RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 ARHGEF18Q6ZSZ5 1173 aa14.3□□□□□ -0.12
SMPD4-219ENST00000491128 GAREM2Q75VX8 874 aa14.3□□□□□ -0.12
SMPD4-219ENST00000491128 PID1Q7Z2X4 250 aa14.3□□□□□ -0.12
SMPD4-219ENST00000491128 ZNF354CQ86Y25 554 aa14.3□□□□□ -0.12
SMPD4-219ENST00000491128 IGDCC3Q8IVU1 814 aa14.3□□□□□ -0.12
SMPD4-219ENST00000491128 AGGF1Q8N302 714 aaeCLIP14.3□□□□□ -0.12
SMPD4-219ENST00000491128 MAB21L3Q8N8X9 362 aa14.3□□□□□ -0.12
SMPD4-219ENST00000491128 KREMEN2Q8NCW0 462 aa14.3□□□□□ -0.12
SMPD4-219ENST00000491128 ST13P5Q8NFI4 369 aaPredicted RBP14.3□□□□□ -0.12
SMPD4-219ENST00000491128 CORO1BQ9BR76 489 aa14.3□□□□□ -0.12
SMPD4-219ENST00000491128 DOCK6Q96HP0 2047 aa14.3□□□□□ -0.12
SMPD4-219ENST00000491128 A0A1W2PRU2 124 aa14.3□□□□□ -0.12
SMPD4-219ENST00000491128 USP12O75317 370 aa14.3□□□□□ -0.12
SMPD4-219ENST00000491128 JCHAINP01591 159 aa14.3□□□□□ -0.12
SMPD4-219ENST00000491128 PSMB4P28070 264 aa14.3□□□□□ -0.12
SMPD4-219ENST00000491128 MAGEA4P43358 317 aa14.3□□□□□ -0.12
SMPD4-219ENST00000491128 PRKD1Q15139 912 aaPredicted RBP14.3□□□□□ -0.12
SMPD4-219ENST00000491128 ALS2CLQ60I27 953 aa14.3□□□□□ -0.12
SMPD4-219ENST00000491128 ARHGAP12Q8IWW6 846 aa14.3□□□□□ -0.12
SMPD4-219ENST00000491128 GOLGA6L1Q8N7Z2 621 aa14.3□□□□□ -0.12
SMPD4-219ENST00000491128 SP7Q8TDD2 431 aaPredicted RBP14.3□□□□□ -0.12
SMPD4-219ENST00000491128 PSMG2Q969U7 264 aa14.3□□□□□ -0.12
SMPD4-219ENST00000491128 RXFP1Q9HBX9 757 aa14.3□□□□□ -0.12
SMPD4-219ENST00000491128 CTNNAL1Q9UBT7 734 aa14.3□□□□□ -0.12
SMPD4-219ENST00000491128 MYO18AQ92614 2054 aaKnown RBP14.3□□□□□ -0.12
SMPD4-219ENST00000491128 MYO9BQ13459 2157 aa14.3□□□□□ -0.12
SMPD4-219ENST00000491128 GARSP41250 739 aaKnown RBP14.29□□□□□ -0.12
SMPD4-219ENST00000491128 HCAR3P49019 387 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 RPS24P62847 133 aaKnown RBP14.29□□□□□ -0.12
SMPD4-219ENST00000491128 CRADDP78560 199 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 XRCC4Q13426 336 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 SLMAPQ14BN4 828 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 HIF1AQ16665 826 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 KRT71Q3SY84 523 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 LGI2Q8N0V4 545 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 PDCD7Q8N8D1 485 aaKnown RBP14.29□□□□□ -0.12
SMPD4-219ENST00000491128 MRPL43Q8N983 215 aaKnown RBP14.29□□□□□ -0.12
SMPD4-219ENST00000491128 BBOF1Q8ND07 529 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 BTN2A3PQ96KV6 586 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 HTATIP2Q9BUP3 242 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 ACBD3Q9H3P7 528 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 TLR9Q9NR96 1032 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 OLA1Q9NTK5 396 aaKnown RBP14.29□□□□□ -0.12
SMPD4-219ENST00000491128 FNIP2Q9P278 1114 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 PAK5Q9P286 719 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 KLHL8Q9P2G9 620 aaPredicted RBP14.29□□□□□ -0.12
SMPD4-219ENST00000491128 ACTL7AQ9Y615 435 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 KIAA1671Q9BY89 1806 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 TTC24A2A3L6 582 aaPredicted RBP14.29□□□□□ -0.12
SMPD4-219ENST00000491128 PPP1R12AO14974 1030 aaPredicted RBP14.29□□□□□ -0.12
SMPD4-219ENST00000491128 ZBTB24O43167 697 aaPredicted RBP14.29□□□□□ -0.12
SMPD4-219ENST00000491128 LRG1P02750 347 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 MBL2P11226 248 aaPredicted RBP14.29□□□□□ -0.12
SMPD4-219ENST00000491128 MYL4P12829 197 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 EPCAMP16422 314 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 PTPN3P26045 913 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 SSTR1P30872 391 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 CORO1AP31146 461 aaKnown RBP14.29□□□□□ -0.12
SMPD4-219ENST00000491128 GPS2Q13227 327 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 KCNJ11Q14654 390 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 LILRA6Q6PI73 481 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 ATP6V0D2Q8N8Y2 350 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 RTP4Q96DX8 246 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 NOL6Q9H6R4 1146 aaKnown RBP14.29□□□□□ -0.12
SMPD4-219ENST00000491128 IL21Q9HBE4 155 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 CHMP2BQ9UQN3 213 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 YBX2Q9Y2T7 364 aaKnown RBP14.29□□□□□ -0.12
SMPD4-219ENST00000491128 E7EVH7 732 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 F11P03951 625 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 ADH1AP07327 375 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 CCR2P41597 374 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 PAPOLAP51003 745 aaKnown RBP14.29□□□□□ -0.12
SMPD4-219ENST00000491128 OTOP3Q7RTS5 596 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 KDELC2Q7Z4H8 507 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 ZNF683Q8IZ20 524 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 MYRFLQ96LU7 910 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 APOL2Q9BQE5 337 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 ATXN3LQ9H3M9 355 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.29□□□□□ -0.12
SMPD4-219ENST00000491128 SLC12A6Q9UHW9 1150 aa14.29□□□□□ -0.12
SMPD4-219ENST00000491128 COL4A4P53420 1690 aaPredicted RBP14.28□□□□□ -0.12
SMPD4-219ENST00000491128 GREB1Q4ZG55 1949 aa14.28□□□□□ -0.12
SMPD4-219ENST00000491128 A0A0A0MRY4 1105 aa14.28□□□□□ -0.12
SMPD4-219ENST00000491128 GCATO75600 419 aa14.28□□□□□ -0.12
SMPD4-219ENST00000491128 STC2O76061 302 aa14.28□□□□□ -0.12
SMPD4-219ENST00000491128 TTC4O95801 387 aa14.28□□□□□ -0.12
SMPD4-219ENST00000491128 IGLV3-27P01718 113 aa14.28□□□□□ -0.12
SMPD4-219ENST00000491128 SLC2A3P11169 496 aa14.28□□□□□ -0.12
SMPD4-219ENST00000491128 LMAN1P49257 510 aa14.28□□□□□ -0.12
SMPD4-219ENST00000491128 NTHL1P78549 312 aa14.28□□□□□ -0.12
SMPD4-219ENST00000491128 CAV1Q03135 178 aa14.28□□□□□ -0.12
SMPD4-219ENST00000491128 GALNT2Q10471 571 aa14.28□□□□□ -0.12
SMPD4-219ENST00000491128 FAM133BQ5BKY9 247 aaKnown RBP14.28□□□□□ -0.12
SMPD4-219ENST00000491128 TTC19Q6DKK2 380 aaPredicted RBP14.28□□□□□ -0.12
SMPD4-219ENST00000491128 BZW1Q7L1Q6 419 aaKnown RBP14.28□□□□□ -0.12
SMPD4-219ENST00000491128 MPP5Q8N3R9 675 aa14.28□□□□□ -0.12
SMPD4-219ENST00000491128 FBXO36Q8NEA4 188 aa14.28□□□□□ -0.12
SMPD4-219ENST00000491128 OR52K2Q8NGK3 314 aa14.28□□□□□ -0.12
SMPD4-219ENST00000491128 TCEAL4Q96EI5 215 aa14.28□□□□□ -0.12
SMPD4-219ENST00000491128 SPATA13Q96N96 652 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms