RNA–Protein interactions for RNA: ENST00000491094.6

VPS72-205, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 4,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-205ENST00000491094 SLC9A4Q6AI14 798 aa11.42□□□□□ -0.58
VPS72-205ENST00000491094 ARCQ7LC44 396 aa11.42□□□□□ -0.58
VPS72-205ENST00000491094 KHSRPQ92945 711 aaKnown RBP eCLIP11.42□□□□□ -0.58
VPS72-205ENST00000491094 CELF6Q96J87 481 aaKnown RBP11.42□□□□□ -0.58
VPS72-205ENST00000491094 TSNARE1Q96NA8 513 aa11.42□□□□□ -0.58
VPS72-205ENST00000491094 FCRL3Q96P31 734 aaPredicted RBP11.42□□□□□ -0.58
VPS72-205ENST00000491094 PRPF18Q99633 342 aaKnown RBP11.42□□□□□ -0.58
VPS72-205ENST00000491094 FRMD8Q9BZ67 464 aaPredicted RBP11.42□□□□□ -0.58
VPS72-205ENST00000491094 HBP1O60381 514 aa11.42□□□□□ -0.58
VPS72-205ENST00000491094 CSPG5O95196 566 aa11.42□□□□□ -0.58
VPS72-205ENST00000491094 SPATA31D3P0C874 917 aa11.42□□□□□ -0.58
VPS72-205ENST00000491094 AOC1P19801 751 aa11.42□□□□□ -0.58
VPS72-205ENST00000491094 ALDH1A3P47895 512 aa11.42□□□□□ -0.58
VPS72-205ENST00000491094 POU5F1BQ06416 359 aa11.42□□□□□ -0.58
VPS72-205ENST00000491094 SPATA31D4Q6ZUB0 917 aa11.42□□□□□ -0.58
VPS72-205ENST00000491094 CATSPER4Q7RTX7 472 aa11.42□□□□□ -0.58
VPS72-205ENST00000491094 B4GALNT2Q8NHY0 566 aa11.42□□□□□ -0.58
VPS72-205ENST00000491094 LRRC39Q96DD0 335 aa11.42□□□□□ -0.58
VPS72-205ENST00000491094 TRAPPC9Q96Q05 1148 aa11.42□□□□□ -0.58
VPS72-205ENST00000491094 SORT1Q99523 831 aa11.42□□□□□ -0.58
VPS72-205ENST00000491094 GORASP1Q9BQQ3 440 aa11.42□□□□□ -0.58
VPS72-205ENST00000491094 UBE2OQ9C0C9 1292 aaKnown RBP11.42□□□□□ -0.58
VPS72-205ENST00000491094 SNX25Q9H3E2 840 aa11.42□□□□□ -0.58
VPS72-205ENST00000491094 ATXN3LQ9H3M9 355 aa11.42□□□□□ -0.58
VPS72-205ENST00000491094 CHRAC1Q9NRG0 131 aa11.42□□□□□ -0.58
VPS72-205ENST00000491094 BFARQ9NZS9 450 aa11.42□□□□□ -0.58
VPS72-205ENST00000491094 PPME1Q9Y570 386 aa11.42□□□□□ -0.58
VPS72-205ENST00000491094 COL11A2P13942 1736 aaPredicted RBP11.42□□□□□ -0.58
VPS72-205ENST00000491094 CRABP2P29373 138 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 CDK7P50613 346 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 ADIGQ0VDE8 80 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 GRM1Q13255 1194 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 MSLNQ13421 630 aaPredicted RBP11.41□□□□□ -0.58
VPS72-205ENST00000491094 VGLL4Q14135 290 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 TMCO4Q5TGY1 634 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 NCBP2-AS2Q69YL0 99 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 LBX2Q6XYB7 198 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 PCDH20Q8N6Y1 951 aaKnown RBP11.41□□□□□ -0.58
VPS72-205ENST00000491094 AFG1LQ8WV93 481 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 RCN3Q96D15 328 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 CERS2Q96G23 380 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 APBA2Q99767 749 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 ZNF670Q9BS34 389 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 MOCS1Q9NZB8 636 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 IRF6O14896 467 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 BUD23O43709 281 aaKnown RBP11.41□□□□□ -0.58
VPS72-205ENST00000491094 GCATO75600 419 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 GSRP00390 522 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 C2P06681 752 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 GP5P40197 560 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 USP10Q14694 798 aaKnown RBP11.41□□□□□ -0.58
VPS72-205ENST00000491094 C6orf52Q5T4I8 152 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 FSTL4Q6MZW2 842 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 PDSS2Q86YH6 399 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 ZNF567Q8N184 647 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 MCUQ8NE86 351 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 RNF34Q969K3 372 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 HIC2Q96JB3 615 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 ZMAT2Q96NC0 199 aaKnown RBP11.41□□□□□ -0.58
VPS72-205ENST00000491094 EPAS1Q99814 870 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 SIK2Q9H0K1 926 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 CYP4F12Q9HCS2 524 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.41□□□□□ -0.58
VPS72-205ENST00000491094 CITO14578 2027 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 RTN3O95197 1032 aaPredicted RBP11.41□□□□□ -0.58
VPS72-205ENST00000491094 PIGNO95427 931 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 ARSAP15289 507 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 GNL1P36915 607 aaPredicted RBP11.41□□□□□ -0.58
VPS72-205ENST00000491094 GRIA2P42262 883 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 TNFAIP2Q03169 654 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 GSTA3Q16772 222 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 LRRC23Q53EV4 343 aaPredicted RBP11.41□□□□□ -0.58
VPS72-205ENST00000491094 FSCBQ5H9T9 825 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 RPS27LQ71UM5 84 aaKnown RBP11.41□□□□□ -0.58
VPS72-205ENST00000491094 FBXW8Q8N3Y1 598 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 CEP70Q8NHQ1 597 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 SLC7A14Q8TBB6 771 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 GATA5Q9BWX5 397 aaPredicted RBP11.41□□□□□ -0.58
VPS72-205ENST00000491094 LRRC4Q9HBW1 653 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 TIMM13Q9Y5L4 95 aaPredicted RBP11.41□□□□□ -0.58
VPS72-205ENST00000491094 CSADQ9Y600 493 aa11.41□□□□□ -0.58
VPS72-205ENST00000491094 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.4□□□□□ -0.58
VPS72-205ENST00000491094 TMEM233B4DJY2 109 aa11.4□□□□□ -0.58
VPS72-205ENST00000491094 XRCC1P18887 633 aaPredicted RBP11.4□□□□□ -0.58
VPS72-205ENST00000491094 SREK1Q8WXA9 508 aaKnown RBP11.4□□□□□ -0.58
VPS72-205ENST00000491094 NPAS2Q99743 824 aa11.4□□□□□ -0.58
VPS72-205ENST00000491094 TXNRD2Q9NNW7 524 aa11.4□□□□□ -0.58
VPS72-205ENST00000491094 GTSE1Q9NYZ3 720 aa11.4□□□□□ -0.58
VPS72-205ENST00000491094 RUVBL2Q9Y230 463 aaKnown RBP11.4□□□□□ -0.58
VPS72-205ENST00000491094 EVPLQ92817 2033 aa11.4□□□□□ -0.58
VPS72-205ENST00000491094 C15orf38-AP3S2A0A0A6YYH1 394 aa11.4□□□□□ -0.58
VPS72-205ENST00000491094 SPRP35270 261 aaPredicted RBP11.4□□□□□ -0.58
VPS72-205ENST00000491094 PLK1P53350 603 aa11.4□□□□□ -0.58
VPS72-205ENST00000491094 COG7P83436 770 aa11.4□□□□□ -0.58
VPS72-205ENST00000491094 TUBB3Q13509 450 aa11.4□□□□□ -0.58
VPS72-205ENST00000491094 SLC5A9Q2M3M2 681 aa11.4□□□□□ -0.58
VPS72-205ENST00000491094 RBM44Q6ZP01 1051 aaKnown RBP11.4□□□□□ -0.58
VPS72-205ENST00000491094 ARPINQ7Z6K5 226 aa11.4□□□□□ -0.58
VPS72-205ENST00000491094 RAB3IL1Q8TBN0 382 aa11.4□□□□□ -0.58
VPS72-205ENST00000491094 RNF139Q8WU17 664 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms