RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 TDRD6O60522 2096 aaKnown RBP9.98□□□□□ -0.81
UBR4-216ENST00000494503 MYLKQ15746 1914 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 LOC400499M0QZD8 3231 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 EDDM13A0A1B0GTR0 161 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 A0A1W2PPC4 97 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 ENC1O14682 589 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 PSMA7O14818 248 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 VILLO15195 856 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 PCDHGA12O60330 932 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 DFNA5O60443 496 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 FBXO21O94952 628 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 LUC7L3O95232 432 aaKnown RBP9.97□□□□□ -0.81
UBR4-216ENST00000494503 LDOC1O95751 146 aaPredicted RBP9.97□□□□□ -0.81
UBR4-216ENST00000494503 CAPNS1P04632 268 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 IGHV4-34P06331 123 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 PAEPP09466 180 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 CD38P28907 300 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 MAT2AP31153 395 aaKnown RBP9.97□□□□□ -0.81
UBR4-216ENST00000494503 ABCG1P45844 678 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 ARRB1P49407 418 aaPredicted RBP9.97□□□□□ -0.81
UBR4-216ENST00000494503 ECT2LQ008S8 904 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 LRRC63Q05C16 580 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 POM121L1PQ3SYA9 428 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 ACCSLQ4AC99 568 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 SOWAHCQ53LP3 525 aaPredicted RBP9.97□□□□□ -0.81
UBR4-216ENST00000494503 DCAF6Q58WW2 860 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 FSCBQ5H9T9 825 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 MPP7Q5T2T1 576 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 MSANTD2Q6P1R3 559 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 USP30Q70CQ3 517 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 SND1Q7KZF4 910 aaKnown RBP eCLIP9.97□□□□□ -0.81
UBR4-216ENST00000494503 CREBRFQ8IUR6 639 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 SCUBE3Q8IX30 993 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 STK40Q8N2I9 435 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 OR2T34Q8NGX1 318 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 FIBINQ8TAL6 211 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 DQX1Q8TE96 717 aaKnown RBP9.97□□□□□ -0.81
UBR4-216ENST00000494503 KAT5Q92993 513 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 SLC35C1Q96A29 364 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 NXPE2Q96DL1 559 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 CRELD1Q96HD1 420 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 ELF4Q99607 663 aaPredicted RBP9.97□□□□□ -0.81
UBR4-216ENST00000494503 FAM204AQ9H8W3 233 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 OSGEPQ9NPF4 335 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 HOOK1Q9UJC3 728 aaKnown RBP9.97□□□□□ -0.81
UBR4-216ENST00000494503 ERVW-1Q9UQF0 538 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 DOCK9Q9BZ29 2069 aa9.97□□□□□ -0.81
UBR4-216ENST00000494503 FAM237AA0A1B0GTK4 181 aa9.96□□□□□ -0.82
UBR4-216ENST00000494503 A0A1B0GTQ1 180 aa9.96□□□□□ -0.82
UBR4-216ENST00000494503 F5H5T6 163 aa9.96□□□□□ -0.82
UBR4-216ENST00000494503 RFPL3O75679 317 aa9.96□□□□□ -0.82
UBR4-216ENST00000494503 ADH1BP00325 375 aa9.96□□□□□ -0.82
UBR4-216ENST00000494503 IGLV3-27P01718 113 aa9.96□□□□□ -0.82
UBR4-216ENST00000494503 PDGFRAP16234 1089 aa9.96□□□□□ -0.82
UBR4-216ENST00000494503 ZNF18P17022 549 aa9.96□□□□□ -0.82
UBR4-216ENST00000494503 STK19P49842 368 aaPredicted RBP9.96□□□□□ -0.82
UBR4-216ENST00000494503 STILQ15468 1287 aa9.96□□□□□ -0.82
UBR4-216ENST00000494503 SMAD1Q15797 465 aaKnown RBP9.96□□□□□ -0.82
UBR4-216ENST00000494503 CNGA2Q16280 664 aa9.96□□□□□ -0.82
UBR4-216ENST00000494503 ZC3H12AQ5D1E8 599 aaKnown RBP9.96□□□□□ -0.82
UBR4-216ENST00000494503 MS4A13Q5J8X5 152 aa9.96□□□□□ -0.82
UBR4-216ENST00000494503 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.96□□□□□ -0.82
UBR4-216ENST00000494503 DBX2Q6ZNG2 339 aa9.96□□□□□ -0.82
UBR4-216ENST00000494503 LRRC69Q6ZNQ3 347 aa9.96□□□□□ -0.82
UBR4-216ENST00000494503 KIAA0907Q7Z7F0 614 aaPredicted RBP9.96□□□□□ -0.82
UBR4-216ENST00000494503 TAC4Q86UU9 113 aa9.96□□□□□ -0.82
UBR4-216ENST00000494503 CIR1Q86X95 450 aaPredicted RBP9.96□□□□□ -0.82
UBR4-216ENST00000494503 SLC35F5Q8WV83 523 aa9.96□□□□□ -0.82
UBR4-216ENST00000494503 TTC17Q96AE7 1141 aa9.96□□□□□ -0.82
UBR4-216ENST00000494503 MYEOVQ96EZ4 313 aa9.96□□□□□ -0.82
UBR4-216ENST00000494503 FCRL2Q96LA5 508 aaPredicted RBP9.96□□□□□ -0.82
UBR4-216ENST00000494503 HSFY1Q96LI6 401 aa9.96□□□□□ -0.82
UBR4-216ENST00000494503 METTL14Q9HCE5 456 aaKnown RBP9.96□□□□□ -0.82
UBR4-216ENST00000494503 XPO7Q9UIA9 1087 aaKnown RBP9.96□□□□□ -0.82
UBR4-216ENST00000494503 SLCO3A1Q9UIG8 710 aa9.96□□□□□ -0.82
UBR4-216ENST00000494503 TLR6Q9Y2C9 796 aa9.96□□□□□ -0.82
UBR4-216ENST00000494503 ZDHHC9Q9Y397 364 aa9.96□□□□□ -0.82
UBR4-216ENST00000494503 COQ4Q9Y3A0 265 aa9.96□□□□□ -0.82
UBR4-216ENST00000494503 TARSL2A2RTX5 802 aaKnown RBP9.95□□□□□ -0.82
UBR4-216ENST00000494503 RNF225M0QZC1 329 aaPredicted RBP9.95□□□□□ -0.82
UBR4-216ENST00000494503 SART1O43290 800 aaKnown RBP9.95□□□□□ -0.82
UBR4-216ENST00000494503 THAP12O43422 761 aa9.95□□□□□ -0.82
UBR4-216ENST00000494503 SDC3O75056 442 aa9.95□□□□□ -0.82
UBR4-216ENST00000494503 LETM1O95202 739 aaPredicted RBP9.95□□□□□ -0.82
UBR4-216ENST00000494503 WNT1P04628 370 aa9.95□□□□□ -0.82
UBR4-216ENST00000494503 SRPRAP08240 638 aaKnown RBP9.95□□□□□ -0.82
UBR4-216ENST00000494503 VAV1P15498 845 aa9.95□□□□□ -0.82
UBR4-216ENST00000494503 GOT1P17174 413 aa9.95□□□□□ -0.82
UBR4-216ENST00000494503 TACR2P21452 398 aa9.95□□□□□ -0.82
UBR4-216ENST00000494503 C5AR1P21730 350 aa9.95□□□□□ -0.82
UBR4-216ENST00000494503 USP8P40818 1118 aa9.95□□□□□ -0.82
UBR4-216ENST00000494503 ADPRHP54922 357 aa9.95□□□□□ -0.82
UBR4-216ENST00000494503 PKDCCQ504Y2 493 aa9.95□□□□□ -0.82
UBR4-216ENST00000494503 HS1BP3Q53T59 392 aa9.95□□□□□ -0.82
UBR4-216ENST00000494503 C9orf64Q5T6V5 341 aa9.95□□□□□ -0.82
UBR4-216ENST00000494503 HES3Q5TGS1 186 aa9.95□□□□□ -0.82
UBR4-216ENST00000494503 PRPF39Q86UA1 669 aaKnown RBP9.95□□□□□ -0.82
UBR4-216ENST00000494503 TMPRSS12Q86WS5 348 aa9.95□□□□□ -0.82
UBR4-216ENST00000494503 ARHGEF19Q8IW93 802 aa9.95□□□□□ -0.82
UBR4-216ENST00000494503 APCDD1Q8J025 514 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms