RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 ASPMQ8IZT6 3477 aa19■□□□□ 0.63
SMIM4-205ENST00000491607 CACNA1BQ00975 2339 aa19■□□□□ 0.63
SMIM4-205ENST00000491607 HSF2BPO75031 334 aa18.99■□□□□ 0.63
SMIM4-205ENST00000491607 GLI1P08151 1106 aa18.99■□□□□ 0.63
SMIM4-205ENST00000491607 SLC2A3P11169 496 aa18.99■□□□□ 0.63
SMIM4-205ENST00000491607 CCR1P32246 355 aa18.99■□□□□ 0.63
SMIM4-205ENST00000491607 KRT9P35527 623 aa18.99■□□□□ 0.63
SMIM4-205ENST00000491607 SFSWAPQ12872 951 aaKnown RBP18.99■□□□□ 0.63
SMIM4-205ENST00000491607 CST6Q15828 149 aa18.99■□□□□ 0.63
SMIM4-205ENST00000491607 RABGAP1LQ5R372 815 aa18.99■□□□□ 0.63
SMIM4-205ENST00000491607 OR6B2Q6IFH4 312 aa18.99■□□□□ 0.63
SMIM4-205ENST00000491607 FAM183BPQ6ZVS7 135 aa18.99■□□□□ 0.63
SMIM4-205ENST00000491607 USP30Q70CQ3 517 aa18.99■□□□□ 0.63
SMIM4-205ENST00000491607 CIR1Q86X95 450 aaPredicted RBP18.99■□□□□ 0.63
SMIM4-205ENST00000491607 MMAAQ8IVH4 418 aaKnown RBP18.99■□□□□ 0.63
SMIM4-205ENST00000491607 GATA6Q92908 595 aa18.99■□□□□ 0.63
SMIM4-205ENST00000491607 RPL10LQ96L21 214 aaKnown RBP18.99■□□□□ 0.63
SMIM4-205ENST00000491607 OMDQ99983 421 aa18.99■□□□□ 0.63
SMIM4-205ENST00000491607 DNAJC12Q9UKB3 198 aa18.99■□□□□ 0.63
SMIM4-205ENST00000491607 AJAP1Q9UKB5 411 aaPredicted RBP18.99■□□□□ 0.63
SMIM4-205ENST00000491607 MSRB2Q9Y3D2 182 aa18.99■□□□□ 0.63
SMIM4-205ENST00000491607 FRYQ5TBA9 3013 aa18.98■□□□□ 0.63
SMIM4-205ENST00000491607 EDDM13A0A1B0GTR0 161 aa18.98■□□□□ 0.63
SMIM4-205ENST00000491607 A0A1W2PP55 124 aa18.98■□□□□ 0.63
SMIM4-205ENST00000491607 TARSL2A2RTX5 802 aaKnown RBP18.98■□□□□ 0.63
SMIM4-205ENST00000491607 MID1O15344 667 aa18.98■□□□□ 0.63
SMIM4-205ENST00000491607 RNASEH2AO75792 299 aaKnown RBP18.98■□□□□ 0.63
SMIM4-205ENST00000491607 FTH1P19P0C7X4 201 aa18.98■□□□□ 0.63
SMIM4-205ENST00000491607 PNMA6AP0CW24 399 aaPredicted RBP18.98■□□□□ 0.63
SMIM4-205ENST00000491607 PDGFRAP16234 1089 aa18.98■□□□□ 0.63
SMIM4-205ENST00000491607 CD27P26842 260 aa18.98■□□□□ 0.63
SMIM4-205ENST00000491607 STK19P49842 368 aaPredicted RBP18.98■□□□□ 0.63
SMIM4-205ENST00000491607 NME3Q13232 169 aa18.98■□□□□ 0.63
SMIM4-205ENST00000491607 MAN2A1Q16706 1144 aa18.98■□□□□ 0.63
SMIM4-205ENST00000491607 KIF19Q2TAC6 998 aa18.98■□□□□ 0.63
SMIM4-205ENST00000491607 HSP90AA4PQ58FG1 418 aa18.98■□□□□ 0.63
SMIM4-205ENST00000491607 C9orf64Q5T6V5 341 aa18.98■□□□□ 0.63
SMIM4-205ENST00000491607 LAYNQ6UX15 382 aa18.98■□□□□ 0.63
SMIM4-205ENST00000491607 C11orf57Q6ZUT1 292 aaPredicted RBP18.98■□□□□ 0.63
SMIM4-205ENST00000491607 ADAT2Q7Z6V5 191 aaKnown RBP18.98■□□□□ 0.63
SMIM4-205ENST00000491607 SLC47A2Q86VL8 602 aa18.98■□□□□ 0.63
SMIM4-205ENST00000491607 FAM114A1Q8IWE2 563 aa18.98■□□□□ 0.63
SMIM4-205ENST00000491607 CCAR2Q8N163 923 aaKnown RBP18.98■□□□□ 0.63
SMIM4-205ENST00000491607 PNPLA1Q8N8W4 532 aa18.98■□□□□ 0.63
SMIM4-205ENST00000491607 KDF1Q8NAX2 398 aaPredicted RBP18.98■□□□□ 0.63
SMIM4-205ENST00000491607 SLC2A13Q96QE2 648 aa18.98■□□□□ 0.63
SMIM4-205ENST00000491607 SIX2Q9NPC8 291 aa18.98■□□□□ 0.63
SMIM4-205ENST00000491607 PLCB1Q9NQ66 1216 aa18.98■□□□□ 0.63
SMIM4-205ENST00000491607 ASNSD1Q9NWL6 643 aa18.98■□□□□ 0.63
SMIM4-205ENST00000491607 CHMP5Q9NZZ3 219 aa18.98■□□□□ 0.63
SMIM4-205ENST00000491607 SERGEFQ9UGK8 458 aa18.98■□□□□ 0.63
SMIM4-205ENST00000491607 SLCO3A1Q9UIG8 710 aa18.98■□□□□ 0.63
SMIM4-205ENST00000491607 PCOLCE2Q9UKZ9 415 aa18.98■□□□□ 0.63
SMIM4-205ENST00000491607 SNX11Q9Y5W9 270 aa18.98■□□□□ 0.63
SMIM4-205ENST00000491607 A0A1B0GVM2 712 aa18.97■□□□□ 0.63
SMIM4-205ENST00000491607 TMEM8BA6NDV4 472 aa18.97■□□□□ 0.63
SMIM4-205ENST00000491607 TCAF2A6NFQ2 919 aa18.97■□□□□ 0.63
SMIM4-205ENST00000491607 ERBB2P04626 1255 aa18.97■□□□□ 0.63
SMIM4-205ENST00000491607 ZNF883P0CG24 379 aa18.97■□□□□ 0.63
SMIM4-205ENST00000491607 PRKCSHP14314 528 aaPredicted RBP18.97■□□□□ 0.63
SMIM4-205ENST00000491607 NNMTP40261 264 aa18.97■□□□□ 0.63
SMIM4-205ENST00000491607 GRIA4P48058 902 aa18.97■□□□□ 0.63
SMIM4-205ENST00000491607 PSMD8P48556 350 aa18.97■□□□□ 0.63
SMIM4-205ENST00000491607 SNX16P57768 344 aa18.97■□□□□ 0.63
SMIM4-205ENST00000491607 EIF4EBP2Q13542 120 aaPredicted RBP18.97■□□□□ 0.63
SMIM4-205ENST00000491607 SLC12A1Q13621 1099 aa18.97■□□□□ 0.63
SMIM4-205ENST00000491607 ARID5BQ14865 1188 aa18.97■□□□□ 0.63
SMIM4-205ENST00000491607 TTC39BQ5VTQ0 682 aaPredicted RBP18.97■□□□□ 0.63
SMIM4-205ENST00000491607 KIAA0895LQ68EN5 471 aa18.97■□□□□ 0.63
SMIM4-205ENST00000491607 LRSAM1Q6UWE0 723 aa18.97■□□□□ 0.63
SMIM4-205ENST00000491607 RPRD1AQ96P16 312 aaPredicted RBP18.97■□□□□ 0.63
SMIM4-205ENST00000491607 PRMT1Q99873 361 aaKnown RBP18.97■□□□□ 0.63
SMIM4-205ENST00000491607 NEUROG2Q9H2A3 272 aa18.97■□□□□ 0.63
SMIM4-205ENST00000491607 PDCL3Q9H2J4 239 aa18.97■□□□□ 0.63
SMIM4-205ENST00000491607 CLSTN2Q9H4D0 955 aa18.97■□□□□ 0.63
SMIM4-205ENST00000491607 OSGEPQ9NPF4 335 aa18.97■□□□□ 0.63
SMIM4-205ENST00000491607 ANKRD6Q9Y2G4 727 aa18.97■□□□□ 0.63
SMIM4-205ENST00000491607 USP24Q9UPU5 2620 aa18.97■□□□□ 0.63
SMIM4-205ENST00000491607 ITIH6Q6UXX5 1313 aa18.97■□□□□ 0.63
SMIM4-205ENST00000491607 CEP295Q9C0D2 2601 aa18.96■□□□□ 0.63
SMIM4-205ENST00000491607 FOXN3O00409 490 aaPredicted RBP18.96■□□□□ 0.63
SMIM4-205ENST00000491607 PES1O00541 588 aaKnown RBP18.96■□□□□ 0.63
SMIM4-205ENST00000491607 IGHV4-34P06331 123 aa18.96■□□□□ 0.63
SMIM4-205ENST00000491607 MZF1P28698 734 aaPredicted RBP18.96■□□□□ 0.63
SMIM4-205ENST00000491607 SLC8A1P32418 973 aa18.96■□□□□ 0.63
SMIM4-205ENST00000491607 GALCP54803 685 aa18.96■□□□□ 0.63
SMIM4-205ENST00000491607 CENPCQ03188 943 aa18.96■□□□□ 0.63
SMIM4-205ENST00000491607 DPCR1Q3MIW9 517 aa18.96■□□□□ 0.63
SMIM4-205ENST00000491607 VWA3BQ502W6 1294 aa18.96■□□□□ 0.63
SMIM4-205ENST00000491607 FBXL22Q6P050 247 aa18.96■□□□□ 0.63
SMIM4-205ENST00000491607 NCEH1Q6PIU2 408 aa18.96■□□□□ 0.63
SMIM4-205ENST00000491607 OLFML1Q6UWY5 402 aa18.96■□□□□ 0.63
SMIM4-205ENST00000491607 RAB44Q7Z6P3 723 aaPredicted RBP18.96■□□□□ 0.63
SMIM4-205ENST00000491607 STK40Q8N2I9 435 aa18.96■□□□□ 0.63
SMIM4-205ENST00000491607 RHBDD1Q8TEB9 315 aa18.96■□□□□ 0.63
SMIM4-205ENST00000491607 ZCCHC14Q8WYQ9 949 aaKnown RBP18.96■□□□□ 0.63
SMIM4-205ENST00000491607 NDST4Q9H3R1 872 aa18.96■□□□□ 0.63
SMIM4-205ENST00000491607 VANGL2Q9ULK5 521 aa18.96■□□□□ 0.63
SMIM4-205ENST00000491607 APOBEC2Q9Y235 224 aaKnown RBP18.96■□□□□ 0.63
SMIM4-205ENST00000491607 LRRC72A6NJI9 287 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms