RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 PMS2CLQ68D20 193 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 KIAA1211LQ6NV74 962 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 Q6ZNB5 142 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 TPGS1Q6ZTW0 290 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 HTR3DQ70Z44 454 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 INTS8Q75QN2 995 aaKnown RBP8.49□□□□□ -1.05
HDAC6-234ENST00000493923 SND1Q7KZF4 910 aaKnown RBP eCLIP8.49□□□□□ -1.05
HDAC6-234ENST00000493923 UBR7Q8N806 425 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 KAT5Q92993 513 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 ACDQ96AP0 544 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 LOXL4Q96JB6 756 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 CNOT6LQ96LI5 555 aaKnown RBP8.49□□□□□ -1.05
HDAC6-234ENST00000493923 TRAPPC9Q96Q05 1148 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 GORASP1Q9BQQ3 440 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 ZSWIM1Q9BR11 485 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 NT5C1AQ9BXI3 368 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 DUSP16Q9BY84 665 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 TSGA10Q9BZW7 698 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 VCXQ9H320 206 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 CYP3A43Q9HB55 503 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 CYLDQ9NQC7 956 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 FSCN3Q9NQT6 498 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 CISHQ9NSE2 258 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 FANCLQ9NW38 375 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 ZNHIT6Q9NWK9 470 aaKnown RBP8.49□□□□□ -1.05
HDAC6-234ENST00000493923 COMMD8Q9NX08 183 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 EHD2Q9NZN4 543 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 ITGB1BP2Q9UKP3 347 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 CLEC4EQ9ULY5 219 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 PCDHA5Q9Y5H7 936 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 USP3Q9Y6I4 520 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 ZFYVE26Q68DK2 2539 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 ZZEF1O43149 2961 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 CFAP47Q6ZTR5 3102 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 A0A1W2PQF6 199 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 TCRBV21S2A2A0A5A6 115 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 WASH3PC4AMC7 463 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 STC2O76061 302 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 PENKP01210 267 aaPredicted RBP8.48□□□□□ -1.05
HDAC6-234ENST00000493923 ADRB1P08588 477 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 PAEPP09466 180 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 KRT13P13646 458 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 P4HA1P13674 534 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 PRLRP16471 622 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 ALDH3A1P30838 453 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 GBP1P32455 592 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 P2RY2P41231 377 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 PTGER3P43115 390 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 TNFRSF4P43489 277 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 MXI1P50539 228 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 ELF3P78545 371 aaPredicted RBP8.48□□□□□ -1.05
HDAC6-234ENST00000493923 MRPS21P82921 87 aaKnown RBP8.48□□□□□ -1.05
HDAC6-234ENST00000493923 GAD2Q05329 585 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 ITIH4Q14624 930 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 SKIDA1Q1XH10 827 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 EDRF1Q3B7T1 1238 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 C10orf120Q5SQS8 335 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 C10orf76Q5T2E6 689 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 ACBD5Q5T8D3 534 aaPredicted RBP8.48□□□□□ -1.05
HDAC6-234ENST00000493923 KRT39Q6A163 491 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 ARMCX6Q7L4S7 300 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 DDX42Q86XP3 938 aaKnown RBP eCLIP8.48□□□□□ -1.05
HDAC6-234ENST00000493923 IFT20Q8IY31 132 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 TMEFF1Q8IYR6 380 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 ARHGAP18Q8N392 663 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 DEFB119Q8N690 84 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 KIAA1958Q8N8K9 716 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 TERB1Q8NA31 727 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 CCDC63Q8NA47 563 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 SPATA20Q8TB22 786 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 HMGB4Q8WW32 186 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 ATP6V1G3Q96LB4 118 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 RMDN2Q96LZ7 410 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 HEXIM2Q96MH2 286 aaKnown RBP8.48□□□□□ -1.05
HDAC6-234ENST00000493923 DUSP9Q99956 384 aaKnown RBP8.48□□□□□ -1.05
HDAC6-234ENST00000493923 DESI2Q9BSY9 194 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 TRIM4Q9C037 500 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 CNOT10Q9H9A5 744 aaKnown RBP8.48□□□□□ -1.05
HDAC6-234ENST00000493923 TLR8Q9NR97 1041 aaKnown RBP8.48□□□□□ -1.05
HDAC6-234ENST00000493923 TMEM74BQ9NUR3 256 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 DNAJC17Q9NVM6 304 aaKnown RBP8.48□□□□□ -1.05
HDAC6-234ENST00000493923 HAUS2Q9NVX0 235 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 RAB20Q9NX57 234 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 TBC1D14Q9P2M4 693 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 RNF14Q9UBS8 474 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 NAGPAQ9UK23 515 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 PCDHGA4Q9Y5G9 962 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 RAD54BQ9Y620 910 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 GMEB1Q9Y692 573 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 CABIN1Q9Y6J0 2220 aa8.48□□□□□ -1.05
HDAC6-234ENST00000493923 SPEGQ15772 3267 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 LNP1A1A4G5 178 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 TBC1D3BA6NDS4 549 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 C4orf47A7E2U8 309 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 NEDD8-MDP1E9PL57 170 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 RNF225M0QZC1 329 aaPredicted RBP8.47□□□□□ -1.05
HDAC6-234ENST00000493923 CETN3O15182 167 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 KRT86O43790 486 aa8.47□□□□□ -1.05
HDAC6-234ENST00000493923 SMIM24O75264 130 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms