RNA–Protein interactions for RNA: ENST00000492348.6

RBBP4-214, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 1,547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-214ENST00000492348 PDGFAP04085 211 aa7.3□□□□□ -1.24
RBBP4-214ENST00000492348 RPLP1P05386 114 aaKnown RBP7.3□□□□□ -1.24
RBBP4-214ENST00000492348 NCAM1P13591 858 aa7.3□□□□□ -1.24
RBBP4-214ENST00000492348 FGFR3P22607 806 aa7.3□□□□□ -1.24
RBBP4-214ENST00000492348 GCAP28676 217 aa7.3□□□□□ -1.24
RBBP4-214ENST00000492348 HPDP32754 393 aaPredicted RBP7.3□□□□□ -1.24
RBBP4-214ENST00000492348 ADRA1BP35368 520 aa7.3□□□□□ -1.24
RBBP4-214ENST00000492348 PBX3P40426 434 aa7.3□□□□□ -1.24
RBBP4-214ENST00000492348 MAGEA6P43360 314 aa7.3□□□□□ -1.24
RBBP4-214ENST00000492348 SLCO1A2P46721 670 aa7.3□□□□□ -1.24
RBBP4-214ENST00000492348 CXCR3P49682 368 aa7.3□□□□□ -1.24
RBBP4-214ENST00000492348 AIF1P55008 147 aa7.3□□□□□ -1.24
RBBP4-214ENST00000492348 MAGOHP61326 146 aaKnown RBP7.3□□□□□ -1.24
RBBP4-214ENST00000492348 XRCC4Q13426 336 aa7.3□□□□□ -1.24
RBBP4-214ENST00000492348 EIF4EBP2Q13542 120 aaPredicted RBP7.3□□□□□ -1.24
RBBP4-214ENST00000492348 AUHQ13825 339 aaKnown RBP7.3□□□□□ -1.24
RBBP4-214ENST00000492348 MRPL58Q14197 206 aaKnown RBP7.3□□□□□ -1.24
RBBP4-214ENST00000492348 PRKD1Q15139 912 aaPredicted RBP7.3□□□□□ -1.24
RBBP4-214ENST00000492348 LONRF1Q17RB8 773 aa7.3□□□□□ -1.24
RBBP4-214ENST00000492348 ARTNQ5T4W7 220 aa7.3□□□□□ -1.24
RBBP4-214ENST00000492348 BSPRYQ5W0U4 402 aa7.3□□□□□ -1.24
RBBP4-214ENST00000492348 C4orf50Q6ZRC1 276 aa7.3□□□□□ -1.24
RBBP4-214ENST00000492348 RFX8Q6ZV50 586 aa7.3□□□□□ -1.24
RBBP4-214ENST00000492348 BEND5Q7L4P6 421 aa7.3□□□□□ -1.24
RBBP4-214ENST00000492348 SCD5Q86SK9 330 aa7.3□□□□□ -1.24
RBBP4-214ENST00000492348 SPATA2LQ8IUW3 424 aaPredicted RBP7.3□□□□□ -1.24
RBBP4-214ENST00000492348 CCDC13Q8IYE1 715 aa7.3□□□□□ -1.24
RBBP4-214ENST00000492348 AGGF1Q8N302 714 aaeCLIP7.3□□□□□ -1.24
RBBP4-214ENST00000492348 NETO2Q8NC67 525 aa7.3□□□□□ -1.24
RBBP4-214ENST00000492348 FAM193BQ96PV7 902 aaPredicted RBP7.3□□□□□ -1.24
RBBP4-214ENST00000492348 SLC9A7Q96T83 725 aa7.3□□□□□ -1.24
RBBP4-214ENST00000492348 GPR62Q9BZJ7 368 aa7.3□□□□□ -1.24
RBBP4-214ENST00000492348 SMOC2Q9H3U7 446 aa7.3□□□□□ -1.24
RBBP4-214ENST00000492348 HIPK3Q9H422 1215 aa7.3□□□□□ -1.24
RBBP4-214ENST00000492348 NMUR1Q9HB89 426 aa7.3□□□□□ -1.24
RBBP4-214ENST00000492348 DDIT4Q9NX09 232 aa7.3□□□□□ -1.24
RBBP4-214ENST00000492348 ABI2Q9NYB9 513 aaPredicted RBP7.3□□□□□ -1.24
RBBP4-214ENST00000492348 CTNNAL1Q9UBT7 734 aa7.3□□□□□ -1.24
RBBP4-214ENST00000492348 DCTN4Q9UJW0 460 aa7.3□□□□□ -1.24
RBBP4-214ENST00000492348 ADAM28Q9UKQ2 775 aa7.3□□□□□ -1.24
RBBP4-214ENST00000492348 TBX21Q9UL17 535 aa7.3□□□□□ -1.24
RBBP4-214ENST00000492348 PCDHB7Q9Y5E2 793 aa7.3□□□□□ -1.24
RBBP4-214ENST00000492348 SNX10Q9Y5X0 201 aa7.3□□□□□ -1.24
RBBP4-214ENST00000492348 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.3□□□□□ -1.24
RBBP4-214ENST00000492348 DOCK6Q96HP0 2047 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 TBKBP1A7MCY6 615 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 EEF2KO00418 725 aaKnown RBP7.29□□□□□ -1.24
RBBP4-214ENST00000492348 NDC80O14777 642 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 CAPN9O14815 690 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 RASGRF2O14827 1237 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 CHADO15335 359 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 EIF3HO15372 352 aaKnown RBP eCLIP7.29□□□□□ -1.24
RBBP4-214ENST00000492348 IRAK2O43187 625 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 TBC1D4O60343 1298 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 TCEA3O75764 348 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 VSIG8P0DPA2 414 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 ZFXP17010 805 aaPredicted RBP7.29□□□□□ -1.24
RBBP4-214ENST00000492348 CAPN2P17655 700 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 MAPK1P28482 360 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 GRNP28799 593 aaKnown RBP7.29□□□□□ -1.24
RBBP4-214ENST00000492348 CYP2C18P33260 490 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 ARL4AP40617 200 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 NR2C2P49116 596 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 CCL23P55773 120 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 GPX6P59796 221 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 YWHAGP61981 247 aaKnown RBP eCLIP7.29□□□□□ -1.24
RBBP4-214ENST00000492348 PPP2R2AP63151 447 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 GNGT1P63211 74 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 IFI35P80217 286 aaPredicted RBP7.29□□□□□ -1.24
RBBP4-214ENST00000492348 BASP1P80723 227 aaKnown RBP7.29□□□□□ -1.24
RBBP4-214ENST00000492348 GUCY1A3Q02108 690 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 TLE2Q04725 743 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 IFRD2Q12894 506 aaPredicted RBP7.29□□□□□ -1.24
RBBP4-214ENST00000492348 PDIA2Q13087 525 aaKnown RBP7.29□□□□□ -1.24
RBBP4-214ENST00000492348 PAFAH1B3Q15102 231 aaKnown RBP7.29□□□□□ -1.24
RBBP4-214ENST00000492348 RTP2Q5QGT7 225 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 HP1BP3Q5SSJ5 553 aaPredicted RBP7.29□□□□□ -1.24
RBBP4-214ENST00000492348 FAXCQ5TGI0 409 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 FAM171A1Q5VUB5 890 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 SDHAF4Q5VUM1 108 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 TTC19Q6DKK2 380 aaPredicted RBP7.29□□□□□ -1.24
RBBP4-214ENST00000492348 FUT10Q6P4F1 479 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 KCNT2Q6UVM3 1135 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 RSPO2Q6UXX9 243 aaPredicted RBP7.29□□□□□ -1.24
RBBP4-214ENST00000492348 SLC39A5Q6ZMH5 540 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 CEP128Q6ZU80 1094 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 ZNF534Q76KX8 674 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 PCGF5Q86SE9 256 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 TP53INP2Q8IXH6 220 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 ZBED8Q8IZ13 594 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 ABI1Q8IZP0 508 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 LRRC43Q8N309 656 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 NPWQ8N729 165 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 CCDC110Q8TBZ0 833 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 FUBP3Q96I24 572 aaKnown RBP eCLIP7.29□□□□□ -1.24
RBBP4-214ENST00000492348 C8orf48Q96LL4 319 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 PGLYRP2Q96PD5 576 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 TMEM175Q9BSA9 504 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 VN1R3Q9BXE9 311 aa7.29□□□□□ -1.24
RBBP4-214ENST00000492348 CAPS2Q9BXY5 557 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms