -0.82
MSH5-218ENST00000494646 DOCK4Q8N1I0 1966 aa9.9□□□□□ -0.82
MSH5-218ENST00000494646 EPG5Q9HCE0 2579 aa9.9□□□□□ -0.82
MSH5-218ENST00000494646 LAMA5O15230 3695 aa9.9□□□□□ -0.82
MSH5-218ENST00000494646 NYNRINQ9P2P1 1898 aaKnown RBP9.9□□□□□ -0.82
MSH5-218ENST00000494646 A0A1B0GVT2 93 aa9.9□□□□□ -0.82
MSH5-218ENST00000494646 A0A1W2PP55 124 aa9.9□□□□□ -0.82
MSH5-218ENST00000494646 GOLGA8SH3BPF8 625 aa9.9□□□□□ -0.82
MSH5-218ENST00000494646 MID1O15344 667 aa9.9□□□□□ -0.82
MSH5-218ENST00000494646 BCAT2O15382 392 aaPredicted RBP9.9□□□□□ -0.82
MSH5-218ENST00000494646 RNASEH1O60930 286 aaKnown RBP9.9□□□□□ -0.82
MSH5-218ENST00000494646 KRT37O76014 449 aa9.9□□□□□ -0.82
MSH5-218ENST00000494646 SEMA4FO95754 770 aa9.9□□□□□ -0.82
MSH5-218ENST00000494646 SRPRAP08240 638 aaKnown RBP9.9□□□□□ -0.82
MSH5-218ENST00000494646 SLC2A3P11169 496 aa9.9□□□□□ -0.82
MSH5-218ENST00000494646 CYP11B1P15538 503 aa9.9□□□□□ -0.82
MSH5-218ENST00000494646 TFE3P19532 575 aaPredicted RBP9.9□□□□□ -0.82
MSH5-218ENST00000494646 SULT1E1P49888 294 aa9.9□□□□□ -0.82
MSH5-218ENST00000494646 IRAK1P51617 712 aa9.9□□□□□ -0.82
MSH5-218ENST00000494646 SNX16P57768 344 aa9.9□□□□□ -0.82
MSH5-218ENST00000494646 SIM1P81133 766 aaPredicted RBP9.9□□□□□ -0.82
MSH5-218ENST00000494646 CENPCQ03188 943 aa9.9□□□□□ -0.82
MSH5-218ENST00000494646 AUHQ13825 339 aaKnown RBP9.9□□□□□ -0.82
MSH5-218ENST00000494646 HNRNPA1L2Q32P51 320 aaKnown RBP9.9□□□□□ -0.82
MSH5-218ENST00000494646 RABGAP1LQ5R372 815 aa9.9□□□□□ -0.82
MSH5-218ENST00000494646 C9orf64Q5T6V5 341 aa9.9□□□□□ -0.82
MSH5-218ENST00000494646 ZNF776Q68DI1 518 aaPredicted RBP9.9□□□□□ -0.82
MSH5-218ENST00000494646 PIP4P1Q86T03 277 aa9.9□□□□□ -0.82
MSH5-218ENST00000494646 NOP9Q86U38 636 aaKnown RBP9.9□□□□□ -0.82
MSH5-218ENST00000494646 ERICH1Q86X53 443 aa9.9□□□□□ -0.82
MSH5-218ENST00000494646 MMAAQ8IVH4 418 aaKnown RBP9.9□□□□□ -0.82
MSH5-218ENST00000494646 STK40Q8N2I9 435 aa9.9□□□□□ -0.82
MSH5-218ENST00000494646 TMEM35BQ8NCS4 154 aa9.9□□□□□ -0.82
MSH5-218ENST00000494646 ENOX1Q8TC92 643 aaKnown RBP9.9□□□□□ -0.82
MSH5-218ENST00000494646 CPA5Q8WXQ8 436 aa9.9□□□□□ -0.82
MSH5-218ENST00000494646 PTPRN2Q92932 1015 aa9.9□□□□□ -0.82
MSH5-218ENST00000494646 C18orf8Q96DM3 657 aa9.9□□□□□ -0.82
MSH5-218ENST00000494646 RPRD1AQ96P16 312 aaPredicted RBP9.9□□□□□ -0.82
MSH5-218ENST00000494646 FAM129BQ96TA1 746 aa9.9□□□□□ -0.82
MSH5-218ENST00000494646 OMDQ99983 421 aa9.9□□□□□ -0.82
MSH5-218ENST00000494646 NAA15Q9BXJ9 866 aaKnown RBP9.9□□□□□ -0.82
MSH5-218ENST00000494646 STK33Q9BYT3 514 aa9.9□□□□□ -0.82
MSH5-218ENST00000494646 ADAM33Q9BZ11 813 aa9.9□□□□□ -0.82
MSH5-218ENST00000494646 RSPH9Q9H1X1 276 aaPredicted RBP9.9□□□□□ -0.82
MSH5-218ENST00000494646 NEUROG2Q9H2A3 272 aa9.9□□□□□ -0.82
MSH5-218ENST00000494646 WDCPQ9H6R7 721 aa9.9□□□□□ -0.82
MSH5-218ENST00000494646 TMPRSS4Q9NRS4 437 aa9.9□□□□□ -0.82
MSH5-218ENST00000494646 FANCLQ9NW38 375 aa9.9□□□□□ -0.82
MSH5-218ENST00000494646 ASNSD1Q9NWL6 643 aa9.9□□□□□ -0.82
MSH5-218ENST00000494646 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms