RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 NAP1L5Q96NT1 182 aaPredicted RBP15.7■□□□□ 0.1
COL27A1-206ENST00000490831 AGPAT1Q99943 283 aa15.7■□□□□ 0.1
COL27A1-206ENST00000490831 TKTL2Q9H0I9 626 aa15.7■□□□□ 0.1
COL27A1-206ENST00000490831 CD93Q9NPY3 652 aa15.7■□□□□ 0.1
COL27A1-206ENST00000490831 SUN2Q9UH99 717 aa15.7■□□□□ 0.1
COL27A1-206ENST00000490831 CYP8B1Q9UNU6 501 aa15.7■□□□□ 0.1
COL27A1-206ENST00000490831 LAMA1P25391 3075 aa15.7■□□□□ 0.1
COL27A1-206ENST00000490831 GON4LQ3T8J9 2241 aa15.7■□□□□ 0.1
COL27A1-206ENST00000490831 SLC30A4O14863 429 aa15.69■□□□□ 0.1
COL27A1-206ENST00000490831 GDF9O60383 454 aa15.69■□□□□ 0.1
COL27A1-206ENST00000490831 MOCS3O95396 460 aa15.69■□□□□ 0.1
COL27A1-206ENST00000490831 SRPRAP08240 638 aaKnown RBP15.69■□□□□ 0.1
COL27A1-206ENST00000490831 HOXD12P35452 270 aa15.69■□□□□ 0.1
COL27A1-206ENST00000490831 NSFP46459 744 aaKnown RBP15.69■□□□□ 0.1
COL27A1-206ENST00000490831 VASPP50552 380 aaPredicted RBP15.69■□□□□ 0.1
COL27A1-206ENST00000490831 RPL6Q02878 288 aaKnown RBP15.69■□□□□ 0.1
COL27A1-206ENST00000490831 NR1I3Q14994 352 aa15.69■□□□□ 0.1
COL27A1-206ENST00000490831 KIAA1324Q6UXG2 1013 aaKnown RBP15.69■□□□□ 0.1
COL27A1-206ENST00000490831 SND1Q7KZF4 910 aaKnown RBP eCLIP15.69■□□□□ 0.1
COL27A1-206ENST00000490831 C14orf80Q86SX3 495 aa15.69■□□□□ 0.1
COL27A1-206ENST00000490831 SYT12Q8IV01 421 aa15.69■□□□□ 0.1
COL27A1-206ENST00000490831 C12orf50Q8NA57 414 aaPredicted RBP15.69■□□□□ 0.1
COL27A1-206ENST00000490831 PRCCQ92733 491 aaPredicted RBP15.69■□□□□ 0.1
COL27A1-206ENST00000490831 ALG14Q96F25 216 aa15.69■□□□□ 0.1
COL27A1-206ENST00000490831 ZNF419Q96HQ0 510 aaPredicted RBP15.69■□□□□ 0.1
COL27A1-206ENST00000490831 CFAP57Q96MR6 1250 aa15.69■□□□□ 0.1
COL27A1-206ENST00000490831 RPRD1AQ96P16 312 aaPredicted RBP15.69■□□□□ 0.1
COL27A1-206ENST00000490831 C11orf70Q9BRQ4 267 aa15.69■□□□□ 0.1
COL27A1-206ENST00000490831 RTKNQ9BST9 563 aa15.69■□□□□ 0.1
COL27A1-206ENST00000490831 SMOC1Q9H4F8 434 aa15.69■□□□□ 0.1
COL27A1-206ENST00000490831 CBX8Q9HC52 389 aa15.69■□□□□ 0.1
COL27A1-206ENST00000490831 PRSS16Q9NQE7 514 aa15.69■□□□□ 0.1
COL27A1-206ENST00000490831 METTL5Q9NRN9 209 aaKnown RBP15.69■□□□□ 0.1
COL27A1-206ENST00000490831 WSB2Q9NYS7 404 aaPredicted RBP15.69■□□□□ 0.1
COL27A1-206ENST00000490831 EVLQ9UI08 416 aaPredicted RBP15.69■□□□□ 0.1
COL27A1-206ENST00000490831 CDV3Q9UKY7 258 aaKnown RBP15.69■□□□□ 0.1
COL27A1-206ENST00000490831 VANGL2Q9ULK5 521 aa15.69■□□□□ 0.1
COL27A1-206ENST00000490831 TBC1D30Q9Y2I9 924 aa15.69■□□□□ 0.1
COL27A1-206ENST00000490831 ITIH6Q6UXX5 1313 aa15.68■□□□□ 0.1
COL27A1-206ENST00000490831 IGLV3-10A0A075B6K4 115 aa15.68■□□□□ 0.1
COL27A1-206ENST00000490831 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.68■□□□□ 0.1
COL27A1-206ENST00000490831 TCRBV5S1A1TA0A578 114 aa15.68■□□□□ 0.1
COL27A1-206ENST00000490831 FAM170AA1A519 330 aa15.68■□□□□ 0.1
COL27A1-206ENST00000490831 C2CD4BA6NLJ0 364 aa15.68■□□□□ 0.1
COL27A1-206ENST00000490831 DRGXA6NNA5 263 aa15.68■□□□□ 0.1
COL27A1-206ENST00000490831 CLDN11O75508 207 aa15.68■□□□□ 0.1
COL27A1-206ENST00000490831 CALB1P05937 261 aa15.68■□□□□ 0.1
COL27A1-206ENST00000490831 CD6P30203 668 aa15.68■□□□□ 0.1
COL27A1-206ENST00000490831 OXTRP30559 389 aa15.68■□□□□ 0.1
COL27A1-206ENST00000490831 RDXP35241 583 aaKnown RBP15.68■□□□□ 0.1
COL27A1-206ENST00000490831 PTPN9P43378 593 aa15.68■□□□□ 0.1
COL27A1-206ENST00000490831 TPMTP51580 245 aa15.68■□□□□ 0.1
COL27A1-206ENST00000490831 IRAK1P51617 712 aa15.68■□□□□ 0.1
COL27A1-206ENST00000490831 ATXN1P54253 815 aaKnown RBP15.68■□□□□ 0.1
COL27A1-206ENST00000490831 CDH4P55283 916 aa15.68■□□□□ 0.1
COL27A1-206ENST00000490831 ECT2LQ008S8 904 aa15.68■□□□□ 0.1
COL27A1-206ENST00000490831 ZBTB16Q05516 673 aa15.68■□□□□ 0.1
COL27A1-206ENST00000490831 HNRNPA1L2Q32P51 320 aaKnown RBP15.68■□□□□ 0.1
COL27A1-206ENST00000490831 LYSMD4Q5XG99 296 aa15.68■□□□□ 0.1
COL27A1-206ENST00000490831 MON1BQ7L1V2 547 aa15.68■□□□□ 0.1
COL27A1-206ENST00000490831 CIR1Q86X95 450 aaPredicted RBP15.68■□□□□ 0.1
COL27A1-206ENST00000490831 SLC41A1Q8IVJ1 513 aa15.68■□□□□ 0.1
COL27A1-206ENST00000490831 APCDD1Q8J025 514 aa15.68■□□□□ 0.1
COL27A1-206ENST00000490831 C3orf20Q8ND61 904 aa15.68■□□□□ 0.1
COL27A1-206ENST00000490831 HAPLN3Q96S86 360 aa15.68■□□□□ 0.1
COL27A1-206ENST00000490831 TTYH3Q9C0H2 523 aa15.68■□□□□ 0.1
COL27A1-206ENST00000490831 RXFP3Q9NSD7 469 aa15.68■□□□□ 0.1
COL27A1-206ENST00000490831 ADAM22Q9P0K1 906 aa15.68■□□□□ 0.1
COL27A1-206ENST00000490831 PILRBQ9UKJ0 227 aa15.68■□□□□ 0.1
COL27A1-206ENST00000490831 ERVW-1Q9UQF0 538 aa15.68■□□□□ 0.1
COL27A1-206ENST00000490831 OR51B4Q9Y5P0 310 aa15.68■□□□□ 0.1
COL27A1-206ENST00000490831 CEP192Q8TEP8 1941 aa15.67■□□□□ 0.1
COL27A1-206ENST00000490831 MZF1P28698 734 aaPredicted RBP15.67■□□□□ 0.1
COL27A1-206ENST00000490831 CTSOP43234 321 aaPredicted RBP15.67■□□□□ 0.1
COL27A1-206ENST00000490831 ST8SIA6P61647 398 aa15.67■□□□□ 0.1
COL27A1-206ENST00000490831 SULT2A1Q06520 285 aa15.67■□□□□ 0.1
COL27A1-206ENST00000490831 ZNF33AQ06730 810 aa15.67■□□□□ 0.1
COL27A1-206ENST00000490831 C1QBPQ07021 282 aaKnown RBP15.67■□□□□ 0.1
COL27A1-206ENST00000490831 SKOR2Q2VWA4 1001 aaPredicted RBP15.67■□□□□ 0.1
COL27A1-206ENST00000490831 CCDC14Q49A88 953 aa15.67■□□□□ 0.1
COL27A1-206ENST00000490831 AASDHQ4L235 1098 aaPredicted RBP15.67■□□□□ 0.1
COL27A1-206ENST00000490831 FIGNQ5HY92 759 aa15.67■□□□□ 0.1
COL27A1-206ENST00000490831 TCEAL6Q6IPX3 200 aa15.67■□□□□ 0.1
COL27A1-206ENST00000490831 EMC1Q8N766 993 aa15.67■□□□□ 0.1
COL27A1-206ENST00000490831 ZNF366Q8N895 744 aa15.67■□□□□ 0.1
COL27A1-206ENST00000490831 OR52K2Q8NGK3 314 aa15.67■□□□□ 0.1
COL27A1-206ENST00000490831 JOSD2Q8TAC2 188 aa15.67■□□□□ 0.1
COL27A1-206ENST00000490831 RXFP2Q8WXD0 754 aa15.67■□□□□ 0.1
COL27A1-206ENST00000490831 PIGKQ92643 395 aa15.67■□□□□ 0.1
COL27A1-206ENST00000490831 CENPIQ92674 756 aaPredicted RBP15.67■□□□□ 0.1
COL27A1-206ENST00000490831 TCEAL3Q969E4 200 aa15.67■□□□□ 0.1
COL27A1-206ENST00000490831 PPP1R9BQ96SB3 815 aa15.67■□□□□ 0.1
COL27A1-206ENST00000490831 EDEM3Q9BZQ6 932 aa15.67■□□□□ 0.1
COL27A1-206ENST00000490831 SIK2Q9H0K1 926 aa15.67■□□□□ 0.1
COL27A1-206ENST00000490831 TMEM74BQ9NUR3 256 aa15.67■□□□□ 0.1
COL27A1-206ENST00000490831 AIPL1Q9NZN9 384 aa15.67■□□□□ 0.1
COL27A1-206ENST00000490831 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.66■□□□□ 0.1
COL27A1-206ENST00000490831 LNP1A1A4G5 178 aa15.66■□□□□ 0.1
COL27A1-206ENST00000490831 TARSL2A2RTX5 802 aaKnown RBP15.66■□□□□ 0.1
COL27A1-206ENST00000490831 LRRC53A6NM62 1247 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms