RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 FAM72CH0Y354 149 aa12.8□□□□□ -0.36
SNX17-208ENST00000493711 HOXC11O43248 304 aaPredicted RBP12.8□□□□□ -0.36
SNX17-208ENST00000493711 TJP3O95049 919 aa12.8□□□□□ -0.36
SNX17-208ENST00000493711 PENKP01210 267 aaPredicted RBP12.8□□□□□ -0.36
SNX17-208ENST00000493711 SP100P23497 879 aaPredicted RBP12.8□□□□□ -0.36
SNX17-208ENST00000493711 GDI1P31150 447 aa12.8□□□□□ -0.36
SNX17-208ENST00000493711 SLC6A4P31645 630 aa12.8□□□□□ -0.36
SNX17-208ENST00000493711 SERPINB6P35237 376 aa12.8□□□□□ -0.36
SNX17-208ENST00000493711 ETFBP38117 255 aa12.8□□□□□ -0.36
SNX17-208ENST00000493711 CDKN2BP42772 138 aa12.8□□□□□ -0.36
SNX17-208ENST00000493711 MAPKAPK2P49137 400 aa12.8□□□□□ -0.36
SNX17-208ENST00000493711 ZP2Q05996 745 aa12.8□□□□□ -0.36
SNX17-208ENST00000493711 ZNF177Q13360 481 aaPredicted RBP12.8□□□□□ -0.36
SNX17-208ENST00000493711 TDGQ13569 410 aa12.8□□□□□ -0.36
SNX17-208ENST00000493711 RUNX3Q13761 415 aa12.8□□□□□ -0.36
SNX17-208ENST00000493711 DHCR24Q15392 516 aa12.8□□□□□ -0.36
SNX17-208ENST00000493711 ITPRIPL2Q3MIP1 535 aa12.8□□□□□ -0.36
SNX17-208ENST00000493711 ANKRD20A8PQ5CZ79 823 aa12.8□□□□□ -0.36
SNX17-208ENST00000493711 FAM72AQ5TYM5 149 aa12.8□□□□□ -0.36
SNX17-208ENST00000493711 RNF43Q68DV7 783 aa12.8□□□□□ -0.36
SNX17-208ENST00000493711 FAM72DQ6L9T8 149 aa12.8□□□□□ -0.36
SNX17-208ENST00000493711 RFWD3Q6PCD5 774 aa12.8□□□□□ -0.36
SNX17-208ENST00000493711 SYT10Q6XYQ8 523 aa12.8□□□□□ -0.36
SNX17-208ENST00000493711 ZNF783Q6ZMS7 281 aa12.8□□□□□ -0.36
SNX17-208ENST00000493711 BZW1Q7L1Q6 419 aaKnown RBP12.8□□□□□ -0.36
SNX17-208ENST00000493711 SETD3Q86TU7 594 aaPredicted RBP12.8□□□□□ -0.36
SNX17-208ENST00000493711 FAM72BQ86X60 149 aa12.8□□□□□ -0.36
SNX17-208ENST00000493711 PYROXD2Q8N2H3 581 aa12.8□□□□□ -0.36
SNX17-208ENST00000493711 SLC44A3Q8N4M1 653 aa12.8□□□□□ -0.36
SNX17-208ENST00000493711 RTL3Q8N8U3 475 aaKnown RBP12.8□□□□□ -0.36
SNX17-208ENST00000493711 RIN3Q8TB24 985 aa12.8□□□□□ -0.36
SNX17-208ENST00000493711 CSGALNACT1Q8TDX6 532 aa12.8□□□□□ -0.36
SNX17-208ENST00000493711 MSANTD3Q96H12 275 aa12.8□□□□□ -0.36
SNX17-208ENST00000493711 RNF157Q96PX1 679 aa12.8□□□□□ -0.36
SNX17-208ENST00000493711 XPO6Q96QU8 1125 aaKnown RBP12.8□□□□□ -0.36
SNX17-208ENST00000493711 PLA2G2FQ9BZM2 168 aa12.8□□□□□ -0.36
SNX17-208ENST00000493711 LINC00597Q9H2U6 94 aa12.8□□□□□ -0.36
SNX17-208ENST00000493711 TMEM248Q9NWD8 314 aa12.8□□□□□ -0.36
SNX17-208ENST00000493711 RNF14Q9UBS8 474 aa12.8□□□□□ -0.36
SNX17-208ENST00000493711 PACSIN2Q9UNF0 486 aaPredicted RBP12.8□□□□□ -0.36
SNX17-208ENST00000493711 RAD54BQ9Y620 910 aa12.8□□□□□ -0.36
SNX17-208ENST00000493711 MYO16Q9Y6X6 1858 aa12.79□□□□□ -0.36
SNX17-208ENST00000493711 PI4K2BG5E9Z4 385 aa12.79□□□□□ -0.36
SNX17-208ENST00000493711 ENC1O14682 589 aa12.79□□□□□ -0.36
SNX17-208ENST00000493711 TSPAN3O60637 253 aa12.79□□□□□ -0.36
SNX17-208ENST00000493711 TBL1XO60907 577 aa12.79□□□□□ -0.36
SNX17-208ENST00000493711 ZNF189O75820 626 aaPredicted RBP12.79□□□□□ -0.36
SNX17-208ENST00000493711 ATP1A1P05023 1023 aaKnown RBP12.79□□□□□ -0.36
SNX17-208ENST00000493711 CYP17A1P05093 508 aa12.79□□□□□ -0.36
SNX17-208ENST00000493711 PYGMP11217 842 aa12.79□□□□□ -0.36
SNX17-208ENST00000493711 ADH5P11766 374 aa12.79□□□□□ -0.36
SNX17-208ENST00000493711 GLULP15104 373 aa12.79□□□□□ -0.36
SNX17-208ENST00000493711 GOT1P17174 413 aa12.79□□□□□ -0.36
SNX17-208ENST00000493711 MARCKSL1P49006 195 aa12.79□□□□□ -0.36
SNX17-208ENST00000493711 SLC12A1Q13621 1099 aa12.79□□□□□ -0.36
SNX17-208ENST00000493711 DPYSQ14117 519 aa12.79□□□□□ -0.36
SNX17-208ENST00000493711 GRM2Q14416 872 aa12.79□□□□□ -0.36
SNX17-208ENST00000493711 LY6G5CQ5SRR4 150 aa12.79□□□□□ -0.36
SNX17-208ENST00000493711 C6orf118Q5T5N4 469 aa12.79□□□□□ -0.36
SNX17-208ENST00000493711 C1orf228Q6PIY5 440 aa12.79□□□□□ -0.36
SNX17-208ENST00000493711 RHBDF2Q6PJF5 856 aa12.79□□□□□ -0.36
SNX17-208ENST00000493711 TMCO3Q6UWJ1 677 aa12.79□□□□□ -0.36
SNX17-208ENST00000493711 MFSD7Q6UXD7 560 aa12.79□□□□□ -0.36
SNX17-208ENST00000493711 C14orf80Q86SX3 495 aa12.79□□□□□ -0.36
SNX17-208ENST00000493711 RFX6Q8HWS3 928 aa12.79□□□□□ -0.36
SNX17-208ENST00000493711 LRRC49Q8IUZ0 686 aa12.79□□□□□ -0.36
SNX17-208ENST00000493711 TTC13Q8NBP0 860 aa12.79□□□□□ -0.36
SNX17-208ENST00000493711 KIF18AQ8NI77 898 aa12.79□□□□□ -0.36
SNX17-208ENST00000493711 IGSF8Q969P0 613 aa12.79□□□□□ -0.36
SNX17-208ENST00000493711 PRICKLE1Q96MT3 831 aaPredicted RBP12.79□□□□□ -0.36
SNX17-208ENST00000493711 BBS2Q9BXC9 721 aa12.79□□□□□ -0.36
SNX17-208ENST00000493711 OSBPL8Q9BZF1 889 aa12.79□□□□□ -0.36
SNX17-208ENST00000493711 ECT2Q9H8V3 914 aa12.79□□□□□ -0.36
SNX17-208ENST00000493711 ARHGEF4Q9NR80 690 aa12.79□□□□□ -0.36
SNX17-208ENST00000493711 TTC7AQ9ULT0 858 aaPredicted RBP12.79□□□□□ -0.36
SNX17-208ENST00000493711 SAR1BQ9Y6B6 198 aa12.79□□□□□ -0.36
SNX17-208ENST00000493711 hCG_1818297A0A087WSY0 165 aa12.78□□□□□ -0.36
SNX17-208ENST00000493711 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.78□□□□□ -0.36
SNX17-208ENST00000493711 H0Y626 953 aa12.78□□□□□ -0.36
SNX17-208ENST00000493711 APOL1O14791 398 aa12.78□□□□□ -0.36
SNX17-208ENST00000493711 NCAM2O15394 837 aa12.78□□□□□ -0.36
SNX17-208ENST00000493711 LUC7L3O95232 432 aaKnown RBP12.78□□□□□ -0.36
SNX17-208ENST00000493711 SRFP11831 508 aa12.78□□□□□ -0.36
SNX17-208ENST00000493711 ERCC2P18074 760 aa12.78□□□□□ -0.36
SNX17-208ENST00000493711 TGM2P21980 687 aa12.78□□□□□ -0.36
SNX17-208ENST00000493711 IL4RP24394 825 aa12.78□□□□□ -0.36
SNX17-208ENST00000493711 EIF2DP41214 584 aaKnown RBP12.78□□□□□ -0.36
SNX17-208ENST00000493711 NR2C2P49116 596 aa12.78□□□□□ -0.36
SNX17-208ENST00000493711 DNA2P51530 1060 aa12.78□□□□□ -0.36
SNX17-208ENST00000493711 NDST2P52849 883 aa12.78□□□□□ -0.36
SNX17-208ENST00000493711 YBEYP58557 167 aaPredicted RBP12.78□□□□□ -0.36
SNX17-208ENST00000493711 RPS24P62847 133 aaKnown RBP12.78□□□□□ -0.36
SNX17-208ENST00000493711 CDH18Q13634 790 aa12.78□□□□□ -0.36
SNX17-208ENST00000493711 E2F5Q15329 346 aa12.78□□□□□ -0.36
SNX17-208ENST00000493711 ANO4Q32M45 955 aa12.78□□□□□ -0.36
SNX17-208ENST00000493711 CCDC181Q5TID7 509 aa12.78□□□□□ -0.36
SNX17-208ENST00000493711 FYB2Q5VWT5 728 aa12.78□□□□□ -0.36
SNX17-208ENST00000493711 TPGS1Q6ZTW0 290 aa12.78□□□□□ -0.36
SNX17-208ENST00000493711 NUDT18Q6ZVK8 323 aa12.78□□□□□ -0.36
SNX17-208ENST00000493711 BBS12Q6ZW61 710 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms