RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 PATE3B3GLJ2 98 aa15.16■□□□□ 0.02
ATG4B-224ENST00000494132 GOLGA6L19H0YKK7 550 aa15.16■□□□□ 0.02
ATG4B-224ENST00000494132 CNTN5O94779 1100 aa15.16■□□□□ 0.02
ATG4B-224ENST00000494132 ATP5BP06576 529 aaKnown RBP15.16■□□□□ 0.02
ATG4B-224ENST00000494132 RDXP35241 583 aaKnown RBP15.16■□□□□ 0.02
ATG4B-224ENST00000494132 ID4P47928 161 aa15.16■□□□□ 0.02
ATG4B-224ENST00000494132 STK19P49842 368 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-224ENST00000494132 ASIC2Q16515 512 aa15.16■□□□□ 0.02
ATG4B-224ENST00000494132 PLEKHG6Q3KR16 790 aa15.16■□□□□ 0.02
ATG4B-224ENST00000494132 ALFQ53S48 1182 aa15.16■□□□□ 0.02
ATG4B-224ENST00000494132 BRMS1LQ5PSV4 323 aa15.16■□□□□ 0.02
ATG4B-224ENST00000494132 CXorf57Q6NSI4 855 aaKnown RBP15.16■□□□□ 0.02
ATG4B-224ENST00000494132 MON1BQ7L1V2 547 aa15.16■□□□□ 0.02
ATG4B-224ENST00000494132 CYP2U1Q7Z449 544 aa15.16■□□□□ 0.02
ATG4B-224ENST00000494132 PHF13Q86YI8 300 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-224ENST00000494132 GPR161Q8N6U8 529 aaKnown RBP15.16■□□□□ 0.02
ATG4B-224ENST00000494132 ZNF557Q8N988 423 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-224ENST00000494132 PIGKQ92643 395 aa15.16■□□□□ 0.02
ATG4B-224ENST00000494132 TTC17Q96AE7 1141 aa15.16■□□□□ 0.02
ATG4B-224ENST00000494132 PGAP3Q96FM1 320 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-224ENST00000494132 SIPA1Q96FS4 1042 aa15.16■□□□□ 0.02
ATG4B-224ENST00000494132 RPL10LQ96L21 214 aaKnown RBP15.16■□□□□ 0.02
ATG4B-224ENST00000494132 MRGPRX3Q96LB0 322 aa15.16■□□□□ 0.02
ATG4B-224ENST00000494132 SELENOOQ9BVL4 669 aa15.16■□□□□ 0.02
ATG4B-224ENST00000494132 TTYH3Q9C0H2 523 aa15.16■□□□□ 0.02
ATG4B-224ENST00000494132 MPP6Q9NZW5 540 aa15.16■□□□□ 0.02
ATG4B-224ENST00000494132 KIAA1522Q9P206 1035 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-224ENST00000494132 DMXL1Q9Y485 3027 aa15.16■□□□□ 0.02
ATG4B-224ENST00000494132 CHD5Q8TDI0 1954 aa15.15■□□□□ 0.02
ATG4B-224ENST00000494132 BCLAF3A2AJT9 711 aaKnown RBP15.15■□□□□ 0.02
ATG4B-224ENST00000494132 C2CD4BA6NLJ0 364 aa15.15■□□□□ 0.02
ATG4B-224ENST00000494132 TTC34A8MYJ7 566 aa15.15■□□□□ 0.02
ATG4B-224ENST00000494132 ATMINO43313 823 aaPredicted RBP15.15■□□□□ 0.02
ATG4B-224ENST00000494132 MOCS3O95396 460 aa15.15■□□□□ 0.02
ATG4B-224ENST00000494132 CAVIN2O95810 425 aa15.15■□□□□ 0.02
ATG4B-224ENST00000494132 CALB1P05937 261 aa15.15■□□□□ 0.02
ATG4B-224ENST00000494132 SKILP12757 684 aa15.15■□□□□ 0.02
ATG4B-224ENST00000494132 TNFAIP3P21580 790 aa15.15■□□□□ 0.02
ATG4B-224ENST00000494132 SDC4P31431 198 aa15.15■□□□□ 0.02
ATG4B-224ENST00000494132 RFC1P35251 1148 aaPredicted RBP15.15■□□□□ 0.02
ATG4B-224ENST00000494132 UBASH3AP57075 661 aa15.15■□□□□ 0.02
ATG4B-224ENST00000494132 LMNB2Q03252 620 aa15.15■□□□□ 0.02
ATG4B-224ENST00000494132 BYSLQ13895 437 aaKnown RBP15.15■□□□□ 0.02
ATG4B-224ENST00000494132 SKOR2Q2VWA4 1001 aaPredicted RBP15.15■□□□□ 0.02
ATG4B-224ENST00000494132 CCDC14Q49A88 953 aa15.15■□□□□ 0.02
ATG4B-224ENST00000494132 AASDHQ4L235 1098 aaPredicted RBP15.15■□□□□ 0.02
ATG4B-224ENST00000494132 PLA2G2CQ5R387 149 aa15.15■□□□□ 0.02
ATG4B-224ENST00000494132 SFMBT2Q5VUG0 894 aa15.15■□□□□ 0.02
ATG4B-224ENST00000494132 LPCAT2Q7L5N7 544 aa15.15■□□□□ 0.02
ATG4B-224ENST00000494132 BNIPLQ7Z465 357 aa15.15■□□□□ 0.02
ATG4B-224ENST00000494132 FAM124AQ86V42 546 aa15.15■□□□□ 0.02
ATG4B-224ENST00000494132 C11orf74Q86VG3 221 aa15.15■□□□□ 0.02
ATG4B-224ENST00000494132 C12orf50Q8NA57 414 aaPredicted RBP15.15■□□□□ 0.02
ATG4B-224ENST00000494132 OR2T3Q8NH03 318 aa15.15■□□□□ 0.02
ATG4B-224ENST00000494132 SYT11Q9BT88 431 aa15.15■□□□□ 0.02
ATG4B-224ENST00000494132 MAGEB5Q9BZ81 275 aa15.15■□□□□ 0.02
ATG4B-224ENST00000494132 HAUS4Q9H6D7 363 aa15.15■□□□□ 0.02
ATG4B-224ENST00000494132 PRSS16Q9NQE7 514 aa15.15■□□□□ 0.02
ATG4B-224ENST00000494132 SLCO3A1Q9UIG8 710 aa15.15■□□□□ 0.02
ATG4B-224ENST00000494132 ERVW-1Q9UQF0 538 aa15.15■□□□□ 0.02
ATG4B-224ENST00000494132 DCHS1Q96JQ0 3298 aa15.15■□□□□ 0.02
ATG4B-224ENST00000494132 SRGAP2O75044 1071 aa15.14■□□□□ 0.01
ATG4B-224ENST00000494132 LRP3O75074 770 aa15.14■□□□□ 0.01
ATG4B-224ENST00000494132 SIN3BO75182 1162 aa15.14■□□□□ 0.01
ATG4B-224ENST00000494132 ZNF217O75362 1048 aa15.14■□□□□ 0.01
ATG4B-224ENST00000494132 F9P00740 461 aa15.14■□□□□ 0.01
ATG4B-224ENST00000494132 CCDC172P0C7W6 258 aa15.14■□□□□ 0.01
ATG4B-224ENST00000494132 ZNF806P0C7X5 589 aa15.14■□□□□ 0.01
ATG4B-224ENST00000494132 KRT3P12035 628 aa15.14■□□□□ 0.01
ATG4B-224ENST00000494132 GPD1P21695 349 aa15.14■□□□□ 0.01
ATG4B-224ENST00000494132 ITPKAP23677 461 aa15.14■□□□□ 0.01
ATG4B-224ENST00000494132 ST8SIA6P61647 398 aa15.14■□□□□ 0.01
ATG4B-224ENST00000494132 CAMK2GQ13555 558 aaPredicted RBP15.14■□□□□ 0.01
ATG4B-224ENST00000494132 TTC39BQ5VTQ0 682 aaPredicted RBP15.14■□□□□ 0.01
ATG4B-224ENST00000494132 ACAD10Q6JQN1 1059 aa15.14■□□□□ 0.01
ATG4B-224ENST00000494132 DNAJC24Q6P3W2 148 aa15.14■□□□□ 0.01
ATG4B-224ENST00000494132 WDR59Q6PJI9 974 aa15.14■□□□□ 0.01
ATG4B-224ENST00000494132 ZNF571Q7Z3V5 609 aaPredicted RBP15.14■□□□□ 0.01
ATG4B-224ENST00000494132 TFAP2DQ7Z6R9 452 aa15.14■□□□□ 0.01
ATG4B-224ENST00000494132 SLC41A1Q8IVJ1 513 aa15.14■□□□□ 0.01
ATG4B-224ENST00000494132 C3orf20Q8ND61 904 aa15.14■□□□□ 0.01
ATG4B-224ENST00000494132 PRCCQ92733 491 aaPredicted RBP15.14■□□□□ 0.01
ATG4B-224ENST00000494132 MCEEQ96PE7 176 aa15.14■□□□□ 0.01
ATG4B-224ENST00000494132 TMEM74BQ9NUR3 256 aa15.14■□□□□ 0.01
ATG4B-224ENST00000494132 IFNKQ9P0W0 207 aa15.14■□□□□ 0.01
ATG4B-224ENST00000494132 MYO6Q9UM54 1294 aa15.14■□□□□ 0.01
ATG4B-224ENST00000494132 PCDHGA5Q9Y5G8 931 aa15.14■□□□□ 0.01
ATG4B-224ENST00000494132 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.13■□□□□ 0.01
ATG4B-224ENST00000494132 E9PAM4 449 aa15.13■□□□□ 0.01
ATG4B-224ENST00000494132 AP5Z1O43299 807 aa15.13■□□□□ 0.01
ATG4B-224ENST00000494132 PLXNA2O75051 1894 aa15.13■□□□□ 0.01
ATG4B-224ENST00000494132 ASLP04424 464 aa15.13■□□□□ 0.01
ATG4B-224ENST00000494132 ACADMP11310 421 aa15.13■□□□□ 0.01
ATG4B-224ENST00000494132 VAV1P15498 845 aa15.13■□□□□ 0.01
ATG4B-224ENST00000494132 RRM1P23921 792 aa15.13■□□□□ 0.01
ATG4B-224ENST00000494132 TPMTP51580 245 aa15.13■□□□□ 0.01
ATG4B-224ENST00000494132 RPL7AP62424 266 aaKnown RBP15.13■□□□□ 0.01
ATG4B-224ENST00000494132 ZNF177Q13360 481 aaPredicted RBP15.13■□□□□ 0.01
ATG4B-224ENST00000494132 E2F5Q15329 346 aa15.13■□□□□ 0.01
ATG4B-224ENST00000494132 RNF219Q5W0B1 726 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms