RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 USP18Q9UMW8 372 aa7.2□□□□□ -1.26
TOP3A-207ENST00000493648 LUC7L2Q9Y383 392 aaKnown RBP7.2□□□□□ -1.26
TOP3A-207ENST00000493648 PCDHGA5Q9Y5G8 931 aa7.2□□□□□ -1.26
TOP3A-207ENST00000493648 RAD54BQ9Y620 910 aa7.2□□□□□ -1.26
TOP3A-207ENST00000493648 ZFHX2Q9C0A1 2572 aaPredicted RBP7.2□□□□□ -1.26
TOP3A-207ENST00000493648 THADAQ6YHU6 1953 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 TARSL2A2RTX5 802 aaKnown RBP7.19□□□□□ -1.26
TOP3A-207ENST00000493648 C2CD4BA6NLJ0 364 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 DRGXA6NNA5 263 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 AP5Z1O43299 807 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 SRGAP2O75044 1071 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 RTN2O75298 545 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 NDUFS2O75306 463 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 EPN2O95208 641 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 FTLP02792 175 aaPredicted RBP7.19□□□□□ -1.26
TOP3A-207ENST00000493648 SERPING1P05155 500 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 ACADMP11310 421 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 SKILP12757 684 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 NDUFV2P19404 249 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 SDHBP21912 280 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 RRM1P23921 792 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 PRKCHP24723 683 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 OXTRP30559 389 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 ADRA1BP35368 520 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 PBX1P40424 430 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 CSKP41240 450 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 PTPN9P43378 593 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 DHPSP49366 369 aaPredicted RBP7.19□□□□□ -1.26
TOP3A-207ENST00000493648 PLK1P53350 603 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 ATXN1P54253 815 aaKnown RBP7.19□□□□□ -1.26
TOP3A-207ENST00000493648 ZBED6P86452 979 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 SPEM2Q0P670 501 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 SFSWAPQ12872 951 aaKnown RBP7.19□□□□□ -1.26
TOP3A-207ENST00000493648 CAMK2GQ13555 558 aaPredicted RBP7.19□□□□□ -1.26
TOP3A-207ENST00000493648 CSRP2Q16527 193 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 PTPRNQ16849 979 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 CDO1Q16878 200 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 TSR1Q2NL82 804 aaKnown RBP7.19□□□□□ -1.26
TOP3A-207ENST00000493648 C15orf59Q2T9L4 293 aaPredicted RBP7.19□□□□□ -1.26
TOP3A-207ENST00000493648 MAP7D1Q3KQU3 841 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 PLEKHG6Q3KR16 790 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 FUT11Q495W5 492 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 C5orf22Q49AR2 442 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 OTUD1Q5VV17 481 aaPredicted RBP7.19□□□□□ -1.26
TOP3A-207ENST00000493648 PMS2CLQ68D20 193 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 TRNP1Q6NT89 227 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 WDR59Q6PJI9 974 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 KIAA1324Q6UXG2 1013 aaKnown RBP7.19□□□□□ -1.26
TOP3A-207ENST00000493648 MON1BQ7L1V2 547 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 ZNF571Q7Z3V5 609 aaPredicted RBP7.19□□□□□ -1.26
TOP3A-207ENST00000493648 BNIPLQ7Z465 357 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 C14orf80Q86SX3 495 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 SETD3Q86TU7 594 aaPredicted RBP7.19□□□□□ -1.26
TOP3A-207ENST00000493648 FAM131BQ86XD5 332 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 TMPRSS6Q8IU80 811 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 APCDD1Q8J025 514 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 OR2T3Q8NH03 318 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 JOSD2Q8TAC2 188 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 WFDC5Q8TCV5 224 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 FAM172AQ8WUF8 416 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 CENPIQ92674 756 aaPredicted RBP7.19□□□□□ -1.26
TOP3A-207ENST00000493648 TRIM11Q96F44 468 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 SIPA1Q96FS4 1042 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 SYT11Q9BT88 431 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.19□□□□□ -1.26
TOP3A-207ENST00000493648 ADAM33Q9BZ11 813 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 XPO4Q9C0E2 1151 aaKnown RBP7.19□□□□□ -1.26
TOP3A-207ENST00000493648 TTYH3Q9C0H2 523 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 ARRDC1-AS1Q9H2J1 176 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 FBRSQ9HAH7 460 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 CD248Q9HCU0 757 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 SEMA4GQ9NTN9 838 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 PARVAQ9NVD7 372 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 INTS6Q9UL03 887 aaKnown RBP7.19□□□□□ -1.26
TOP3A-207ENST00000493648 ERVW-1Q9UQF0 538 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 PTPRZ1P23471 2315 aaPredicted RBP7.19□□□□□ -1.26
TOP3A-207ENST00000493648 SPAG17Q6Q759 2223 aa7.19□□□□□ -1.26
TOP3A-207ENST00000493648 ABCA7Q8IZY2 2146 aa7.18□□□□□ -1.26
TOP3A-207ENST00000493648 PIEZO1Q92508 2521 aa7.18□□□□□ -1.26
TOP3A-207ENST00000493648 IGLV3-10A0A075B6K4 115 aa7.18□□□□□ -1.26
TOP3A-207ENST00000493648 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.18□□□□□ -1.26
TOP3A-207ENST00000493648 IGHV1OR15-9A0A0B4J2B8 117 aa7.18□□□□□ -1.26
TOP3A-207ENST00000493648 BCLAF3A2AJT9 711 aaKnown RBP7.18□□□□□ -1.26
TOP3A-207ENST00000493648 PRR5-ARHGAP8B1AHC4 643 aa7.18□□□□□ -1.26
TOP3A-207ENST00000493648 E9PAM4 449 aa7.18□□□□□ -1.26
TOP3A-207ENST00000493648 DDX3XO00571 662 aaKnown RBP eCLIP7.18□□□□□ -1.26
TOP3A-207ENST00000493648 RNASEH1O60930 286 aaKnown RBP7.18□□□□□ -1.26
TOP3A-207ENST00000493648 GJB6O95452 261 aa7.18□□□□□ -1.26
TOP3A-207ENST00000493648 DNTTP04053 509 aa7.18□□□□□ -1.26
TOP3A-207ENST00000493648 RHOCP08134 193 aa7.18□□□□□ -1.26
TOP3A-207ENST00000493648 TPM1P09493 284 aa7.18□□□□□ -1.26
TOP3A-207ENST00000493648 ZNF806P0C7X5 589 aa7.18□□□□□ -1.26
TOP3A-207ENST00000493648 MYBL1P10243 752 aa7.18□□□□□ -1.26
TOP3A-207ENST00000493648 HLA-EP13747 358 aa7.18□□□□□ -1.26
TOP3A-207ENST00000493648 BCKDHBP21953 392 aa7.18□□□□□ -1.26
TOP3A-207ENST00000493648 MZF1P28698 734 aaPredicted RBP7.18□□□□□ -1.26
TOP3A-207ENST00000493648 CD6P30203 668 aa7.18□□□□□ -1.26
TOP3A-207ENST00000493648 OR1E1P30953 314 aa7.18□□□□□ -1.26
TOP3A-207ENST00000493648 DPP6P42658 865 aa7.18□□□□□ -1.26
TOP3A-207ENST00000493648 ZNF143P52747 638 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms