RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 LSM14AQ8ND56 463 aaKnown RBP13.67□□□□□ -0.22
HDAC3-213ENST00000492506 DDI1Q8WTU0 396 aa13.67□□□□□ -0.22
HDAC3-213ENST00000492506 CYB5D2Q8WUJ1 264 aa13.67□□□□□ -0.22
HDAC3-213ENST00000492506 NXPE2Q96DL1 559 aa13.67□□□□□ -0.22
HDAC3-213ENST00000492506 CDK5RAP1Q96SZ6 601 aaKnown RBP13.67□□□□□ -0.22
HDAC3-213ENST00000492506 DUSP16Q9BY84 665 aa13.67□□□□□ -0.22
HDAC3-213ENST00000492506 BTBD1Q9H0C5 482 aa13.67□□□□□ -0.22
HDAC3-213ENST00000492506 BLZF1Q9H2G9 400 aa13.67□□□□□ -0.22
HDAC3-213ENST00000492506 PRSS16Q9NQE7 514 aa13.67□□□□□ -0.22
HDAC3-213ENST00000492506 VPS18Q9P253 973 aa13.67□□□□□ -0.22
HDAC3-213ENST00000492506 MRFAP1Q9Y605 127 aa13.67□□□□□ -0.22
HDAC3-213ENST00000492506 COL6A6A6NMZ7 2263 aa13.66□□□□□ -0.22
HDAC3-213ENST00000492506 VILLO15195 856 aa13.66□□□□□ -0.22
HDAC3-213ENST00000492506 FSBPO95073 299 aa13.66□□□□□ -0.22
HDAC3-213ENST00000492506 CYBBP04839 570 aa13.66□□□□□ -0.22
HDAC3-213ENST00000492506 NEFHP12036 1026 aa13.66□□□□□ -0.22
HDAC3-213ENST00000492506 ZBTB16Q05516 673 aa13.66□□□□□ -0.22
HDAC3-213ENST00000492506 RTP5Q14D33 572 aa13.66□□□□□ -0.22
HDAC3-213ENST00000492506 ZKSCAN8Q15776 578 aaPredicted RBP13.66□□□□□ -0.22
HDAC3-213ENST00000492506 MAP9Q49MG5 647 aa13.66□□□□□ -0.22
HDAC3-213ENST00000492506 PPP1R26Q5T8A7 1209 aaPredicted RBP13.66□□□□□ -0.22
HDAC3-213ENST00000492506 SHC4Q6S5L8 630 aa13.66□□□□□ -0.22
HDAC3-213ENST00000492506 PCSK4Q6UW60 755 aa13.66□□□□□ -0.22
HDAC3-213ENST00000492506 GATAD2AQ86YP4 633 aa13.66□□□□□ -0.22
HDAC3-213ENST00000492506 SLC9A9Q8IVB4 645 aa13.66□□□□□ -0.22
HDAC3-213ENST00000492506 CCDC50Q8IVM0 306 aa13.66□□□□□ -0.22
HDAC3-213ENST00000492506 ENGASEQ8NFI3 743 aa13.66□□□□□ -0.22
HDAC3-213ENST00000492506 NT5C1AQ9BXI3 368 aa13.66□□□□□ -0.22
HDAC3-213ENST00000492506 EBF2Q9HAK2 575 aa13.66□□□□□ -0.22
HDAC3-213ENST00000492506 APOBEC3GQ9HC16 384 aaKnown RBP13.66□□□□□ -0.22
HDAC3-213ENST00000492506 MARCH2Q9P0N8 246 aa13.66□□□□□ -0.22
HDAC3-213ENST00000492506 ENC1O14682 589 aa13.65□□□□□ -0.22
HDAC3-213ENST00000492506 DFNA5O60443 496 aa13.65□□□□□ -0.22
HDAC3-213ENST00000492506 HLA-DRAP01903 254 aa13.65□□□□□ -0.22
HDAC3-213ENST00000492506 WNT1P04628 370 aa13.65□□□□□ -0.22
HDAC3-213ENST00000492506 JUPP14923 745 aa13.65□□□□□ -0.22
HDAC3-213ENST00000492506 BCAT1P54687 386 aa13.65□□□□□ -0.22
HDAC3-213ENST00000492506 RACK1P63244 317 aaKnown RBP13.65□□□□□ -0.22
HDAC3-213ENST00000492506 SEMG2Q02383 582 aa13.65□□□□□ -0.22
HDAC3-213ENST00000492506 DNAJC3Q13217 504 aa13.65□□□□□ -0.22
HDAC3-213ENST00000492506 CRYMQ14894 314 aa13.65□□□□□ -0.22
HDAC3-213ENST00000492506 TRIP4Q15650 581 aaPredicted RBP13.65□□□□□ -0.22
HDAC3-213ENST00000492506 INAVAQ3KP66 663 aa13.65□□□□□ -0.22
HDAC3-213ENST00000492506 FNDC3BQ53EP0 1204 aaKnown RBP13.65□□□□□ -0.22
HDAC3-213ENST00000492506 RAB41Q5JT25 222 aa13.65□□□□□ -0.22
HDAC3-213ENST00000492506 PRAMEF14Q5SWL7 426 aa13.65□□□□□ -0.22
HDAC3-213ENST00000492506 C6orf118Q5T5N4 469 aa13.65□□□□□ -0.22
HDAC3-213ENST00000492506 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.65□□□□□ -0.22
HDAC3-213ENST00000492506 TMC2Q8TDI7 906 aa13.65□□□□□ -0.22
HDAC3-213ENST00000492506 FAM210AQ96ND0 272 aa13.65□□□□□ -0.22
HDAC3-213ENST00000492506 PARD6BQ9BYG5 372 aa13.65□□□□□ -0.22
HDAC3-213ENST00000492506 KCTD10Q9H3F6 313 aa13.65□□□□□ -0.22
HDAC3-213ENST00000492506 FBRSQ9HAH7 460 aa13.65□□□□□ -0.22
HDAC3-213ENST00000492506 SGK2Q9HBY8 427 aa13.65□□□□□ -0.22
HDAC3-213ENST00000492506 STOML2Q9UJZ1 356 aa13.65□□□□□ -0.22
HDAC3-213ENST00000492506 PVALEFA0A1B0GWK0 134 aa13.64□□□□□ -0.23
HDAC3-213ENST00000492506 SLC12A8A0AV02 714 aa13.64□□□□□ -0.23
HDAC3-213ENST00000492506 CCDC189A1A4V9 331 aa13.64□□□□□ -0.23
HDAC3-213ENST00000492506 CYSRT1A8MQ03 144 aa13.64□□□□□ -0.23
HDAC3-213ENST00000492506 EBAG9O00559 213 aa13.64□□□□□ -0.23
HDAC3-213ENST00000492506 IKBKBO14920 756 aa13.64□□□□□ -0.23
HDAC3-213ENST00000492506 CHUKO15111 745 aa13.64□□□□□ -0.23
HDAC3-213ENST00000492506 PPP6R2O75170 966 aa13.64□□□□□ -0.23
HDAC3-213ENST00000492506 SEC31AO94979 1220 aaKnown RBP13.64□□□□□ -0.23
HDAC3-213ENST00000492506 C1SP09871 688 aa13.64□□□□□ -0.23
HDAC3-213ENST00000492506 ACADVLP49748 655 aa13.64□□□□□ -0.23
HDAC3-213ENST00000492506 ARID5AQ03989 594 aa13.64□□□□□ -0.23
HDAC3-213ENST00000492506 TARDBPQ13148 414 aaKnown RBP eCLIP13.64□□□□□ -0.23
HDAC3-213ENST00000492506 CUL4BQ13620 913 aa13.64□□□□□ -0.23
HDAC3-213ENST00000492506 STK38Q15208 465 aa13.64□□□□□ -0.23
HDAC3-213ENST00000492506 CAMK4Q16566 473 aa13.64□□□□□ -0.23
HDAC3-213ENST00000492506 MPPE1Q53F39 396 aa13.64□□□□□ -0.23
HDAC3-213ENST00000492506 KIAA0895LQ68EN5 471 aa13.64□□□□□ -0.23
HDAC3-213ENST00000492506 FBXL19Q6PCT2 694 aa13.64□□□□□ -0.23
HDAC3-213ENST00000492506 TRIM65Q6PJ69 517 aa13.64□□□□□ -0.23
HDAC3-213ENST00000492506 LRRC31Q6UY01 552 aa13.64□□□□□ -0.23
HDAC3-213ENST00000492506 MICALCLQ6ZW33 695 aa13.64□□□□□ -0.23
HDAC3-213ENST00000492506 CHST9Q7L1S5 443 aa13.64□□□□□ -0.23
HDAC3-213ENST00000492506 BHLHA9Q7RTU4 235 aa13.64□□□□□ -0.23
HDAC3-213ENST00000492506 KIAA0895Q8NCT3 520 aa13.64□□□□□ -0.23
HDAC3-213ENST00000492506 SNIP1Q8TAD8 396 aaKnown RBP13.64□□□□□ -0.23
HDAC3-213ENST00000492506 SAP25Q8TEE9 199 aa13.64□□□□□ -0.23
HDAC3-213ENST00000492506 WFIKKN2Q8TEU8 576 aa13.64□□□□□ -0.23
HDAC3-213ENST00000492506 PLD4Q96BZ4 506 aa13.64□□□□□ -0.23
HDAC3-213ENST00000492506 CABS1Q96KC9 395 aa13.64□□□□□ -0.23
HDAC3-213ENST00000492506 SLC6A18Q96N87 628 aa13.64□□□□□ -0.23
HDAC3-213ENST00000492506 FCRL3Q96P31 734 aaPredicted RBP13.64□□□□□ -0.23
HDAC3-213ENST00000492506 ELF4Q99607 663 aaPredicted RBP13.64□□□□□ -0.23
HDAC3-213ENST00000492506 ACE2Q9BYF1 805 aaPredicted RBP13.64□□□□□ -0.23
HDAC3-213ENST00000492506 NRSN2Q9GZP1 204 aa13.64□□□□□ -0.23
HDAC3-213ENST00000492506 CYP3A43Q9HB55 503 aa13.64□□□□□ -0.23
HDAC3-213ENST00000492506 PLA2G4CQ9UP65 541 aa13.64□□□□□ -0.23
HDAC3-213ENST00000492506 A0A1W2PPC4 97 aa13.63□□□□□ -0.23
HDAC3-213ENST00000492506 KLHL33A6NCF5 533 aa13.63□□□□□ -0.23
HDAC3-213ENST00000492506 WNT9AO14904 365 aa13.63□□□□□ -0.23
HDAC3-213ENST00000492506 SPTLC2O15270 562 aa13.63□□□□□ -0.23
HDAC3-213ENST00000492506 KLRC4O43908 158 aa13.63□□□□□ -0.23
HDAC3-213ENST00000492506 RFPL3O75679 317 aa13.63□□□□□ -0.23
HDAC3-213ENST00000492506 LDOC1O95751 146 aaPredicted RBP13.63□□□□□ -0.23
HDAC3-213ENST00000492506 DNTTP04053 509 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms