RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 CYP1A2P05177 515 aa13.17□□□□□ -0.3
CLIP2-209ENST00000493166 ATP5BP06576 529 aaKnown RBP13.17□□□□□ -0.3
CLIP2-209ENST00000493166 HOXA6P31267 233 aa13.17□□□□□ -0.3
CLIP2-209ENST00000493166 HOXC13P31276 330 aa13.17□□□□□ -0.3
CLIP2-209ENST00000493166 PXNP49023 591 aaPredicted RBP13.17□□□□□ -0.3
CLIP2-209ENST00000493166 FNTBP49356 437 aa13.17□□□□□ -0.3
CLIP2-209ENST00000493166 DGKEP52429 567 aa13.17□□□□□ -0.3
CLIP2-209ENST00000493166 AIF1P55008 147 aa13.17□□□□□ -0.3
CLIP2-209ENST00000493166 CDH4P55283 916 aa13.17□□□□□ -0.3
CLIP2-209ENST00000493166 OXCT1P55809 520 aa13.17□□□□□ -0.3
CLIP2-209ENST00000493166 DMWDQ09019 674 aa13.17□□□□□ -0.3
CLIP2-209ENST00000493166 ZNF252P-AS1Q0IIN9 211 aa13.17□□□□□ -0.3
CLIP2-209ENST00000493166 SCAPQ12770 1279 aa13.17□□□□□ -0.3
CLIP2-209ENST00000493166 ZNF234Q14588 700 aa13.17□□□□□ -0.3
CLIP2-209ENST00000493166 CRY1Q16526 586 aa13.17□□□□□ -0.3
CLIP2-209ENST00000493166 PITRM1Q5JRX3 1037 aa13.17□□□□□ -0.3
CLIP2-209ENST00000493166 EFHC2Q5JST6 749 aa13.17□□□□□ -0.3
CLIP2-209ENST00000493166 TMEM92Q6UXU6 159 aa13.17□□□□□ -0.3
CLIP2-209ENST00000493166 CYB5D2Q8WUJ1 264 aa13.17□□□□□ -0.3
CLIP2-209ENST00000493166 ATRIPQ8WXE1 791 aa13.17□□□□□ -0.3
CLIP2-209ENST00000493166 CTNNBL1Q8WYA6 563 aaPredicted RBP13.17□□□□□ -0.3
CLIP2-209ENST00000493166 ARHGEF26Q96DR7 871 aa13.17□□□□□ -0.3
CLIP2-209ENST00000493166 LMLNQ96KR4 655 aa13.17□□□□□ -0.3
CLIP2-209ENST00000493166 TRIM7Q9C029 511 aa13.17□□□□□ -0.3
CLIP2-209ENST00000493166 OSBPL2Q9H1P3 480 aa13.17□□□□□ -0.3
CLIP2-209ENST00000493166 POLMQ9NP87 494 aaPredicted RBP13.17□□□□□ -0.3
CLIP2-209ENST00000493166 THAP10Q9P2Z0 257 aaPredicted RBP13.17□□□□□ -0.3
CLIP2-209ENST00000493166 OR12D3Q9UGF7 316 aa13.17□□□□□ -0.3
CLIP2-209ENST00000493166 ANAPC7Q9UJX3 599 aa13.17□□□□□ -0.3
CLIP2-209ENST00000493166 PLA2G4CQ9UP65 541 aa13.17□□□□□ -0.3
CLIP2-209ENST00000493166 PCDHGA2Q9Y5H1 932 aa13.17□□□□□ -0.3
CLIP2-209ENST00000493166 STON1Q9Y6Q2 735 aa13.17□□□□□ -0.3
CLIP2-209ENST00000493166 R4GN57 208 aa13.17□□□□□ -0.3
CLIP2-209ENST00000493166 USP34Q70CQ2 3546 aa13.17□□□□□ -0.3
CLIP2-209ENST00000493166 DRGXA6NNA5 263 aa13.16□□□□□ -0.3
CLIP2-209ENST00000493166 CNTN5O94779 1100 aa13.16□□□□□ -0.3
CLIP2-209ENST00000493166 H2AFZP0C0S5 128 aa13.16□□□□□ -0.3
CLIP2-209ENST00000493166 CSKP41240 450 aa13.16□□□□□ -0.3
CLIP2-209ENST00000493166 IL12RB1P42701 662 aa13.16□□□□□ -0.3
CLIP2-209ENST00000493166 NRG1Q02297 640 aaPredicted RBP13.16□□□□□ -0.3
CLIP2-209ENST00000493166 SLC12A1Q13621 1099 aa13.16□□□□□ -0.3
CLIP2-209ENST00000493166 FNDC3BQ53EP0 1204 aaKnown RBP13.16□□□□□ -0.3
CLIP2-209ENST00000493166 ALFQ53S48 1182 aa13.16□□□□□ -0.3
CLIP2-209ENST00000493166 ANO7Q6IWH7 933 aa13.16□□□□□ -0.3
CLIP2-209ENST00000493166 CXorf57Q6NSI4 855 aaKnown RBP13.16□□□□□ -0.3
CLIP2-209ENST00000493166 RWDD4Q6NW29 188 aaKnown RBP13.16□□□□□ -0.3
CLIP2-209ENST00000493166 SERPINA13PQ6UXR4 307 aa13.16□□□□□ -0.3
CLIP2-209ENST00000493166 H2AFVQ71UI9 128 aa13.16□□□□□ -0.3
CLIP2-209ENST00000493166 TFAP2DQ7Z6R9 452 aa13.16□□□□□ -0.3
CLIP2-209ENST00000493166 LONP2Q86WA8 852 aa13.16□□□□□ -0.3
CLIP2-209ENST00000493166 NELL1Q92832 810 aa13.16□□□□□ -0.3
CLIP2-209ENST00000493166 PPP1R9BQ96SB3 815 aa13.16□□□□□ -0.3
CLIP2-209ENST00000493166 GABRG3Q99928 467 aa13.16□□□□□ -0.3
CLIP2-209ENST00000493166 NCAPGQ9BPX3 1015 aa13.16□□□□□ -0.3
CLIP2-209ENST00000493166 PACSIN1Q9BY11 444 aa13.16□□□□□ -0.3
CLIP2-209ENST00000493166 ZYG11BQ9C0D3 744 aa13.16□□□□□ -0.3
CLIP2-209ENST00000493166 MPP6Q9NZW5 540 aa13.16□□□□□ -0.3
CLIP2-209ENST00000493166 PPARGC1AQ9UBK2 798 aaKnown RBP13.16□□□□□ -0.3
CLIP2-209ENST00000493166 INTS6Q9UL03 887 aaKnown RBP13.16□□□□□ -0.3
CLIP2-209ENST00000493166 FZD10Q9ULW2 581 aa13.16□□□□□ -0.3
CLIP2-209ENST00000493166 RALGAPA1Q6GYQ0 2036 aa13.16□□□□□ -0.3
CLIP2-209ENST00000493166 THADAQ6YHU6 1953 aa13.16□□□□□ -0.3
CLIP2-209ENST00000493166 NUP205Q92621 2012 aa13.15□□□□□ -0.3
CLIP2-209ENST00000493166 TCRBV21S2A2A0A5A6 115 aa13.15□□□□□ -0.3
CLIP2-209ENST00000493166 WASH3PC4AMC7 463 aa13.15□□□□□ -0.3
CLIP2-209ENST00000493166 ZBTB24O43167 697 aaPredicted RBP13.15□□□□□ -0.3
CLIP2-209ENST00000493166 PRPSAP2O60256 369 aa13.15□□□□□ -0.3
CLIP2-209ENST00000493166 ASLP04424 464 aa13.15□□□□□ -0.3
CLIP2-209ENST00000493166 RHOCP08134 193 aa13.15□□□□□ -0.3
CLIP2-209ENST00000493166 DLDP09622 509 aaKnown RBP13.15□□□□□ -0.3
CLIP2-209ENST00000493166 TMEM253P0C7T8 217 aa13.15□□□□□ -0.3
CLIP2-209ENST00000493166 PRKCHP24723 683 aa13.15□□□□□ -0.3
CLIP2-209ENST00000493166 MZF1P28698 734 aaPredicted RBP13.15□□□□□ -0.3
CLIP2-209ENST00000493166 CDC25BP30305 580 aa13.15□□□□□ -0.3
CLIP2-209ENST00000493166 OR1E1P30953 314 aa13.15□□□□□ -0.3
CLIP2-209ENST00000493166 NBL1P41271 181 aa13.15□□□□□ -0.3
CLIP2-209ENST00000493166 NUMBP49757 651 aa13.15□□□□□ -0.3
CLIP2-209ENST00000493166 PIGHQ14442 188 aaPredicted RBP13.15□□□□□ -0.3
CLIP2-209ENST00000493166 STARD3Q14849 445 aa13.15□□□□□ -0.3
CLIP2-209ENST00000493166 ACAP1Q15027 740 aa13.15□□□□□ -0.3
CLIP2-209ENST00000493166 PLEKHG6Q3KR16 790 aa13.15□□□□□ -0.3
CLIP2-209ENST00000493166 C6orf118Q5T5N4 469 aa13.15□□□□□ -0.3
CLIP2-209ENST00000493166 WDR5BQ86VZ2 330 aa13.15□□□□□ -0.3
CLIP2-209ENST00000493166 APCDD1Q8J025 514 aa13.15□□□□□ -0.3
CLIP2-209ENST00000493166 ZBTB44Q8NCP5 570 aa13.15□□□□□ -0.3
CLIP2-209ENST00000493166 ZNF564Q8TBZ8 553 aaPredicted RBP13.15□□□□□ -0.3
CLIP2-209ENST00000493166 TTC17Q96AE7 1141 aa13.15□□□□□ -0.3
CLIP2-209ENST00000493166 TBC1D31Q96DN5 1066 aa13.15□□□□□ -0.3
CLIP2-209ENST00000493166 ERLEC1Q96DZ1 483 aa13.15□□□□□ -0.3
CLIP2-209ENST00000493166 BTBD6Q96KE9 485 aa13.15□□□□□ -0.3
CLIP2-209ENST00000493166 PANX2Q96RD6 677 aa13.15□□□□□ -0.3
CLIP2-209ENST00000493166 MUC3BQ9H195 1237 aa13.15□□□□□ -0.3
CLIP2-209ENST00000493166 BCCIPQ9P287 314 aaKnown RBP eCLIP13.15□□□□□ -0.3
CLIP2-209ENST00000493166 CTTNBP2NLQ9P2B4 639 aa13.15□□□□□ -0.3
CLIP2-209ENST00000493166 UVRAGQ9P2Y5 699 aa13.15□□□□□ -0.3
CLIP2-209ENST00000493166 PCSK1NQ9UHG2 260 aa13.15□□□□□ -0.3
CLIP2-209ENST00000493166 IP6K2Q9UHH9 426 aa13.15□□□□□ -0.3
CLIP2-209ENST00000493166 TBC1D30Q9Y2I9 924 aa13.15□□□□□ -0.3
CLIP2-209ENST00000493166 RAD54BQ9Y620 910 aa13.15□□□□□ -0.3
CLIP2-209ENST00000493166 CCDC163A0A0D9SF12 145 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms