RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 DNTTIP2Q5QJE6 756 aaKnown RBP4.47□□□□□ -1.69
PHC3-213ENST00000491258 ARMC9Q7Z3E5 817 aa4.47□□□□□ -1.69
PHC3-213ENST00000491258 KDELC2Q7Z4H8 507 aa4.47□□□□□ -1.69
PHC3-213ENST00000491258 CCDC28AQ8IWP9 274 aa4.47□□□□□ -1.69
PHC3-213ENST00000491258 CCDC150Q8NCX0 1101 aa4.47□□□□□ -1.69
PHC3-213ENST00000491258 SRFBP1Q8NEF9 429 aaKnown RBP4.47□□□□□ -1.69
PHC3-213ENST00000491258 ADAMTS14Q8WXS8 1223 aa4.47□□□□□ -1.69
PHC3-213ENST00000491258 RETREG1Q9H6L5 497 aa4.47□□□□□ -1.69
PHC3-213ENST00000491258 FBXO28Q9NVF7 368 aa4.47□□□□□ -1.69
PHC3-213ENST00000491258 KIF21AQ7Z4S6 1674 aa4.46□□□□□ -1.7
PHC3-213ENST00000491258 ZBTB11O95625 1053 aaPredicted RBP4.46□□□□□ -1.7
PHC3-213ENST00000491258 GLUD1P00367 558 aa4.46□□□□□ -1.7
PHC3-213ENST00000491258 CGAP01215 116 aa4.46□□□□□ -1.7
PHC3-213ENST00000491258 FCGR1AP12314 374 aa4.46□□□□□ -1.7
PHC3-213ENST00000491258 RPL17P18621 184 aaKnown RBP4.46□□□□□ -1.7
PHC3-213ENST00000491258 GLUD2P49448 558 aa4.46□□□□□ -1.7
PHC3-213ENST00000491258 ATP1A4Q13733 1029 aa4.46□□□□□ -1.7
PHC3-213ENST00000491258 GALNT3Q14435 633 aa4.46□□□□□ -1.7
PHC3-213ENST00000491258 ZNF718Q3SXZ3 478 aa4.46□□□□□ -1.7
PHC3-213ENST00000491258 ALG10Q5BKT4 473 aa4.46□□□□□ -1.7
PHC3-213ENST00000491258 ALG10BQ5I7T1 473 aa4.46□□□□□ -1.7
PHC3-213ENST00000491258 DCAF12L2Q5VW00 463 aa4.46□□□□□ -1.7
PHC3-213ENST00000491258 UNKQ9C0B0 810 aaKnown RBP4.46□□□□□ -1.7
PHC3-213ENST00000491258 BTBD1Q9H0C5 482 aa4.46□□□□□ -1.7
PHC3-213ENST00000491258 PNPLA8Q9NP80 782 aa4.46□□□□□ -1.7
PHC3-213ENST00000491258 CORO2BQ9UQ03 480 aa4.46□□□□□ -1.7
PHC3-213ENST00000491258 PCDHGB6Q9Y5F9 930 aa4.46□□□□□ -1.7
PHC3-213ENST00000491258 PLSCR5A0PG75 271 aa4.45□□□□□ -1.7
PHC3-213ENST00000491258 MSI1O43347 362 aaKnown RBP4.45□□□□□ -1.7
PHC3-213ENST00000491258 NEURL1O76050 574 aa4.45□□□□□ -1.7
PHC3-213ENST00000491258 HRGP04196 525 aa4.45□□□□□ -1.7
PHC3-213ENST00000491258 SHC2P98077 582 aa4.45□□□□□ -1.7
PHC3-213ENST00000491258 EEF1A2Q05639 463 aaKnown RBP4.45□□□□□ -1.7
PHC3-213ENST00000491258 KIF5AQ12840 1032 aa4.45□□□□□ -1.7
PHC3-213ENST00000491258 DAG1Q14118 895 aa4.45□□□□□ -1.7
PHC3-213ENST00000491258 ARHGAP15Q53QZ3 475 aa4.45□□□□□ -1.7
PHC3-213ENST00000491258 RAVER1Q8IY67 606 aaKnown RBP4.45□□□□□ -1.7
PHC3-213ENST00000491258 ENGASEQ8NFI3 743 aa4.45□□□□□ -1.7
PHC3-213ENST00000491258 INPP4AQ96PE3 977 aaPredicted RBP4.45□□□□□ -1.7
PHC3-213ENST00000491258 APOL5Q9BWW9 433 aa4.45□□□□□ -1.7
PHC3-213ENST00000491258 C1QTNF4Q9BXJ3 329 aa4.45□□□□□ -1.7
PHC3-213ENST00000491258 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.45□□□□□ -1.7
PHC3-213ENST00000491258 MAGEB5Q9BZ81 275 aa4.45□□□□□ -1.7
PHC3-213ENST00000491258 CATSPERBQ9H7T0 1116 aa4.45□□□□□ -1.7
PHC3-213ENST00000491258 ZMYND8Q9ULU4 1186 aaPredicted RBP4.45□□□□□ -1.7
PHC3-213ENST00000491258 TNFSF13BQ9Y275 285 aa4.45□□□□□ -1.7
PHC3-213ENST00000491258 PCDHB7Q9Y5E2 793 aa4.45□□□□□ -1.7
PHC3-213ENST00000491258 ARHGEF11O15085 1522 aa4.45□□□□□ -1.7
PHC3-213ENST00000491258 WRNQ14191 1432 aaPredicted RBP eCLIP4.45□□□□□ -1.7
PHC3-213ENST00000491258 DNMBPQ6XZF7 1577 aa4.44□□□□□ -1.7
PHC3-213ENST00000491258 GRIN2BQ13224 1484 aa4.44□□□□□ -1.7
PHC3-213ENST00000491258 FGD5Q6ZNL6 1462 aa4.44□□□□□ -1.7
PHC3-213ENST00000491258 A0A0B4J293 547 aa4.44□□□□□ -1.7
PHC3-213ENST00000491258 SRRM3A6NNA2 597 aaPredicted RBP4.44□□□□□ -1.7
PHC3-213ENST00000491258 AREL1O15033 823 aa4.44□□□□□ -1.7
PHC3-213ENST00000491258 SCGB1D2O95969 90 aa4.44□□□□□ -1.7
PHC3-213ENST00000491258 POLE2P56282 527 aa4.44□□□□□ -1.7
PHC3-213ENST00000491258 SELENOVP59797 346 aa4.44□□□□□ -1.7
PHC3-213ENST00000491258 KRTAP24-1Q3LI83 254 aa4.44□□□□□ -1.7
PHC3-213ENST00000491258 C10orf76Q5T2E6 689 aa4.44□□□□□ -1.7
PHC3-213ENST00000491258 RAP1GAP2Q684P5 730 aa4.44□□□□□ -1.7
PHC3-213ENST00000491258 WDR93Q6P2C0 686 aa4.44□□□□□ -1.7
PHC3-213ENST00000491258 USP17L6PQ6QN14 398 aa4.44□□□□□ -1.7
PHC3-213ENST00000491258 MAGEB6Q8N7X4 407 aa4.44□□□□□ -1.7
PHC3-213ENST00000491258 NPIPB3Q92617 1050 aa4.44□□□□□ -1.7
PHC3-213ENST00000491258 RTP4Q96DX8 246 aa4.44□□□□□ -1.7
PHC3-213ENST00000491258 DOCK7Q96N67 2140 aa4.44□□□□□ -1.7
PHC3-213ENST00000491258 POLDIP3Q9BY77 421 aaKnown RBP4.44□□□□□ -1.7
PHC3-213ENST00000491258 PCDHAC1Q9H158 963 aa4.44□□□□□ -1.7
PHC3-213ENST00000491258 SNAPC4Q5SXM2 1469 aa4.43□□□□□ -1.7
PHC3-213ENST00000491258 ARAP1Q96P48 1450 aa4.43□□□□□ -1.7
PHC3-213ENST00000491258 CUX1P39880 1505 aa4.43□□□□□ -1.7
PHC3-213ENST00000491258 CLCA1A8K7I4 914 aa4.43□□□□□ -1.7
PHC3-213ENST00000491258 I6L893 689 aaPredicted RBP4.43□□□□□ -1.7
PHC3-213ENST00000491258 NPC1O15118 1278 aa4.43□□□□□ -1.7
PHC3-213ENST00000491258 KCNQ3O43525 872 aa4.43□□□□□ -1.7
PHC3-213ENST00000491258 LIASO43766 372 aa4.43□□□□□ -1.7
PHC3-213ENST00000491258 VIPP01282 170 aa4.43□□□□□ -1.7
PHC3-213ENST00000491258 MYL4P12829 197 aa4.43□□□□□ -1.7
PHC3-213ENST00000491258 PMS2P54278 862 aa4.43□□□□□ -1.7
PHC3-213ENST00000491258 ZP1P60852 638 aa4.43□□□□□ -1.7
PHC3-213ENST00000491258 GRM3Q14832 879 aa4.43□□□□□ -1.7
PHC3-213ENST00000491258 ZNF672Q499Z4 452 aaPredicted RBP4.43□□□□□ -1.7
PHC3-213ENST00000491258 FSCBQ5H9T9 825 aa4.43□□□□□ -1.7
PHC3-213ENST00000491258 KLHDC7AQ5VTJ3 777 aa4.43□□□□□ -1.7
PHC3-213ENST00000491258 KIAA0408Q6ZU52 694 aa4.43□□□□□ -1.7
PHC3-213ENST00000491258 H1FNTQ75WM6 255 aaPredicted RBP4.43□□□□□ -1.7
PHC3-213ENST00000491258 CHST15Q7LFX5 561 aaPredicted RBP4.43□□□□□ -1.7
PHC3-213ENST00000491258 CAMK1DQ8IU85 385 aa4.43□□□□□ -1.7
PHC3-213ENST00000491258 FAM217AQ8IXS0 508 aa4.43□□□□□ -1.7
PHC3-213ENST00000491258 ADGRF3Q8IZF5 1079 aa4.43□□□□□ -1.7
PHC3-213ENST00000491258 SLC25A41Q8N5S1 370 aa4.43□□□□□ -1.7
PHC3-213ENST00000491258 ADPRHL1Q8NDY3 354 aa4.43□□□□□ -1.7
PHC3-213ENST00000491258 ADAD1Q96M93 576 aaKnown RBP4.43□□□□□ -1.7
PHC3-213ENST00000491258 WDR77Q9BQA1 342 aaPredicted RBP4.43□□□□□ -1.7
PHC3-213ENST00000491258 IL21RQ9HBE5 538 aa4.43□□□□□ -1.7
PHC3-213ENST00000491258 PNRC2Q9NPJ4 139 aaKnown RBP4.43□□□□□ -1.7
PHC3-213ENST00000491258 MAGED2Q9UNF1 606 aaPredicted RBP4.43□□□□□ -1.7
PHC3-213ENST00000491258 DTX4Q9Y2E6 619 aa4.43□□□□□ -1.7
PHC3-213ENST00000491258 UBE2J1Q9Y385 318 aaPredicted RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms