RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 DUPD1Q68J44 220 aa14.49□□□□□ -0.09
PDZRN3-210ENST00000492909 NADSYN1Q6IA69 706 aa14.49□□□□□ -0.09
PDZRN3-210ENST00000492909 FBXL22Q6P050 247 aa14.49□□□□□ -0.09
PDZRN3-210ENST00000492909 CDKL3Q8IVW4 592 aaPredicted RBP14.49□□□□□ -0.09
PDZRN3-210ENST00000492909 ZNF683Q8IZ20 524 aa14.49□□□□□ -0.09
PDZRN3-210ENST00000492909 CCDC89Q8N998 374 aa14.49□□□□□ -0.09
PDZRN3-210ENST00000492909 SEC14L1Q92503 715 aa14.49□□□□□ -0.09
PDZRN3-210ENST00000492909 SMG7Q92540 1137 aaKnown RBP14.49□□□□□ -0.09
PDZRN3-210ENST00000492909 TCEAL4Q96EI5 215 aa14.49□□□□□ -0.09
PDZRN3-210ENST00000492909 SLC46A2Q9BY10 475 aa14.49□□□□□ -0.09
PDZRN3-210ENST00000492909 TRIM31Q9BZY9 425 aa14.49□□□□□ -0.09
PDZRN3-210ENST00000492909 ZYG11BQ9C0D3 744 aa14.49□□□□□ -0.09
PDZRN3-210ENST00000492909 NSUN3Q9H649 340 aaKnown RBP14.49□□□□□ -0.09
PDZRN3-210ENST00000492909 IGFLR1Q9H665 355 aa14.49□□□□□ -0.09
PDZRN3-210ENST00000492909 SFXN1Q9H9B4 322 aa14.49□□□□□ -0.09
PDZRN3-210ENST00000492909 DZANK1Q9NVP4 752 aa14.49□□□□□ -0.09
PDZRN3-210ENST00000492909 DONSONQ9NYP3 566 aa14.49□□□□□ -0.09
PDZRN3-210ENST00000492909 MPP6Q9NZW5 540 aa14.49□□□□□ -0.09
PDZRN3-210ENST00000492909 NEU2Q9Y3R4 380 aa14.49□□□□□ -0.09
PDZRN3-210ENST00000492909 C2orf16Q68DN1 1984 aa14.49□□□□□ -0.09
PDZRN3-210ENST00000492909 CFAP69A5D8W1 941 aa14.48□□□□□ -0.09
PDZRN3-210ENST00000492909 SOBPA7XYQ1 873 aa14.48□□□□□ -0.09
PDZRN3-210ENST00000492909 BHMG1C9JSJ3 638 aaPredicted RBP14.48□□□□□ -0.09
PDZRN3-210ENST00000492909 F5H5T6 163 aa14.48□□□□□ -0.09
PDZRN3-210ENST00000492909 NCAM2O15394 837 aa14.48□□□□□ -0.09
PDZRN3-210ENST00000492909 PAPLNO95428 1278 aa14.48□□□□□ -0.09
PDZRN3-210ENST00000492909 LATS1O95835 1130 aa14.48□□□□□ -0.09
PDZRN3-210ENST00000492909 KRT14P02533 472 aa14.48□□□□□ -0.09
PDZRN3-210ENST00000492909 POU3F3P20264 500 aaPredicted RBP14.48□□□□□ -0.09
PDZRN3-210ENST00000492909 TACR2P21452 398 aa14.48□□□□□ -0.09
PDZRN3-210ENST00000492909 STIP1P31948 543 aaKnown RBP14.48□□□□□ -0.09
PDZRN3-210ENST00000492909 CUL1Q13616 776 aa14.48□□□□□ -0.09
PDZRN3-210ENST00000492909 PDK1Q15118 436 aa14.48□□□□□ -0.09
PDZRN3-210ENST00000492909 TEAD2Q15562 447 aa14.48□□□□□ -0.09
PDZRN3-210ENST00000492909 SLC5A9Q2M3M2 681 aa14.48□□□□□ -0.09
PDZRN3-210ENST00000492909 ALS2CLQ60I27 953 aa14.48□□□□□ -0.09
PDZRN3-210ENST00000492909 LZTR1Q8N653 840 aa14.48□□□□□ -0.09
PDZRN3-210ENST00000492909 NPWQ8N729 165 aa14.48□□□□□ -0.09
PDZRN3-210ENST00000492909 RTL3Q8N8U3 475 aaKnown RBP14.48□□□□□ -0.09
PDZRN3-210ENST00000492909 VN1R2Q8NFZ6 395 aa14.48□□□□□ -0.09
PDZRN3-210ENST00000492909 CCHCR1Q8TD31 782 aa14.48□□□□□ -0.09
PDZRN3-210ENST00000492909 CASKIN2Q8WXE0 1202 aa14.48□□□□□ -0.09
PDZRN3-210ENST00000492909 RPRD1AQ96P16 312 aaPredicted RBP14.48□□□□□ -0.09
PDZRN3-210ENST00000492909 DDX50Q9BQ39 737 aaKnown RBP14.48□□□□□ -0.09
PDZRN3-210ENST00000492909 DPH5Q9H2P9 285 aa14.48□□□□□ -0.09
PDZRN3-210ENST00000492909 C10orf88Q9H8K7 445 aa14.48□□□□□ -0.09
PDZRN3-210ENST00000492909 FAM114A2Q9NRY5 505 aa14.48□□□□□ -0.09
PDZRN3-210ENST00000492909 ASIC3Q9UHC3 531 aa14.48□□□□□ -0.09
PDZRN3-210ENST00000492909 ZMYM5Q9UJ78 669 aa14.48□□□□□ -0.09
PDZRN3-210ENST00000492909 AGO1Q9UL18 857 aaKnown RBP14.48□□□□□ -0.09
PDZRN3-210ENST00000492909 COL6A3P12111 3177 aa14.48□□□□□ -0.09
PDZRN3-210ENST00000492909 GOLGA6L7A0A1B0GV03 622 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 BCLAF3A2AJT9 711 aaKnown RBP14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 WASH4PA8MWX3 477 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 HACD1B0YJ81 288 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 GOLGA8KD6RF30 607 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 PPP1R12AO14974 1030 aaPredicted RBP14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 MOSPD3O75425 235 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 IFNB1P01574 187 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 RHOQP17081 205 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 AVPR1AP37288 418 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 DRG2P55039 364 aaKnown RBP14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 NTHL1P78549 312 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 ZXDBP98169 803 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 TRIP13Q15645 432 aaPredicted RBP14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 SLC45A4Q5BKX6 768 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 FAM133BQ5BKY9 247 aaKnown RBP14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 PRSS36Q5K4E3 855 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 ADGRF1Q5T601 910 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 TMC5Q6UXY8 1006 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 CMTM8Q8IZV2 173 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 LGI2Q8N0V4 545 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 C12orf76Q8N812 135 aaPredicted RBP14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 FAM71DQ8N9W8 422 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 ADAMTS19Q8TE59 1207 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 TFB1MQ8WVM0 346 aaKnown RBP14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 IFT81Q8WYA0 676 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 IGSF8Q969P0 613 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 WBP2Q969T9 261 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 QKIQ96PU8 341 aaKnown RBP eCLIP14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 SH3GL2Q99962 352 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 TASP1Q9H6P5 420 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 PCDH9Q9HC56 1237 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 LMCD1Q9NZU5 365 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 LSM7Q9UK45 103 aaKnown RBP14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 SHROOM3Q8TF72 1996 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 DRGXA6NNA5 263 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 OPA1O60313 960 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 MX2P20592 715 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 RBL1P28749 1068 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 SLC6A4P31645 630 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 CARSP49589 748 aaKnown RBP14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 GDF10P55107 478 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 HYAL1Q12794 435 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 TRADDQ15628 312 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 B4GALNT4Q76KP1 1039 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 NLRP14Q86W24 1093 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 DDX42Q86XP3 938 aaKnown RBP eCLIP14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 CCDC33Q8N5R6 958 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 TMEM248Q9NWD8 314 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms