RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 FOXJ1Q92949 421 aa15.57■□□□□ 0.08
USP39-217ENST00000491659 NT5C3BQ969T7 300 aa15.57■□□□□ 0.08
USP39-217ENST00000491659 PGAP3Q96FM1 320 aaPredicted RBP15.57■□□□□ 0.08
USP39-217ENST00000491659 TOE1Q96GM8 510 aaKnown RBP15.57■□□□□ 0.08
USP39-217ENST00000491659 C11orf70Q9BRQ4 267 aa15.57■□□□□ 0.08
USP39-217ENST00000491659 NUSAP1Q9BXS6 441 aaKnown RBP15.57■□□□□ 0.08
USP39-217ENST00000491659 TKTL2Q9H0I9 626 aa15.57■□□□□ 0.08
USP39-217ENST00000491659 ITM2CQ9NQX7 267 aa15.57■□□□□ 0.08
USP39-217ENST00000491659 METTL5Q9NRN9 209 aaKnown RBP15.57■□□□□ 0.08
USP39-217ENST00000491659 SEPT11Q9NVA2 429 aaKnown RBP15.57■□□□□ 0.08
USP39-217ENST00000491659 ARHGEF38Q9NXL2 777 aa15.57■□□□□ 0.08
USP39-217ENST00000491659 EVLQ9UI08 416 aaPredicted RBP15.57■□□□□ 0.08
USP39-217ENST00000491659 PILRBQ9UKJ0 227 aa15.57■□□□□ 0.08
USP39-217ENST00000491659 INTS6Q9UL03 887 aaKnown RBP15.57■□□□□ 0.08
USP39-217ENST00000491659 ERVW-1Q9UQF0 538 aa15.57■□□□□ 0.08
USP39-217ENST00000491659 HS3ST4Q9Y661 456 aa15.57■□□□□ 0.08
USP39-217ENST00000491659 DCDC2BA2VCK2 349 aa15.56■□□□□ 0.08
USP39-217ENST00000491659 MEI4A8MW99 385 aa15.56■□□□□ 0.08
USP39-217ENST00000491659 PATE3B3GLJ2 98 aa15.56■□□□□ 0.08
USP39-217ENST00000491659 CCDC172P0C7W6 258 aa15.56■□□□□ 0.08
USP39-217ENST00000491659 PDGFRAP16234 1089 aa15.56■□□□□ 0.08
USP39-217ENST00000491659 TFE3P19532 575 aaPredicted RBP15.56■□□□□ 0.08
USP39-217ENST00000491659 MMP8P22894 467 aa15.56■□□□□ 0.08
USP39-217ENST00000491659 RDXP35241 583 aaKnown RBP15.56■□□□□ 0.08
USP39-217ENST00000491659 GGCXP38435 758 aa15.56■□□□□ 0.08
USP39-217ENST00000491659 KLHL40Q2TBA0 621 aa15.56■□□□□ 0.08
USP39-217ENST00000491659 TTC31Q49AM3 519 aaPredicted RBP15.56■□□□□ 0.08
USP39-217ENST00000491659 SYCP2LQ5T4T6 812 aa15.56■□□□□ 0.08
USP39-217ENST00000491659 ACBD5Q5T8D3 534 aaPredicted RBP15.56■□□□□ 0.08
USP39-217ENST00000491659 PEAR1Q5VY43 1037 aaPredicted RBP15.56■□□□□ 0.08
USP39-217ENST00000491659 ARCQ7LC44 396 aa15.56■□□□□ 0.08
USP39-217ENST00000491659 SLC41A1Q8IVJ1 513 aa15.56■□□□□ 0.08
USP39-217ENST00000491659 RGL4Q8IZJ4 473 aa15.56■□□□□ 0.08
USP39-217ENST00000491659 KDM1BQ8NB78 822 aa15.56■□□□□ 0.08
USP39-217ENST00000491659 CEP76Q8TAP6 659 aa15.56■□□□□ 0.08
USP39-217ENST00000491659 IGSF8Q969P0 613 aa15.56■□□□□ 0.08
USP39-217ENST00000491659 PPP1R9BQ96SB3 815 aa15.56■□□□□ 0.08
USP39-217ENST00000491659 GPR174Q9BXC1 333 aa15.56■□□□□ 0.08
USP39-217ENST00000491659 SIK2Q9H0K1 926 aa15.56■□□□□ 0.08
USP39-217ENST00000491659 PRSS16Q9NQE7 514 aa15.56■□□□□ 0.08
USP39-217ENST00000491659 WSB2Q9NYS7 404 aaPredicted RBP15.56■□□□□ 0.08
USP39-217ENST00000491659 TMEM59LQ9UK28 342 aa15.56■□□□□ 0.08
USP39-217ENST00000491659 CACNA1AO00555 2505 aa15.56■□□□□ 0.08
USP39-217ENST00000491659 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.55■□□□□ 0.08
USP39-217ENST00000491659 SYCE3A1L190 88 aa15.55■□□□□ 0.08
USP39-217ENST00000491659 CLDN11O75508 207 aa15.55■□□□□ 0.08
USP39-217ENST00000491659 ADCY5O95622 1261 aa15.55■□□□□ 0.08
USP39-217ENST00000491659 IGLV3-19P01714 112 aa15.55■□□□□ 0.08
USP39-217ENST00000491659 DNTTP04053 509 aa15.55■□□□□ 0.08
USP39-217ENST00000491659 CFIP05156 583 aa15.55■□□□□ 0.08
USP39-217ENST00000491659 UNGP13051 313 aaPredicted RBP15.55■□□□□ 0.08
USP39-217ENST00000491659 FERP16591 822 aa15.55■□□□□ 0.08
USP39-217ENST00000491659 NNMTP40261 264 aa15.55■□□□□ 0.08
USP39-217ENST00000491659 TPM4P67936 248 aa15.55■□□□□ 0.08
USP39-217ENST00000491659 ECT2LQ008S8 904 aa15.55■□□□□ 0.08
USP39-217ENST00000491659 ZBTB16Q05516 673 aa15.55■□□□□ 0.08
USP39-217ENST00000491659 SULT2A1Q06520 285 aa15.55■□□□□ 0.08
USP39-217ENST00000491659 ZNF177Q13360 481 aaPredicted RBP15.55■□□□□ 0.08
USP39-217ENST00000491659 DUOXA1Q1HG43 343 aa15.55■□□□□ 0.08
USP39-217ENST00000491659 CLEC16AQ2KHT3 1053 aa15.55■□□□□ 0.08
USP39-217ENST00000491659 HNRNPA1L2Q32P51 320 aaKnown RBP15.55■□□□□ 0.08
USP39-217ENST00000491659 WDR45BQ5MNZ6 344 aa15.55■□□□□ 0.08
USP39-217ENST00000491659 ZNF776Q68DI1 518 aaPredicted RBP15.55■□□□□ 0.08
USP39-217ENST00000491659 APCDD1Q8J025 514 aa15.55■□□□□ 0.08
USP39-217ENST00000491659 SLC30A5Q8TAD4 765 aa15.55■□□□□ 0.08
USP39-217ENST00000491659 MYO19Q96H55 970 aa15.55■□□□□ 0.08
USP39-217ENST00000491659 ZNF419Q96HQ0 510 aaPredicted RBP15.55■□□□□ 0.08
USP39-217ENST00000491659 MRGPRX3Q96LB0 322 aa15.55■□□□□ 0.08
USP39-217ENST00000491659 CFAP57Q96MR6 1250 aa15.55■□□□□ 0.08
USP39-217ENST00000491659 NUP58Q9BVL2 599 aa15.55■□□□□ 0.08
USP39-217ENST00000491659 ADAM33Q9BZ11 813 aa15.55■□□□□ 0.08
USP39-217ENST00000491659 TMEM9BQ9NQ34 198 aa15.55■□□□□ 0.08
USP39-217ENST00000491659 TMEM74BQ9NUR3 256 aa15.55■□□□□ 0.08
USP39-217ENST00000491659 SUSD2Q9UGT4 822 aa15.55■□□□□ 0.08
USP39-217ENST00000491659 DCHS1Q96JQ0 3298 aa15.55■□□□□ 0.08
USP39-217ENST00000491659 ADAMTS9Q9P2N4 1935 aa15.55■□□□□ 0.08
USP39-217ENST00000491659 ITIH6Q6UXX5 1313 aa15.54■□□□□ 0.08
USP39-217ENST00000491659 EDDM13A0A1B0GTR0 161 aa15.54■□□□□ 0.08
USP39-217ENST00000491659 TEX33O43247 280 aa15.54■□□□□ 0.08
USP39-217ENST00000491659 RNASEH1O60930 286 aaKnown RBP15.54■□□□□ 0.08
USP39-217ENST00000491659 CALB1P05937 261 aa15.54■□□□□ 0.08
USP39-217ENST00000491659 SDC4P31431 198 aa15.54■□□□□ 0.08
USP39-217ENST00000491659 CTSOP43234 321 aaPredicted RBP15.54■□□□□ 0.08
USP39-217ENST00000491659 IRAK1P51617 712 aa15.54■□□□□ 0.08
USP39-217ENST00000491659 CDH4P55283 916 aa15.54■□□□□ 0.08
USP39-217ENST00000491659 RPS14P62263 151 aaKnown RBP15.54■□□□□ 0.08
USP39-217ENST00000491659 CXorf57Q6NSI4 855 aaKnown RBP15.54■□□□□ 0.08
USP39-217ENST00000491659 TRNP1Q6NT89 227 aa15.54■□□□□ 0.08
USP39-217ENST00000491659 SLC23A3Q6PIS1 610 aa15.54■□□□□ 0.08
USP39-217ENST00000491659 LRRC31Q6UY01 552 aa15.54■□□□□ 0.08
USP39-217ENST00000491659 FAM124AQ86V42 546 aa15.54■□□□□ 0.08
USP39-217ENST00000491659 EMC1Q8N766 993 aa15.54■□□□□ 0.08
USP39-217ENST00000491659 CADM4Q8NFZ8 388 aa15.54■□□□□ 0.08
USP39-217ENST00000491659 FUCA2Q9BTY2 467 aa15.54■□□□□ 0.08
USP39-217ENST00000491659 RTN4Q9NQC3 1192 aaKnown RBP15.54■□□□□ 0.08
USP39-217ENST00000491659 ADAM22Q9P0K1 906 aa15.54■□□□□ 0.08
USP39-217ENST00000491659 SLC25A13Q9UJS0 675 aa15.54■□□□□ 0.08
USP39-217ENST00000491659 DOCK4Q8N1I0 1966 aa15.54■□□□□ 0.08
USP39-217ENST00000491659 PI4KAP42356 2102 aa15.53■□□□□ 0.08
USP39-217ENST00000491659 TARSL2A2RTX5 802 aaKnown RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms