RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 WDR24Q96S15 920 aa16.21■□□□□ 0.19
HPS4-216ENST00000493455 SLC2A4RGQ9NR83 387 aa16.21■□□□□ 0.19
HPS4-216ENST00000493455 PPARGC1AQ9UBK2 798 aaKnown RBP16.21■□□□□ 0.19
HPS4-216ENST00000493455 NEU3Q9UQ49 428 aa16.21■□□□□ 0.19
HPS4-216ENST00000493455 NUP205Q92621 2012 aa16.2■□□□□ 0.18
HPS4-216ENST00000493455 IGLV3-10A0A075B6K4 115 aa16.2■□□□□ 0.18
HPS4-216ENST00000493455 DRGXA6NNA5 263 aa16.2■□□□□ 0.18
HPS4-216ENST00000493455 FGF10O15520 208 aaPredicted RBP16.2■□□□□ 0.18
HPS4-216ENST00000493455 TULP3O75386 442 aa16.2■□□□□ 0.18
HPS4-216ENST00000493455 CLDN11O75508 207 aa16.2■□□□□ 0.18
HPS4-216ENST00000493455 KRT10P13645 584 aa16.2■□□□□ 0.18
HPS4-216ENST00000493455 RHOQP17081 205 aa16.2■□□□□ 0.18
HPS4-216ENST00000493455 CD72P21854 359 aa16.2■□□□□ 0.18
HPS4-216ENST00000493455 CXCR5P32302 372 aa16.2■□□□□ 0.18
HPS4-216ENST00000493455 PEX5P50542 639 aa16.2■□□□□ 0.18
HPS4-216ENST00000493455 PON2Q15165 354 aa16.2■□□□□ 0.18
HPS4-216ENST00000493455 SLC44A4Q53GD3 710 aa16.2■□□□□ 0.18
HPS4-216ENST00000493455 FSCBQ5H9T9 825 aa16.2■□□□□ 0.18
HPS4-216ENST00000493455 SEL1L2Q5TEA6 688 aa16.2■□□□□ 0.18
HPS4-216ENST00000493455 CHST9Q7L1S5 443 aa16.2■□□□□ 0.18
HPS4-216ENST00000493455 ANKS1BQ7Z6G8 1248 aa16.2■□□□□ 0.18
HPS4-216ENST00000493455 CCDC33Q8N5R6 958 aa16.2■□□□□ 0.18
HPS4-216ENST00000493455 EXD1Q8NHP7 514 aa16.2■□□□□ 0.18
HPS4-216ENST00000493455 CELF6Q96J87 481 aaKnown RBP16.2■□□□□ 0.18
HPS4-216ENST00000493455 ZNF670Q9BS34 389 aa16.2■□□□□ 0.18
HPS4-216ENST00000493455 HEMGNQ9BXL5 484 aa16.2■□□□□ 0.18
HPS4-216ENST00000493455 TLR10Q9BXR5 811 aa16.2■□□□□ 0.18
HPS4-216ENST00000493455 MUC3BQ9H195 1237 aa16.2■□□□□ 0.18
HPS4-216ENST00000493455 ARHGEF4Q9NR80 690 aa16.2■□□□□ 0.18
HPS4-216ENST00000493455 KCND1Q9NSA2 647 aa16.2■□□□□ 0.18
HPS4-216ENST00000493455 ABCB8Q9NUT2 735 aa16.2■□□□□ 0.18
HPS4-216ENST00000493455 NDFIP2Q9NV92 336 aa16.2■□□□□ 0.18
HPS4-216ENST00000493455 ETNK2Q9NVF9 386 aa16.2■□□□□ 0.18
HPS4-216ENST00000493455 DEC1Q9P2X7 70 aa16.2■□□□□ 0.18
HPS4-216ENST00000493455 JRKLQ9Y4A0 524 aa16.2■□□□□ 0.18
HPS4-216ENST00000493455 SHROOM3Q8TF72 1996 aa16.19■□□□□ 0.18
HPS4-216ENST00000493455 C3orf70A6NLC5 250 aaPredicted RBP16.19■□□□□ 0.18
HPS4-216ENST00000493455 CACNG3O60359 315 aa16.19■□□□□ 0.18
HPS4-216ENST00000493455 PYGMP11217 842 aa16.19■□□□□ 0.18
HPS4-216ENST00000493455 CTHP32929 405 aa16.19■□□□□ 0.18
HPS4-216ENST00000493455 CD70P32970 193 aa16.19■□□□□ 0.18
HPS4-216ENST00000493455 OPRD1P41143 372 aa16.19■□□□□ 0.18
HPS4-216ENST00000493455 CETN2P41208 172 aa16.19■□□□□ 0.18
HPS4-216ENST00000493455 CSKP41240 450 aa16.19■□□□□ 0.18
HPS4-216ENST00000493455 AMPD2Q01433 879 aa16.19■□□□□ 0.18
HPS4-216ENST00000493455 LMAN2Q12907 356 aa16.19■□□□□ 0.18
HPS4-216ENST00000493455 DPYSQ14117 519 aa16.19■□□□□ 0.18
HPS4-216ENST00000493455 MLF2Q15773 248 aaPredicted RBP16.19■□□□□ 0.18
HPS4-216ENST00000493455 GAB4Q2WGN9 574 aa16.19■□□□□ 0.18
HPS4-216ENST00000493455 C5orf22Q49AR2 442 aa16.19■□□□□ 0.18
HPS4-216ENST00000493455 CCDC181Q5TID7 509 aa16.19■□□□□ 0.18
HPS4-216ENST00000493455 DCAF12L1Q5VU92 463 aa16.19■□□□□ 0.18
HPS4-216ENST00000493455 RNF219Q5W0B1 726 aaPredicted RBP16.19■□□□□ 0.18
HPS4-216ENST00000493455 ASTLQ6HA08 431 aaPredicted RBP16.19■□□□□ 0.18
HPS4-216ENST00000493455 TXNDC11Q6PKC3 985 aa16.19■□□□□ 0.18
HPS4-216ENST00000493455 TMCO3Q6UWJ1 677 aa16.19■□□□□ 0.18
HPS4-216ENST00000493455 SYT10Q6XYQ8 523 aa16.19■□□□□ 0.18
HPS4-216ENST00000493455 ZSCAN30Q86W11 494 aa16.19■□□□□ 0.18
HPS4-216ENST00000493455 RTL3Q8N8U3 475 aaKnown RBP16.19■□□□□ 0.18
HPS4-216ENST00000493455 PCDH19Q8TAB3 1148 aa16.19■□□□□ 0.18
HPS4-216ENST00000493455 TSC1Q92574 1164 aa16.19■□□□□ 0.18
HPS4-216ENST00000493455 HAUS1Q96CS2 278 aa16.19■□□□□ 0.18
HPS4-216ENST00000493455 P2RY13Q9BPV8 354 aa16.19■□□□□ 0.18
HPS4-216ENST00000493455 C8orf33Q9H7E9 229 aaPredicted RBP16.19■□□□□ 0.18
HPS4-216ENST00000493455 ARHGEF3Q9NR81 526 aa16.19■□□□□ 0.18
HPS4-216ENST00000493455 TMEM248Q9NWD8 314 aa16.19■□□□□ 0.18
HPS4-216ENST00000493455 NDRG2Q9UN36 371 aaKnown RBP16.19■□□□□ 0.18
HPS4-216ENST00000493455 hCG_1818297A0A087WSY0 165 aa16.18■□□□□ 0.18
HPS4-216ENST00000493455 DFFAO00273 331 aa16.18■□□□□ 0.18
HPS4-216ENST00000493455 STK25O00506 426 aa16.18■□□□□ 0.18
HPS4-216ENST00000493455 APOL1O14791 398 aa16.18■□□□□ 0.18
HPS4-216ENST00000493455 MAP3K6O95382 1288 aa16.18■□□□□ 0.18
HPS4-216ENST00000493455 IL4RP24394 825 aa16.18■□□□□ 0.18
HPS4-216ENST00000493455 MZF1P28698 734 aaPredicted RBP16.18■□□□□ 0.18
HPS4-216ENST00000493455 HOXC13P31276 330 aa16.18■□□□□ 0.18
HPS4-216ENST00000493455 HTR7P34969 479 aa16.18■□□□□ 0.18
HPS4-216ENST00000493455 CDKN2BP42772 138 aa16.18■□□□□ 0.18
HPS4-216ENST00000493455 GALK1P51570 392 aa16.18■□□□□ 0.18
HPS4-216ENST00000493455 ZNF135P52742 658 aaPredicted RBP16.18■□□□□ 0.18
HPS4-216ENST00000493455 TFDP3Q5H9I0 405 aa16.18■□□□□ 0.18
HPS4-216ENST00000493455 MPP7Q5T2T1 576 aa16.18■□□□□ 0.18
HPS4-216ENST00000493455 ARTNQ5T4W7 220 aa16.18■□□□□ 0.18
HPS4-216ENST00000493455 C6orf118Q5T5N4 469 aa16.18■□□□□ 0.18
HPS4-216ENST00000493455 C1orf228Q6PIY5 440 aa16.18■□□□□ 0.18
HPS4-216ENST00000493455 NLRP14Q86W24 1093 aa16.18■□□□□ 0.18
HPS4-216ENST00000493455 UBALD2Q8IYN6 164 aa16.18■□□□□ 0.18
HPS4-216ENST00000493455 SIX5Q8N196 739 aa16.18■□□□□ 0.18
HPS4-216ENST00000493455 OR7D4Q8NG98 312 aa16.18■□□□□ 0.18
HPS4-216ENST00000493455 OR52K2Q8NGK3 314 aa16.18■□□□□ 0.18
HPS4-216ENST00000493455 FAM71BQ8TC56 605 aa16.18■□□□□ 0.18
HPS4-216ENST00000493455 ZNF592Q92610 1267 aa16.18■□□□□ 0.18
HPS4-216ENST00000493455 RNF157Q96PX1 679 aa16.18■□□□□ 0.18
HPS4-216ENST00000493455 PNKPQ96T60 521 aa16.18■□□□□ 0.18
HPS4-216ENST00000493455 NAPGQ99747 312 aaPredicted RBP16.18■□□□□ 0.18
HPS4-216ENST00000493455 SPON2Q9BUD6 331 aa16.18■□□□□ 0.18
HPS4-216ENST00000493455 KIAA1522Q9P206 1035 aaPredicted RBP16.18■□□□□ 0.18
HPS4-216ENST00000493455 RCOR3Q9P2K3 495 aaPredicted RBP16.18■□□□□ 0.18
HPS4-216ENST00000493455 GGA2Q9UJY4 613 aa16.18■□□□□ 0.18
HPS4-216ENST00000493455 ATG2BQ96BY7 2078 aa16.18■□□□□ 0.18
HPS4-216ENST00000493455 NYNRINQ9P2P1 1898 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms