RNA–Protein interactions for RNA: ENST00000491294.1

ARPC1B-220, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 1,051 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-220ENST00000491294 GTPBP2Q9BX10 602 aaKnown RBP18.33■□□□□ 0.52
ARPC1B-220ENST00000491294 GANQ9H2C0 597 aa18.33■□□□□ 0.52
ARPC1B-220ENST00000491294 FANCLQ9NW38 375 aa18.33■□□□□ 0.52
ARPC1B-220ENST00000491294 TMEM51Q9NW97 253 aa18.33■□□□□ 0.52
ARPC1B-220ENST00000491294 STAP1Q9ULZ2 295 aa18.33■□□□□ 0.52
ARPC1B-220ENST00000491294 A0A1B0GTW7 788 aa18.32■□□□□ 0.52
ARPC1B-220ENST00000491294 TARSL2A2RTX5 802 aaKnown RBP18.32■□□□□ 0.52
ARPC1B-220ENST00000491294 SIN3BO75182 1162 aa18.32■□□□□ 0.52
ARPC1B-220ENST00000491294 CEACAM1P13688 526 aa18.32■□□□□ 0.52
ARPC1B-220ENST00000491294 CTSOP43234 321 aaPredicted RBP18.32■□□□□ 0.52
ARPC1B-220ENST00000491294 SULT2A1Q06520 285 aa18.32■□□□□ 0.52
ARPC1B-220ENST00000491294 AUHQ13825 339 aaKnown RBP18.32■□□□□ 0.52
ARPC1B-220ENST00000491294 RNF219Q5W0B1 726 aaPredicted RBP18.32■□□□□ 0.52
ARPC1B-220ENST00000491294 ZNF677Q86XU0 584 aa18.32■□□□□ 0.52
ARPC1B-220ENST00000491294 XYLT1Q86Y38 959 aa18.32■□□□□ 0.52
ARPC1B-220ENST00000491294 APCDD1Q8J025 514 aa18.32■□□□□ 0.52
ARPC1B-220ENST00000491294 ANKRD20A12PQ8NF67 263 aa18.32■□□□□ 0.52
ARPC1B-220ENST00000491294 RPRD1AQ96P16 312 aaPredicted RBP18.32■□□□□ 0.52
ARPC1B-220ENST00000491294 PPP1R9BQ96SB3 815 aa18.32■□□□□ 0.52
ARPC1B-220ENST00000491294 BTBD1Q9H0C5 482 aa18.32■□□□□ 0.52
ARPC1B-220ENST00000491294 RSPH9Q9H1X1 276 aaPredicted RBP18.32■□□□□ 0.52
ARPC1B-220ENST00000491294 MTG2Q9H4K7 406 aa18.32■□□□□ 0.52
ARPC1B-220ENST00000491294 SCML1Q9UN30 329 aa18.32■□□□□ 0.52
ARPC1B-220ENST00000491294 DAAM1Q9Y4D1 1078 aa18.32■□□□□ 0.52
ARPC1B-220ENST00000491294 CACNA1EQ15878 2313 aa18.31■□□□□ 0.52
ARPC1B-220ENST00000491294 GIPC1O14908 333 aa18.31■□□□□ 0.52
ARPC1B-220ENST00000491294 OPHN1O60890 802 aa18.31■□□□□ 0.52
ARPC1B-220ENST00000491294 RNASEH1O60930 286 aaKnown RBP18.31■□□□□ 0.52
ARPC1B-220ENST00000491294 PAGE1O75459 146 aa18.31■□□□□ 0.52
ARPC1B-220ENST00000491294 MBD3O95983 291 aa18.31■□□□□ 0.52
ARPC1B-220ENST00000491294 F9P00740 461 aa18.31■□□□□ 0.52
ARPC1B-220ENST00000491294 PDGFRAP16234 1089 aa18.31■□□□□ 0.52
ARPC1B-220ENST00000491294 PMLP29590 882 aa18.31■□□□□ 0.52
ARPC1B-220ENST00000491294 ACSL1P33121 698 aa18.31■□□□□ 0.52
ARPC1B-220ENST00000491294 CXCR3P49682 368 aa18.31■□□□□ 0.52
ARPC1B-220ENST00000491294 KLK7P49862 253 aa18.31■□□□□ 0.52
ARPC1B-220ENST00000491294 SULT1E1P49888 294 aa18.31■□□□□ 0.52
ARPC1B-220ENST00000491294 PLK1P53350 603 aa18.31■□□□□ 0.52
ARPC1B-220ENST00000491294 POLR2FP61218 127 aaKnown RBP18.31■□□□□ 0.52
ARPC1B-220ENST00000491294 SFSWAPQ12872 951 aaKnown RBP18.31■□□□□ 0.52
ARPC1B-220ENST00000491294 STX1AQ16623 288 aa18.31■□□□□ 0.52
ARPC1B-220ENST00000491294 BRMS1LQ5PSV4 323 aa18.31■□□□□ 0.52
ARPC1B-220ENST00000491294 FAM102AQ5T9C2 384 aaPredicted RBP18.31■□□□□ 0.52
ARPC1B-220ENST00000491294 OTUD1Q5VV17 481 aaPredicted RBP18.31■□□□□ 0.52
ARPC1B-220ENST00000491294 SND1Q7KZF4 910 aaKnown RBP eCLIP18.31■□□□□ 0.52
ARPC1B-220ENST00000491294 CIR1Q86X95 450 aaPredicted RBP18.31■□□□□ 0.52
ARPC1B-220ENST00000491294 DHX40Q8IX18 779 aaKnown RBP18.31■□□□□ 0.52
ARPC1B-220ENST00000491294 MINDY1Q8N5J2 469 aa18.31■□□□□ 0.52
ARPC1B-220ENST00000491294 EPS8L1Q8TE68 723 aa18.31■□□□□ 0.52
ARPC1B-220ENST00000491294 IGSF8Q969P0 613 aa18.31■□□□□ 0.52
ARPC1B-220ENST00000491294 NT5C3BQ969T7 300 aa18.31■□□□□ 0.52
ARPC1B-220ENST00000491294 PGAP3Q96FM1 320 aaPredicted RBP18.31■□□□□ 0.52
ARPC1B-220ENST00000491294 MIR1-1HGQ9H1L0 117 aa18.31■□□□□ 0.52
ARPC1B-220ENST00000491294 WDCPQ9H6R7 721 aa18.31■□□□□ 0.52
ARPC1B-220ENST00000491294 ARHGEF38Q9NXL2 777 aa18.31■□□□□ 0.52
ARPC1B-220ENST00000491294 SLCO3A1Q9UIG8 710 aa18.31■□□□□ 0.52
ARPC1B-220ENST00000491294 VANGL2Q9ULK5 521 aa18.31■□□□□ 0.52
ARPC1B-220ENST00000491294 HS3ST4Q9Y661 456 aa18.31■□□□□ 0.52
ARPC1B-220ENST00000491294 ITIH6Q6UXX5 1313 aa18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 EDDM13A0A1B0GTR0 161 aa18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 TTC34A8MYJ7 566 aa18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 UPK3BL1B0FP48 263 aa18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 UPK3BL2E5RIL1 263 aa18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 GFPT2O94808 682 aa18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 MMEP08473 750 aa18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 MZF1P28698 734 aaPredicted RBP18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 NNMTP40261 264 aa18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 COPB1P53618 953 aaKnown RBP18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 NOMO3P69849 1222 aa18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 MYL5Q02045 173 aa18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 SEMA3BQ13214 749 aa18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 ZNF177Q13360 481 aaPredicted RBP18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 C5orf22Q49AR2 442 aa18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 C9orf64Q5T6V5 341 aa18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 CXorf57Q6NSI4 855 aaKnown RBP18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 USP30Q70CQ3 517 aa18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 ZCCHC9Q8N567 271 aaKnown RBP18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 DEFB124Q8NES8 71 aa18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 CPA5Q8WXQ8 436 aa18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 ADAM33Q9BZ11 813 aa18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 ZDHHC5Q9C0B5 715 aa18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 TKTL2Q9H0I9 626 aa18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 SIK2Q9H0K1 926 aa18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 SLC32A1Q9H598 525 aa18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 C6orf106Q9H6K1 298 aaPredicted RBP18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 SGK2Q9HBY8 427 aa18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 FAM207AQ9NSI2 230 aaPredicted RBP18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 PIGVQ9NUD9 493 aa18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 DNAAF2Q9NVR5 837 aaKnown RBP18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 LIMA1Q9UHB6 759 aaKnown RBP18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 EIF2B4Q9UI10 523 aaKnown RBP18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 NCKAP1Q9Y2A7 1128 aa18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 PAXBP1Q9Y5B6 917 aa18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 LAMA1P25391 3075 aa18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 PCDH15Q96QU1 1955 aa18.3■□□□□ 0.52
ARPC1B-220ENST00000491294 NUMA1Q14980 2115 aa18.29■□□□□ 0.52
ARPC1B-220ENST00000491294 BCAT2O15382 392 aaPredicted RBP18.29■□□□□ 0.52
ARPC1B-220ENST00000491294 CLDN11O75508 207 aa18.29■□□□□ 0.52
ARPC1B-220ENST00000491294 ADCY5O95622 1261 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms