RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 SLC36A4Q6YBV0 504 aa12.18□□□□□ -0.46
MDC1-207ENST00000492462 METTL3Q86U44 580 aaKnown RBP12.18□□□□□ -0.46
MDC1-207ENST00000492462 SYT12Q8IV01 421 aa12.18□□□□□ -0.46
MDC1-207ENST00000492462 APCDD1Q8J025 514 aa12.18□□□□□ -0.46
MDC1-207ENST00000492462 CCAR2Q8N163 923 aaKnown RBP12.18□□□□□ -0.46
MDC1-207ENST00000492462 OR52K2Q8NGK3 314 aa12.18□□□□□ -0.46
MDC1-207ENST00000492462 OR2T3Q8NH03 318 aa12.18□□□□□ -0.46
MDC1-207ENST00000492462 SLC30A5Q8TAD4 765 aa12.18□□□□□ -0.46
MDC1-207ENST00000492462 TTC17Q96AE7 1141 aa12.18□□□□□ -0.46
MDC1-207ENST00000492462 SIPA1Q96FS4 1042 aa12.18□□□□□ -0.46
MDC1-207ENST00000492462 TOE1Q96GM8 510 aaKnown RBP12.18□□□□□ -0.46
MDC1-207ENST00000492462 PCMTD1Q96MG8 357 aaPredicted RBP12.18□□□□□ -0.46
MDC1-207ENST00000492462 HSPA12BQ96MM6 686 aa12.18□□□□□ -0.46
MDC1-207ENST00000492462 TBCBQ99426 244 aa12.18□□□□□ -0.46
MDC1-207ENST00000492462 RAB6CQ9H0N0 254 aa12.18□□□□□ -0.46
MDC1-207ENST00000492462 ITM2CQ9NQX7 267 aa12.18□□□□□ -0.46
MDC1-207ENST00000492462 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.18□□□□□ -0.46
MDC1-207ENST00000492462 PILRBQ9UKJ0 227 aa12.18□□□□□ -0.46
MDC1-207ENST00000492462 VANGL2Q9ULK5 521 aa12.18□□□□□ -0.46
MDC1-207ENST00000492462 PLA2G4CQ9UP65 541 aa12.18□□□□□ -0.46
MDC1-207ENST00000492462 HS3ST4Q9Y661 456 aa12.18□□□□□ -0.46
MDC1-207ENST00000492462 NYNRINQ9P2P1 1898 aaKnown RBP12.17□□□□□ -0.46
MDC1-207ENST00000492462 TYW5A2RUC4 315 aaKnown RBP12.17□□□□□ -0.46
MDC1-207ENST00000492462 C4orf47A7E2U8 309 aa12.17□□□□□ -0.46
MDC1-207ENST00000492462 H0Y626 953 aa12.17□□□□□ -0.46
MDC1-207ENST00000492462 KHNYNO15037 678 aaKnown RBP12.17□□□□□ -0.46
MDC1-207ENST00000492462 TEX33O43247 280 aa12.17□□□□□ -0.46
MDC1-207ENST00000492462 AP5Z1O43299 807 aa12.17□□□□□ -0.46
MDC1-207ENST00000492462 GJB6O95452 261 aa12.17□□□□□ -0.46
MDC1-207ENST00000492462 LSM8O95777 96 aaKnown RBP12.17□□□□□ -0.46
MDC1-207ENST00000492462 CYP1A1P04798 512 aaPredicted RBP12.17□□□□□ -0.46
MDC1-207ENST00000492462 ATP5BP06576 529 aaKnown RBP12.17□□□□□ -0.46
MDC1-207ENST00000492462 SLC2A3P11169 496 aa12.17□□□□□ -0.46
MDC1-207ENST00000492462 PDGFRAP16234 1089 aa12.17□□□□□ -0.46
MDC1-207ENST00000492462 ABCB4P21439 1286 aa12.17□□□□□ -0.46
MDC1-207ENST00000492462 MAOBP27338 520 aa12.17□□□□□ -0.46
MDC1-207ENST00000492462 MZF1P28698 734 aaPredicted RBP12.17□□□□□ -0.46
MDC1-207ENST00000492462 CD6P30203 668 aa12.17□□□□□ -0.46
MDC1-207ENST00000492462 CXCR3P49682 368 aa12.17□□□□□ -0.46
MDC1-207ENST00000492462 SNX16P57768 344 aa12.17□□□□□ -0.46
MDC1-207ENST00000492462 CDR2Q01850 454 aa12.17□□□□□ -0.46
MDC1-207ENST00000492462 PLEKHG6Q3KR16 790 aa12.17□□□□□ -0.46
MDC1-207ENST00000492462 TRIM61Q5EBN2 209 aa12.17□□□□□ -0.46
MDC1-207ENST00000492462 PPM1JQ5JR12 505 aa12.17□□□□□ -0.46
MDC1-207ENST00000492462 CXorf57Q6NSI4 855 aaKnown RBP12.17□□□□□ -0.46
MDC1-207ENST00000492462 FAM124AQ86V42 546 aa12.17□□□□□ -0.46
MDC1-207ENST00000492462 ZDHHC17Q8IUH5 632 aa12.17□□□□□ -0.46
MDC1-207ENST00000492462 DHX40Q8IX18 779 aaKnown RBP12.17□□□□□ -0.46
MDC1-207ENST00000492462 EMC1Q8N766 993 aa12.17□□□□□ -0.46
MDC1-207ENST00000492462 NEK11Q8NG66 645 aa12.17□□□□□ -0.46
MDC1-207ENST00000492462 PRCCQ92733 491 aaPredicted RBP12.17□□□□□ -0.46
MDC1-207ENST00000492462 NT5C3BQ969T7 300 aa12.17□□□□□ -0.46
MDC1-207ENST00000492462 ERGIC2Q96RQ1 377 aa12.17□□□□□ -0.46
MDC1-207ENST00000492462 GPR174Q9BXC1 333 aa12.17□□□□□ -0.46
MDC1-207ENST00000492462 SIK2Q9H0K1 926 aa12.17□□□□□ -0.46
MDC1-207ENST00000492462 WSB2Q9NYS7 404 aaPredicted RBP12.17□□□□□ -0.46
MDC1-207ENST00000492462 SLCO3A1Q9UIG8 710 aa12.17□□□□□ -0.46
MDC1-207ENST00000492462 TMEM59LQ9UK28 342 aa12.17□□□□□ -0.46
MDC1-207ENST00000492462 PCDH15Q96QU1 1955 aa12.17□□□□□ -0.46
MDC1-207ENST00000492462 TTC34A8MYJ7 566 aa12.16□□□□□ -0.46
MDC1-207ENST00000492462 CDX4O14627 284 aaPredicted RBP12.16□□□□□ -0.46
MDC1-207ENST00000492462 SIN3BO75182 1162 aa12.16□□□□□ -0.46
MDC1-207ENST00000492462 NDUFS2O75306 463 aa12.16□□□□□ -0.46
MDC1-207ENST00000492462 CNTN5O94779 1100 aa12.16□□□□□ -0.46
MDC1-207ENST00000492462 CFIP05156 583 aa12.16□□□□□ -0.46
MDC1-207ENST00000492462 SCNN1AP37088 669 aa12.16□□□□□ -0.46
MDC1-207ENST00000492462 STAT1P42224 750 aa12.16□□□□□ -0.46
MDC1-207ENST00000492462 STK19P49842 368 aaPredicted RBP12.16□□□□□ -0.46
MDC1-207ENST00000492462 RPS14P62263 151 aaKnown RBP12.16□□□□□ -0.46
MDC1-207ENST00000492462 SPDYCQ5MJ68 293 aa12.16□□□□□ -0.46
MDC1-207ENST00000492462 ARTNQ5T4W7 220 aa12.16□□□□□ -0.46
MDC1-207ENST00000492462 PEAR1Q5VY43 1037 aaPredicted RBP12.16□□□□□ -0.46
MDC1-207ENST00000492462 IL31Q6EBC2 164 aa12.16□□□□□ -0.46
MDC1-207ENST00000492462 ZNF683Q8IZ20 524 aa12.16□□□□□ -0.46
MDC1-207ENST00000492462 ANKRD20A12PQ8NF67 263 aa12.16□□□□□ -0.46
MDC1-207ENST00000492462 JOSD2Q8TAC2 188 aa12.16□□□□□ -0.46
MDC1-207ENST00000492462 ZNF419Q96HQ0 510 aaPredicted RBP12.16□□□□□ -0.46
MDC1-207ENST00000492462 RPL10LQ96L21 214 aaKnown RBP12.16□□□□□ -0.46
MDC1-207ENST00000492462 CFAP57Q96MR6 1250 aa12.16□□□□□ -0.46
MDC1-207ENST00000492462 RPRD1AQ96P16 312 aaPredicted RBP12.16□□□□□ -0.46
MDC1-207ENST00000492462 SPAG5Q96R06 1193 aa12.16□□□□□ -0.46
MDC1-207ENST00000492462 C11orf70Q9BRQ4 267 aa12.16□□□□□ -0.46
MDC1-207ENST00000492462 FUCA2Q9BTY2 467 aa12.16□□□□□ -0.46
MDC1-207ENST00000492462 TKTL2Q9H0I9 626 aa12.16□□□□□ -0.46
MDC1-207ENST00000492462 METTL5Q9NRN9 209 aaKnown RBP12.16□□□□□ -0.46
MDC1-207ENST00000492462 ARHGEF38Q9NXL2 777 aa12.16□□□□□ -0.46
MDC1-207ENST00000492462 KIAA1522Q9P206 1035 aaPredicted RBP12.16□□□□□ -0.46
MDC1-207ENST00000492462 SLC12A6Q9UHW9 1150 aa12.16□□□□□ -0.46
MDC1-207ENST00000492462 EVLQ9UI08 416 aaPredicted RBP12.16□□□□□ -0.46
MDC1-207ENST00000492462 ERVW-1Q9UQF0 538 aa12.16□□□□□ -0.46
MDC1-207ENST00000492462 DOCK4Q8N1I0 1966 aa12.16□□□□□ -0.46
MDC1-207ENST00000492462 A0A1B0GVM2 712 aa12.15□□□□□ -0.46
MDC1-207ENST00000492462 TCAF2A6NFQ2 919 aa12.15□□□□□ -0.46
MDC1-207ENST00000492462 IGLV3-19P01714 112 aa12.15□□□□□ -0.46
MDC1-207ENST00000492462 ASLP04424 464 aa12.15□□□□□ -0.46
MDC1-207ENST00000492462 UNGP13051 313 aaPredicted RBP12.15□□□□□ -0.46
MDC1-207ENST00000492462 VAV1P15498 845 aa12.15□□□□□ -0.46
MDC1-207ENST00000492462 KCNA4P22459 653 aa12.15□□□□□ -0.46
MDC1-207ENST00000492462 MMP8P22894 467 aa12.15□□□□□ -0.46
MDC1-207ENST00000492462 ACSL1P33121 698 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms