RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 RIN3Q8TB24 985 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 UCMAQ8WVF2 138 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 RSAD2Q8WXG1 361 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 HAUS1Q96CS2 278 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 FAF2Q96CS3 445 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 LRRC3BQ96PB8 259 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 OSBPL8Q9BZF1 889 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 MUC3BQ9H195 1237 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 LINC00597Q9H2U6 94 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 ANLNQ9NQW6 1124 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 ARHGEF4Q9NR80 690 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 TMPRSS4Q9NRS4 437 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 DNAJC17Q9NVM6 304 aaKnown RBP15.34■□□□□ 0.05
ACTB-213ENST00000493945 CWC15Q9P013 229 aaKnown RBP15.34■□□□□ 0.05
ACTB-213ENST00000493945 DNAI1Q9UI46 699 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 FBXL21Q9UKT6 434 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 MRPS17Q9Y2R5 130 aaKnown RBP15.34■□□□□ 0.05
ACTB-213ENST00000493945 TCF20Q9UGU0 1960 aaKnown RBP15.33■□□□□ 0.05
ACTB-213ENST00000493945 GOLGA6L10A0A0M3HER8 536 aa15.33■□□□□ 0.04
ACTB-213ENST00000493945 ILVBLA1L0T0 632 aa15.33■□□□□ 0.04
ACTB-213ENST00000493945 PI4K2BG5E9Z4 385 aa15.33■□□□□ 0.04
ACTB-213ENST00000493945 TRDMT1O14717 391 aaKnown RBP15.33■□□□□ 0.04
ACTB-213ENST00000493945 DDX3YO15523 660 aaKnown RBP15.33■□□□□ 0.04
ACTB-213ENST00000493945 APODP05090 189 aa15.33■□□□□ 0.04
ACTB-213ENST00000493945 PRLRP16471 622 aa15.33■□□□□ 0.04
ACTB-213ENST00000493945 ERCC2P18074 760 aa15.33■□□□□ 0.04
ACTB-213ENST00000493945 HOXD9P28356 352 aaPredicted RBP15.33■□□□□ 0.04
ACTB-213ENST00000493945 CDKN2BP42772 138 aa15.33■□□□□ 0.04
ACTB-213ENST00000493945 NR2C2P49116 596 aa15.33■□□□□ 0.04
ACTB-213ENST00000493945 PEX5P50542 639 aa15.33■□□□□ 0.04
ACTB-213ENST00000493945 NDST2P52849 883 aa15.33■□□□□ 0.04
ACTB-213ENST00000493945 PRKCQQ04759 706 aa15.33■□□□□ 0.04
ACTB-213ENST00000493945 SULT2A1Q06520 285 aa15.33■□□□□ 0.04
ACTB-213ENST00000493945 DPYSQ14117 519 aa15.33■□□□□ 0.04
ACTB-213ENST00000493945 RHBDF2Q6PJF5 856 aa15.33■□□□□ 0.04
ACTB-213ENST00000493945 NYAP1Q6ZVC0 841 aa15.33■□□□□ 0.04
ACTB-213ENST00000493945 TFAP2DQ7Z6R9 452 aa15.33■□□□□ 0.04
ACTB-213ENST00000493945 TMEM25Q86YD3 366 aa15.33■□□□□ 0.04
ACTB-213ENST00000493945 KIF18AQ8NI77 898 aa15.33■□□□□ 0.04
ACTB-213ENST00000493945 FIBINQ8TAL6 211 aa15.33■□□□□ 0.04
ACTB-213ENST00000493945 NSMCE1Q8WV22 266 aa15.33■□□□□ 0.04
ACTB-213ENST00000493945 RAPGEF5Q92565 580 aa15.33■□□□□ 0.04
ACTB-213ENST00000493945 TSC1Q92574 1164 aa15.33■□□□□ 0.04
ACTB-213ENST00000493945 BHMTQ93088 406 aa15.33■□□□□ 0.04
ACTB-213ENST00000493945 IGSF8Q969P0 613 aa15.33■□□□□ 0.04
ACTB-213ENST00000493945 ASIC4Q96FT7 647 aa15.33■□□□□ 0.04
ACTB-213ENST00000493945 RNF157Q96PX1 679 aa15.33■□□□□ 0.04
ACTB-213ENST00000493945 C2orf49Q9BVC5 232 aaPredicted RBP15.33■□□□□ 0.04
ACTB-213ENST00000493945 TLR10Q9BXR5 811 aa15.33■□□□□ 0.04
ACTB-213ENST00000493945 FRMD8P1Q9BZ68 369 aaPredicted RBP15.33■□□□□ 0.04
ACTB-213ENST00000493945 MAGEH1Q9H213 219 aa15.33■□□□□ 0.04
ACTB-213ENST00000493945 HPS4Q9NQG7 708 aa15.33■□□□□ 0.04
ACTB-213ENST00000493945 RNF14Q9UBS8 474 aa15.33■□□□□ 0.04
ACTB-213ENST00000493945 SNX12Q9UMY4 172 aa15.33■□□□□ 0.04
ACTB-213ENST00000493945 SAR1BQ9Y6B6 198 aa15.33■□□□□ 0.04
ACTB-213ENST00000493945 PIAS3Q9Y6X2 628 aa15.33■□□□□ 0.04
ACTB-213ENST00000493945 KIAA1549LQ6ZVL6 1849 aa15.32■□□□□ 0.04
ACTB-213ENST00000493945 hCG_1818297A0A087WSY0 165 aa15.32■□□□□ 0.04
ACTB-213ENST00000493945 ZSCAN5CA6NGD5 496 aaPredicted RBP15.32■□□□□ 0.04
ACTB-213ENST00000493945 I6L893 689 aaPredicted RBP15.32■□□□□ 0.04
ACTB-213ENST00000493945 ARNTLO00327 626 aa15.32■□□□□ 0.04
ACTB-213ENST00000493945 GFRA2O00451 464 aa15.32■□□□□ 0.04
ACTB-213ENST00000493945 ENC1O14682 589 aa15.32■□□□□ 0.04
ACTB-213ENST00000493945 PPP1R12AO14974 1030 aaPredicted RBP15.32■□□□□ 0.04
ACTB-213ENST00000493945 GJA4P35212 333 aa15.32■□□□□ 0.04
ACTB-213ENST00000493945 PAFAH1B1P43034 410 aa15.32■□□□□ 0.04
ACTB-213ENST00000493945 MARCKSL1P49006 195 aa15.32■□□□□ 0.04
ACTB-213ENST00000493945 ARSEP51690 589 aa15.32■□□□□ 0.04
ACTB-213ENST00000493945 TUBB2AQ13885 445 aa15.32■□□□□ 0.04
ACTB-213ENST00000493945 POLD3Q15054 466 aaPredicted RBP15.32■□□□□ 0.04
ACTB-213ENST00000493945 EIF4HQ15056 248 aaKnown RBP15.32■□□□□ 0.04
ACTB-213ENST00000493945 ATP13A4Q4VNC1 1196 aa15.32■□□□□ 0.04
ACTB-213ENST00000493945 RNF219Q5W0B1 726 aaPredicted RBP15.32■□□□□ 0.04
ACTB-213ENST00000493945 KAZNQ674X7 775 aa15.32■□□□□ 0.04
ACTB-213ENST00000493945 MFSD7Q6UXD7 560 aa15.32■□□□□ 0.04
ACTB-213ENST00000493945 C14orf80Q86SX3 495 aa15.32■□□□□ 0.04
ACTB-213ENST00000493945 METTL3Q86U44 580 aaKnown RBP15.32■□□□□ 0.04
ACTB-213ENST00000493945 CPNE8Q86YQ8 564 aa15.32■□□□□ 0.04
ACTB-213ENST00000493945 RNF135Q8IUD6 432 aa15.32■□□□□ 0.04
ACTB-213ENST00000493945 ZNF683Q8IZ20 524 aa15.32■□□□□ 0.04
ACTB-213ENST00000493945 CFAP52Q8N1V2 620 aa15.32■□□□□ 0.04
ACTB-213ENST00000493945 C17orf53Q8N3J3 647 aaPredicted RBP15.32■□□□□ 0.04
ACTB-213ENST00000493945 ALG3Q92685 438 aa15.32■□□□□ 0.04
ACTB-213ENST00000493945 P3H4Q92791 437 aa15.32■□□□□ 0.04
ACTB-213ENST00000493945 PNKPQ96T60 521 aa15.32■□□□□ 0.04
ACTB-213ENST00000493945 RPP25Q9BUL9 199 aaKnown RBP15.32■□□□□ 0.04
ACTB-213ENST00000493945 TUBB2BQ9BVA1 445 aa15.32■□□□□ 0.04
ACTB-213ENST00000493945 BRD8Q9H0E9 1235 aa15.32■□□□□ 0.04
ACTB-213ENST00000493945 HOMER3Q9NSC5 361 aa15.32■□□□□ 0.04
ACTB-213ENST00000493945 PLK2Q9NYY3 685 aa15.32■□□□□ 0.04
ACTB-213ENST00000493945 GTSE1Q9NYZ3 720 aa15.32■□□□□ 0.04
ACTB-213ENST00000493945 MPP6Q9NZW5 540 aa15.32■□□□□ 0.04
ACTB-213ENST00000493945 SLC8A2Q9UPR5 921 aa15.32■□□□□ 0.04
ACTB-213ENST00000493945 TBC1D30Q9Y2I9 924 aa15.32■□□□□ 0.04
ACTB-213ENST00000493945 SLC27A6Q9Y2P4 619 aa15.32■□□□□ 0.04
ACTB-213ENST00000493945 SNX10Q9Y5X0 201 aa15.32■□□□□ 0.04
ACTB-213ENST00000493945 MYOFQ9NZM1 2061 aa15.32■□□□□ 0.04
ACTB-213ENST00000493945 ESPNB1AK53 854 aa15.31■□□□□ 0.04
ACTB-213ENST00000493945 SPECC1L-ADORA2AF8WAN1 911 aa15.31■□□□□ 0.04
ACTB-213ENST00000493945 FAM72CH0Y354 149 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms