RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 SIX2Q9NPC8 291 aa17.1■□□□□ 0.33
PDLIM2-217ENST00000491330 PLCB1Q9NQ66 1216 aa17.1■□□□□ 0.33
PDLIM2-217ENST00000491330 SAMSN1Q9NSI8 373 aaKnown RBP17.1■□□□□ 0.33
PDLIM2-217ENST00000491330 ERVW-1Q9UQF0 538 aa17.1■□□□□ 0.33
PDLIM2-217ENST00000491330 SEMA4FO95754 770 aa17.09■□□□□ 0.33
PDLIM2-217ENST00000491330 IGLV3-25P01717 112 aa17.09■□□□□ 0.33
PDLIM2-217ENST00000491330 MAOBP27338 520 aa17.09■□□□□ 0.33
PDLIM2-217ENST00000491330 AFF3P51826 1226 aaKnown RBP17.09■□□□□ 0.33
PDLIM2-217ENST00000491330 RPS14P62263 151 aaKnown RBP17.09■□□□□ 0.33
PDLIM2-217ENST00000491330 KRT83P78385 493 aa17.09■□□□□ 0.33
PDLIM2-217ENST00000491330 APBA1Q02410 837 aa17.09■□□□□ 0.33
PDLIM2-217ENST00000491330 TAF5Q15542 800 aa17.09■□□□□ 0.33
PDLIM2-217ENST00000491330 PTPRNQ16849 979 aa17.09■□□□□ 0.33
PDLIM2-217ENST00000491330 FAM46CQ5VWP2 391 aa17.09■□□□□ 0.33
PDLIM2-217ENST00000491330 OLFML1Q6UWY5 402 aa17.09■□□□□ 0.33
PDLIM2-217ENST00000491330 ADAT2Q7Z6V5 191 aaKnown RBP17.09■□□□□ 0.33
PDLIM2-217ENST00000491330 WDTC1Q8N5D0 677 aa17.09■□□□□ 0.33
PDLIM2-217ENST00000491330 ZNF366Q8N895 744 aa17.09■□□□□ 0.33
PDLIM2-217ENST00000491330 P2RY11Q96G91 374 aa17.09■□□□□ 0.33
PDLIM2-217ENST00000491330 PRICKLE1Q96MT3 831 aaPredicted RBP17.09■□□□□ 0.33
PDLIM2-217ENST00000491330 BPIFA3Q9BQP9 254 aa17.09■□□□□ 0.33
PDLIM2-217ENST00000491330 VPS16Q9H269 839 aa17.09■□□□□ 0.33
PDLIM2-217ENST00000491330 TAB2Q9NYJ8 693 aa17.09■□□□□ 0.33
PDLIM2-217ENST00000491330 CACNA1AO00555 2505 aa17.08■□□□□ 0.33
PDLIM2-217ENST00000491330 LRRC10BA6NIK2 292 aa17.08■□□□□ 0.32
PDLIM2-217ENST00000491330 TRIM16O95361 564 aa17.08■□□□□ 0.32
PDLIM2-217ENST00000491330 ADH1BP00325 375 aa17.08■□□□□ 0.32
PDLIM2-217ENST00000491330 ERBB2P04626 1255 aa17.08■□□□□ 0.32
PDLIM2-217ENST00000491330 ZNF18P17022 549 aa17.08■□□□□ 0.32
PDLIM2-217ENST00000491330 STAT1P42224 750 aa17.08■□□□□ 0.32
PDLIM2-217ENST00000491330 SULT1E1P49888 294 aa17.08■□□□□ 0.32
PDLIM2-217ENST00000491330 ARID5BQ14865 1188 aa17.08■□□□□ 0.32
PDLIM2-217ENST00000491330 ARL13BQ3SXY8 428 aa17.08■□□□□ 0.32
PDLIM2-217ENST00000491330 ACCSLQ4AC99 568 aa17.08■□□□□ 0.32
PDLIM2-217ENST00000491330 TAF3Q5VWG9 929 aa17.08■□□□□ 0.32
PDLIM2-217ENST00000491330 DHX40Q8IX18 779 aaKnown RBP17.08■□□□□ 0.32
PDLIM2-217ENST00000491330 CCAR2Q8N163 923 aaKnown RBP17.08■□□□□ 0.32
PDLIM2-217ENST00000491330 ZCCHC9Q8N567 271 aaKnown RBP17.08■□□□□ 0.32
PDLIM2-217ENST00000491330 NEK11Q8NG66 645 aa17.08■□□□□ 0.32
PDLIM2-217ENST00000491330 SIK2Q9H0K1 926 aa17.08■□□□□ 0.32
PDLIM2-217ENST00000491330 RSPH9Q9H1X1 276 aaPredicted RBP17.08■□□□□ 0.32
PDLIM2-217ENST00000491330 FBXL12Q9NXK8 326 aa17.08■□□□□ 0.32
PDLIM2-217ENST00000491330 EIF2B4Q9UI10 523 aaKnown RBP17.08■□□□□ 0.32
PDLIM2-217ENST00000491330 FHOD1Q9Y613 1164 aa17.08■□□□□ 0.32
PDLIM2-217ENST00000491330 DMDP11532 3685 aa17.08■□□□□ 0.32
PDLIM2-217ENST00000491330 THADAQ6YHU6 1953 aa17.08■□□□□ 0.32
PDLIM2-217ENST00000491330 ANKRD62A6NC57 917 aa17.07■□□□□ 0.32
PDLIM2-217ENST00000491330 SMTNL1A8MU46 457 aa17.07■□□□□ 0.32
PDLIM2-217ENST00000491330 F8VZ95 297 aa17.07■□□□□ 0.32
PDLIM2-217ENST00000491330 RNASEH2AO75792 299 aaKnown RBP17.07■□□□□ 0.32
PDLIM2-217ENST00000491330 FSBPO95073 299 aa17.07■□□□□ 0.32
PDLIM2-217ENST00000491330 PDGFRAP16234 1089 aa17.07■□□□□ 0.32
PDLIM2-217ENST00000491330 CDH4P55283 916 aa17.07■□□□□ 0.32
PDLIM2-217ENST00000491330 AUHQ13825 339 aaKnown RBP17.07■□□□□ 0.32
PDLIM2-217ENST00000491330 ELAVL3Q14576 367 aaKnown RBP17.07■□□□□ 0.32
PDLIM2-217ENST00000491330 CST6Q15828 149 aa17.07■□□□□ 0.32
PDLIM2-217ENST00000491330 KLHL40Q2TBA0 621 aa17.07■□□□□ 0.32
PDLIM2-217ENST00000491330 SLC25A52Q3SY17 297 aa17.07■□□□□ 0.32
PDLIM2-217ENST00000491330 PTPN20Q4JDL3 420 aa17.07■□□□□ 0.32
PDLIM2-217ENST00000491330 SLC45A4Q5BKX6 768 aa17.07■□□□□ 0.32
PDLIM2-217ENST00000491330 FBXL22Q6P050 247 aa17.07■□□□□ 0.32
PDLIM2-217ENST00000491330 TRIM72Q6ZMU5 477 aa17.07■□□□□ 0.32
PDLIM2-217ENST00000491330 DEFB124Q8NES8 71 aa17.07■□□□□ 0.32
PDLIM2-217ENST00000491330 WFDC5Q8TCV5 224 aa17.07■□□□□ 0.32
PDLIM2-217ENST00000491330 OR8D1Q8WZ84 308 aa17.07■□□□□ 0.32
PDLIM2-217ENST00000491330 C2orf49Q9BVC5 232 aaPredicted RBP17.07■□□□□ 0.32
PDLIM2-217ENST00000491330 MUC3BQ9H195 1237 aa17.07■□□□□ 0.32
PDLIM2-217ENST00000491330 PABPC3Q9H361 631 aaKnown RBP17.07■□□□□ 0.32
PDLIM2-217ENST00000491330 DNAAF2Q9NVR5 837 aaKnown RBP17.07■□□□□ 0.32
PDLIM2-217ENST00000491330 VPS28Q9UK41 221 aa17.07■□□□□ 0.32
PDLIM2-217ENST00000491330 VANGL2Q9ULK5 521 aa17.07■□□□□ 0.32
PDLIM2-217ENST00000491330 FAM47DPA6NHR8 397 aa17.06■□□□□ 0.32
PDLIM2-217ENST00000491330 DFNA5O60443 496 aa17.06■□□□□ 0.32
PDLIM2-217ENST00000491330 SIN3BO75182 1162 aa17.06■□□□□ 0.32
PDLIM2-217ENST00000491330 C5AR1P21730 350 aa17.06■□□□□ 0.32
PDLIM2-217ENST00000491330 PMLP29590 882 aa17.06■□□□□ 0.32
PDLIM2-217ENST00000491330 SLC8A1P32418 973 aa17.06■□□□□ 0.32
PDLIM2-217ENST00000491330 CDH5P33151 784 aaPredicted RBP17.06■□□□□ 0.32
PDLIM2-217ENST00000491330 GABRB2P47870 512 aa17.06■□□□□ 0.32
PDLIM2-217ENST00000491330 PLK1P53350 603 aa17.06■□□□□ 0.32
PDLIM2-217ENST00000491330 C21orf59P57076 290 aa17.06■□□□□ 0.32
PDLIM2-217ENST00000491330 POLR2FP61218 127 aaKnown RBP17.06■□□□□ 0.32
PDLIM2-217ENST00000491330 SHC2P98077 582 aa17.06■□□□□ 0.32
PDLIM2-217ENST00000491330 SEMA3BQ13214 749 aa17.06■□□□□ 0.32
PDLIM2-217ENST00000491330 FSCBQ5H9T9 825 aa17.06■□□□□ 0.32
PDLIM2-217ENST00000491330 C6orf118Q5T5N4 469 aa17.06■□□□□ 0.32
PDLIM2-217ENST00000491330 CNTNAP3BQ96NU0 1288 aa17.06■□□□□ 0.32
PDLIM2-217ENST00000491330 CNTNAP3Q9BZ76 1288 aa17.06■□□□□ 0.32
PDLIM2-217ENST00000491330 TKTL2Q9H0I9 626 aa17.06■□□□□ 0.32
PDLIM2-217ENST00000491330 OSGEPQ9NPF4 335 aa17.06■□□□□ 0.32
PDLIM2-217ENST00000491330 FAM207AQ9NSI2 230 aaPredicted RBP17.06■□□□□ 0.32
PDLIM2-217ENST00000491330 LIMA1Q9UHB6 759 aaKnown RBP17.06■□□□□ 0.32
PDLIM2-217ENST00000491330 XPO7Q9UIA9 1087 aaKnown RBP17.06■□□□□ 0.32
PDLIM2-217ENST00000491330 FZD4Q9ULV1 537 aa17.06■□□□□ 0.32
PDLIM2-217ENST00000491330 ABCA7Q8IZY2 2146 aa17.06■□□□□ 0.32
PDLIM2-217ENST00000491330 C1QTNF3-AMACRE9PGA6 284 aa17.05■□□□□ 0.32
PDLIM2-217ENST00000491330 GOLGA8SH3BPF8 625 aa17.05■□□□□ 0.32
PDLIM2-217ENST00000491330 PAGE1O75459 146 aa17.05■□□□□ 0.32
PDLIM2-217ENST00000491330 IL1BP01584 269 aa17.05■□□□□ 0.32
PDLIM2-217ENST00000491330 CD27P26842 260 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms