RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 PSMA8Q8TAA3 256 aa11.52□□□□□ -0.56
CRNKL1-204ENST00000490910 TMEM143Q96AN5 459 aa11.52□□□□□ -0.56
CRNKL1-204ENST00000490910 CRAMP1Q96RY5 1269 aa11.52□□□□□ -0.56
CRNKL1-204ENST00000490910 PCDH12Q9NPG4 1184 aa11.52□□□□□ -0.56
CRNKL1-204ENST00000490910 NARFQ9UHQ1 456 aa11.52□□□□□ -0.56
CRNKL1-204ENST00000490910 PCDHA11Q9Y5I1 949 aa11.52□□□□□ -0.56
CRNKL1-204ENST00000490910 A0A1W2PPW3 197 aa11.52□□□□□ -0.57
CRNKL1-204ENST00000490910 PLIN3O60664 434 aa11.52□□□□□ -0.57
CRNKL1-204ENST00000490910 TAL1P17542 331 aaPredicted RBP11.52□□□□□ -0.57
CRNKL1-204ENST00000490910 CLCN2P51788 898 aa11.52□□□□□ -0.57
CRNKL1-204ENST00000490910 CES3Q6UWW8 571 aa11.52□□□□□ -0.57
CRNKL1-204ENST00000490910 MAP4K3Q8IVH8 894 aa11.52□□□□□ -0.57
CRNKL1-204ENST00000490910 FAM156AQ8NDB6 213 aa11.52□□□□□ -0.57
CRNKL1-204ENST00000490910 UBA3Q8TBC4 463 aa11.52□□□□□ -0.57
CRNKL1-204ENST00000490910 RXFP2Q8WXD0 754 aa11.52□□□□□ -0.57
CRNKL1-204ENST00000490910 LPGAT1Q92604 370 aa11.52□□□□□ -0.57
CRNKL1-204ENST00000490910 CHID1Q9BWS9 393 aa11.52□□□□□ -0.57
CRNKL1-204ENST00000490910 ASPSCR1Q9BZE9 553 aa11.52□□□□□ -0.57
CRNKL1-204ENST00000490910 LRRC4Q9HBW1 653 aa11.52□□□□□ -0.57
CRNKL1-204ENST00000490910 CYP4F12Q9HCS2 524 aa11.52□□□□□ -0.57
CRNKL1-204ENST00000490910 KIF17Q9P2E2 1029 aa11.52□□□□□ -0.57
CRNKL1-204ENST00000490910 MED1Q15648 1581 aaPredicted RBP11.52□□□□□ -0.57
CRNKL1-204ENST00000490910 PSMD10O75832 226 aa11.52□□□□□ -0.57
CRNKL1-204ENST00000490910 DSG3P32926 999 aa11.52□□□□□ -0.57
CRNKL1-204ENST00000490910 YWHAZP63104 245 aaKnown RBP11.52□□□□□ -0.57
CRNKL1-204ENST00000490910 MOGQ16653 247 aa11.52□□□□□ -0.57
CRNKL1-204ENST00000490910 SEZ6Q53EL9 994 aa11.52□□□□□ -0.57
CRNKL1-204ENST00000490910 OGFOD2Q6N063 350 aa11.52□□□□□ -0.57
CRNKL1-204ENST00000490910 NAT8LQ8N9F0 302 aa11.52□□□□□ -0.57
CRNKL1-204ENST00000490910 SNX31Q8N9S9 440 aa11.52□□□□□ -0.57
CRNKL1-204ENST00000490910 NCSTNQ92542 709 aa11.52□□□□□ -0.57
CRNKL1-204ENST00000490910 CGRRF1Q99675 332 aa11.52□□□□□ -0.57
CRNKL1-204ENST00000490910 MED10Q9BTT4 135 aa11.52□□□□□ -0.57
CRNKL1-204ENST00000490910 DUOX1Q9NRD9 1551 aa11.52□□□□□ -0.57
CRNKL1-204ENST00000490910 DHRS12A0PJE2 317 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 FUOMA2VDF0 154 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 K7EPI3 171 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 PPP1R11O60927 126 aaPredicted RBP11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 SERPINI2O75830 405 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 TFAP2AP05549 437 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 NFIXQ14938 502 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 DLGAP5Q15398 846 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 PABPC1LQ4VXU2 614 aaKnown RBP11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 OGFRL1Q5TC84 451 aaPredicted RBP11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 PRMT9Q6P2P2 845 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 ATG14Q6ZNE5 492 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 CBR4Q8N4T8 237 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 VAV3Q9UKW4 847 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 SUPT7LO94864 414 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 CYP1A1P04798 512 aaPredicted RBP11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 CYP3A4P08684 503 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 ALOX12P18054 663 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 GDF10P55107 478 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 CRADDP78560 199 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 NFYCQ13952 458 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 ZIK1Q3SY52 487 aaPredicted RBP11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 TMEM126BQ8IUX1 230 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 COLGALT1Q8NBJ5 622 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 REXO4Q9GZR2 422 aaKnown RBP11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 IARS2Q9NSE4 1012 aaKnown RBP11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 BHMG1C9JSJ3 638 aaPredicted RBP11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 WDR47O94967 919 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 NADKO95544 446 aaPredicted RBP11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 ERVK-10P10266 1014 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 UNGP13051 313 aaPredicted RBP11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 MMP8P22894 467 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 PHKA2P46019 1235 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 INHBCP55103 352 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 PPIL2Q13356 520 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 CARTPTQ16568 116 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 MSS51Q4VC12 460 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 C6orf10Q5SRN2 563 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 TMTC4Q5T4D3 741 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 C3orf67Q6ZVT6 689 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 KCTD8Q6ZWB6 473 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 SLCO6A1Q86UG4 719 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 C8orf59Q8N0T1 100 aaPredicted RBP11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 OR6B3Q8NGW1 331 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 ISOC1Q96CN7 298 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 NLRP4Q96MN2 994 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 ADI1Q9BV57 179 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 FSD1LQ9BXM9 530 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 C6orf62Q9GZU0 229 aaPredicted RBP11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 MAF1Q9H063 256 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 FEM1BQ9UK73 627 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 ARIH1Q9Y4X5 557 aaPredicted RBP11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 ANGPTL3Q9Y5C1 460 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 DGKBQ9Y6T7 804 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 C1orf167Q5SNV9 1468 aa11.51□□□□□ -0.57
CRNKL1-204ENST00000490910 MYO5AQ9Y4I1 1855 aaKnown RBP11.5□□□□□ -0.57
CRNKL1-204ENST00000490910 MED26O95402 600 aa11.5□□□□□ -0.57
CRNKL1-204ENST00000490910 SNRPB2P08579 225 aaKnown RBP11.5□□□□□ -0.57
CRNKL1-204ENST00000490910 ATP6V1B2P21281 511 aa11.5□□□□□ -0.57
CRNKL1-204ENST00000490910 GRIA4P48058 902 aa11.5□□□□□ -0.57
CRNKL1-204ENST00000490910 LSM3P62310 102 aaKnown RBP11.5□□□□□ -0.57
CRNKL1-204ENST00000490910 GAD2Q05329 585 aa11.5□□□□□ -0.57
CRNKL1-204ENST00000490910 PPM1LQ5SGD2 360 aa11.5□□□□□ -0.57
CRNKL1-204ENST00000490910 TMEM26Q6ZUK4 368 aa11.5□□□□□ -0.57
CRNKL1-204ENST00000490910 ANKRD13AQ8IZ07 590 aa11.5□□□□□ -0.57
CRNKL1-204ENST00000490910 SEPT8Q92599 483 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms