RNA–Protein interactions for RNA: ENST00000491827.1

U2SURP-213, Transcript of U2 snRNP associated SURP domain containing, humanhuman

TSL 3

Gene U2SURP, Length 824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-213ENST00000491827 ADAM10O14672 748 aa4.31□□□□□ -1.72
U2SURP-213ENST00000491827 DSCR3O14972 297 aa4.31□□□□□ -1.72
U2SURP-213ENST00000491827 HOXC11O43248 304 aaPredicted RBP4.31□□□□□ -1.72
U2SURP-213ENST00000491827 HNRNPRO43390 633 aaKnown RBP4.31□□□□□ -1.72
U2SURP-213ENST00000491827 CYP3A4P08684 503 aa4.31□□□□□ -1.72
U2SURP-213ENST00000491827 CNPP09543 421 aaKnown RBP4.31□□□□□ -1.72
U2SURP-213ENST00000491827 TMEM191BP0C7N4 346 aa4.31□□□□□ -1.72
U2SURP-213ENST00000491827 TBC1D3HP0C7X1 549 aa4.31□□□□□ -1.72
U2SURP-213ENST00000491827 CYP2A6P11509 494 aaPredicted RBP4.31□□□□□ -1.72
U2SURP-213ENST00000491827 ALADP13716 330 aa4.31□□□□□ -1.72
U2SURP-213ENST00000491827 XBP1P17861 261 aa4.31□□□□□ -1.72
U2SURP-213ENST00000491827 RXRAP19793 462 aa4.31□□□□□ -1.72
U2SURP-213ENST00000491827 DUSP1P28562 367 aa4.31□□□□□ -1.72
U2SURP-213ENST00000491827 RGS19P49795 217 aa4.31□□□□□ -1.72
U2SURP-213ENST00000491827 RPL15P61313 204 aaKnown RBP4.31□□□□□ -1.72
U2SURP-213ENST00000491827 VAMP2P63027 116 aa4.31□□□□□ -1.72
U2SURP-213ENST00000491827 PSG6Q00889 435 aa4.31□□□□□ -1.72
U2SURP-213ENST00000491827 TLE3Q04726 772 aa4.31□□□□□ -1.72
U2SURP-213ENST00000491827 UBE3AQ05086 875 aa4.31□□□□□ -1.72
U2SURP-213ENST00000491827 LMAN2Q12907 356 aa4.31□□□□□ -1.72
U2SURP-213ENST00000491827 SLC12A1Q13621 1099 aa4.31□□□□□ -1.72
U2SURP-213ENST00000491827 DCTN1Q14203 1278 aa4.31□□□□□ -1.72
U2SURP-213ENST00000491827 TBC1D3GQ6DHY5 549 aa4.31□□□□□ -1.72
U2SURP-213ENST00000491827 TBC1D3CQ6IPX1 549 aa4.31□□□□□ -1.72
U2SURP-213ENST00000491827 WDR93Q6P2C0 686 aa4.31□□□□□ -1.72
U2SURP-213ENST00000491827 SYT13Q7L8C5 426 aa4.31□□□□□ -1.72
U2SURP-213ENST00000491827 CPOQ8IVL8 374 aa4.31□□□□□ -1.72
U2SURP-213ENST00000491827 TBC1D3Q8IZP1 549 aaPredicted RBP4.31□□□□□ -1.72
U2SURP-213ENST00000491827 TERB1Q8NA31 727 aa4.31□□□□□ -1.72
U2SURP-213ENST00000491827 SMRP1Q8NCR6 262 aa4.31□□□□□ -1.72
U2SURP-213ENST00000491827 CEP70Q8NHQ1 597 aa4.31□□□□□ -1.72
U2SURP-213ENST00000491827 SLC2A12Q8TD20 617 aa4.31□□□□□ -1.72
U2SURP-213ENST00000491827 ASB12Q8WXK4 309 aa4.31□□□□□ -1.72
U2SURP-213ENST00000491827 EDC3Q96F86 508 aaKnown RBP4.31□□□□□ -1.72
U2SURP-213ENST00000491827 MAELQ96JY0 434 aaKnown RBP4.31□□□□□ -1.72
U2SURP-213ENST00000491827 PIGSQ96S52 555 aa4.31□□□□□ -1.72
U2SURP-213ENST00000491827 EIF2AK1Q9BQI3 630 aaKnown RBP4.31□□□□□ -1.72
U2SURP-213ENST00000491827 CHODLQ9H9P2 273 aa4.31□□□□□ -1.72
U2SURP-213ENST00000491827 SAP30LQ9HAJ7 183 aa4.31□□□□□ -1.72
U2SURP-213ENST00000491827 USP29Q9HBJ7 922 aa4.31□□□□□ -1.72
U2SURP-213ENST00000491827 WASH6PQ9NQA3 447 aa4.31□□□□□ -1.72
U2SURP-213ENST00000491827 GAR1Q9NY12 217 aaKnown RBP4.31□□□□□ -1.72
U2SURP-213ENST00000491827 TFCP2L1Q9NZI6 479 aa4.31□□□□□ -1.72
U2SURP-213ENST00000491827 FZD4Q9ULV1 537 aa4.31□□□□□ -1.72
U2SURP-213ENST00000491827 CRYL1Q9Y2S2 319 aa4.31□□□□□ -1.72
U2SURP-213ENST00000491827 RRP7AQ9Y3A4 280 aaKnown RBP4.31□□□□□ -1.72
U2SURP-213ENST00000491827 SMARCA2P51531 1590 aa4.31□□□□□ -1.72
U2SURP-213ENST00000491827 FNDC1Q4ZHG4 1894 aaPredicted RBP4.3□□□□□ -1.72
U2SURP-213ENST00000491827 FAM90A10PA6NDY2 464 aa4.3□□□□□ -1.72
U2SURP-213ENST00000491827 C3orf70A6NLC5 250 aaPredicted RBP4.3□□□□□ -1.72
U2SURP-213ENST00000491827 PRR23D1E9PI22 279 aaPredicted RBP4.3□□□□□ -1.72
U2SURP-213ENST00000491827 TSPAN3O60637 253 aa4.3□□□□□ -1.72
U2SURP-213ENST00000491827 POLBP06746 335 aa4.3□□□□□ -1.72
U2SURP-213ENST00000491827 CHRM5P08912 532 aaPredicted RBP4.3□□□□□ -1.72
U2SURP-213ENST00000491827 PRR23D2P0DMB1 279 aaPredicted RBP4.3□□□□□ -1.72
U2SURP-213ENST00000491827 CNTFP26441 200 aa4.3□□□□□ -1.72
U2SURP-213ENST00000491827 GRK5P34947 590 aa4.3□□□□□ -1.72
U2SURP-213ENST00000491827 PCP4P48539 62 aa4.3□□□□□ -1.72
U2SURP-213ENST00000491827 JAK3P52333 1124 aa4.3□□□□□ -1.72
U2SURP-213ENST00000491827 GPC5P78333 572 aa4.3□□□□□ -1.72
U2SURP-213ENST00000491827 CFHR3Q02985 330 aa4.3□□□□□ -1.72
U2SURP-213ENST00000491827 TRPC3Q13507 836 aa4.3□□□□□ -1.72
U2SURP-213ENST00000491827 RBMS2Q15434 407 aaKnown RBP4.3□□□□□ -1.72
U2SURP-213ENST00000491827 CTXN3Q4LDR2 81 aa4.3□□□□□ -1.72
U2SURP-213ENST00000491827 MAP3K21Q5TCX8 1036 aa4.3□□□□□ -1.72
U2SURP-213ENST00000491827 C16orf89Q6UX73 402 aa4.3□□□□□ -1.72
U2SURP-213ENST00000491827 BBS12Q6ZW61 710 aa4.3□□□□□ -1.72
U2SURP-213ENST00000491827 FSIP1Q8NA03 581 aa4.3□□□□□ -1.72
U2SURP-213ENST00000491827 C16orf52Q8NHV5 167 aa4.3□□□□□ -1.72
U2SURP-213ENST00000491827 PRR11Q96HE9 360 aaPredicted RBP4.3□□□□□ -1.72
U2SURP-213ENST00000491827 MPP4Q96JB8 637 aa4.3□□□□□ -1.72
U2SURP-213ENST00000491827 TWNKQ96RR1 684 aa4.3□□□□□ -1.72
U2SURP-213ENST00000491827 RNF26Q9BY78 433 aaPredicted RBP4.3□□□□□ -1.72
U2SURP-213ENST00000491827 CDCP1Q9H5V8 836 aa4.3□□□□□ -1.72
U2SURP-213ENST00000491827 GGA3Q9NZ52 723 aa4.3□□□□□ -1.72
U2SURP-213ENST00000491827 TRPC5Q9UL62 973 aaPredicted RBP4.3□□□□□ -1.72
U2SURP-213ENST00000491827 SLC12A4Q9UP95 1085 aa4.3□□□□□ -1.72
U2SURP-213ENST00000491827 HMGXB3Q12766 1538 aa4.3□□□□□ -1.72
U2SURP-213ENST00000491827 CYP3A7-CYP3A51PA0A087WV96 503 aa4.29□□□□□ -1.72
U2SURP-213ENST00000491827 CCDC196A0A1B0GTZ2 297 aa4.29□□□□□ -1.72
U2SURP-213ENST00000491827 TTC34A8MYJ7 566 aa4.29□□□□□ -1.72
U2SURP-213ENST00000491827 HMGB1P1B2RPK0 211 aaPredicted RBP4.29□□□□□ -1.72
U2SURP-213ENST00000491827 M0QYT0 321 aa4.29□□□□□ -1.72
U2SURP-213ENST00000491827 EYA2O00167 538 aa4.29□□□□□ -1.72
U2SURP-213ENST00000491827 EPB41L2O43491 1005 aaKnown RBP4.29□□□□□ -1.72
U2SURP-213ENST00000491827 CYP3A7P24462 503 aa4.29□□□□□ -1.72
U2SURP-213ENST00000491827 GALNSP34059 522 aa4.29□□□□□ -1.72
U2SURP-213ENST00000491827 FOXL2P58012 376 aa4.29□□□□□ -1.72
U2SURP-213ENST00000491827 FAM3BP58499 235 aaPredicted RBP4.29□□□□□ -1.72
U2SURP-213ENST00000491827 GHRHRQ02643 423 aa4.29□□□□□ -1.72
U2SURP-213ENST00000491827 RNASELQ05823 741 aaKnown RBP4.29□□□□□ -1.72
U2SURP-213ENST00000491827 CHRNDQ07001 517 aa4.29□□□□□ -1.72
U2SURP-213ENST00000491827 RNASE12Q5GAN4 147 aaKnown RBP4.29□□□□□ -1.72
U2SURP-213ENST00000491827 TMTC1Q8IUR5 882 aa4.29□□□□□ -1.72
U2SURP-213ENST00000491827 ESX1Q8N693 406 aa4.29□□□□□ -1.72
U2SURP-213ENST00000491827 LINC01465Q8N7H1 131 aa4.29□□□□□ -1.72
U2SURP-213ENST00000491827 PTGR2Q8N8N7 351 aaPredicted RBP4.29□□□□□ -1.72
U2SURP-213ENST00000491827 KTI12Q96EK9 354 aaPredicted RBP4.29□□□□□ -1.72
U2SURP-213ENST00000491827 SEC62Q99442 399 aaKnown RBP4.29□□□□□ -1.72
U2SURP-213ENST00000491827 NPAS1Q99742 590 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms