RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 MGAT1P26572 445 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 MAPK8P45983 427 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 HSP90AA5PQ58FG0 334 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 USP45Q70EL2 814 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 OTOAQ7RTW8 1153 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 KIRREL3Q8IZU9 778 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 RIBC1Q8N443 379 aaPredicted RBP14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 LRRC37BQ96QE4 947 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 AGO3Q9H9G7 860 aaKnown RBP14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 ACOT9Q9Y305 439 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 ZNF7P17097 686 aaPredicted RBP14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 SOWAHAQ2M3V2 549 aa14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 SETMARQ53H47 684 aaPredicted RBP14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 AADACL2Q6P093 401 aa14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 CES3Q6UWW8 571 aa14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 SLC26A9Q7LBE3 791 aa14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 LRRC49Q8IUZ0 686 aa14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 ZIM3Q96PE6 472 aa14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 ZNF670Q9BS34 389 aa14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 CDC42EP4Q9H3Q1 356 aaKnown RBP14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 L2HGDHQ9H9P8 463 aa14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 GPAMQ9HCL2 828 aa14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 ADGRA2Q96PE1 1338 aa14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 IRS2Q9Y4H2 1338 aa14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 RNF225M0QZC1 329 aaPredicted RBP14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 C1RP00736 705 aa14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 CYBAP13498 195 aa14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 PECAM1P16284 738 aaPredicted RBP14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 GLRBP48167 497 aa14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 MARCKSL1P49006 195 aa14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 POLNQ7Z5Q5 900 aa14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 NETO2Q8NC67 525 aa14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 HIPK4Q8NE63 616 aa14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 ARMC2Q8NEN0 867 aa14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 TMEM159Q96B96 161 aa14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 ZIC5Q96T25 663 aa14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 MLPHQ9BV36 600 aaPredicted RBP14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 ZNF510Q9Y2H8 683 aa14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 COQ4Q9Y3A0 265 aa14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 CPQQ9Y646 472 aa14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 KAT6AQ92794 2004 aa14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 SPECC1L-ADORA2AF8WAN1 911 aa14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 DNALI1O14645 258 aaPredicted RBP14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 BUD23O43709 281 aaKnown RBP14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 NFATC1O95644 943 aa14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 ITGBL1O95965 494 aaPredicted RBP14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 WARSP23381 471 aaKnown RBP14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 HSD17B3P37058 310 aa14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 MAXP61244 160 aa14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 PHEXP78562 749 aa14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 BBS12Q6ZW61 710 aa14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 KDM4CQ9H3R0 1056 aa14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 ATP13A3Q9H7F0 1226 aa14.69□□□□□ -0.06
ARHGEF39-205ENST00000490638 DNAJC25-GNG10A0A024R161 153 aa14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 A0A0A0MRY4 1105 aa14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 TMEM120BA0PK00 339 aa14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 CLDN11O75508 207 aa14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 HAUS5O94927 633 aa14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 ZSCAN5DPP0CG00 497 aa14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 RFC2P35250 354 aa14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 CD86P42081 329 aa14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 NPY2RP49146 381 aa14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 BOP1Q14137 746 aaKnown RBP14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 EFTUD2Q15029 972 aaKnown RBP eCLIP14.68□□□□□ -0.063e-6■■■■■ 41.9
ARHGEF39-205ENST00000490638 HIST2H2ACQ16777 129 aaPredicted RBP14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 PARP6Q2NL67 630 aa14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 HIST2H2AA3Q6FI13 130 aa14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 DOK6Q6PKX4 331 aa14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 LRIG3Q6UXM1 1119 aa14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 GBP7Q8N8V2 638 aaPredicted RBP14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 SPATA13Q96N96 652 aa14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 WWP1Q9H0M0 922 aa14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 CNTRLQ7Z7A1 2325 aa14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 TCP11X1B4DZS4 312 aa14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 CAMK2GQ13555 558 aaPredicted RBP14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 MORN1Q5T089 497 aa14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 LGMNQ99538 433 aa14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 ENPP3O14638 875 aa14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 PPFIA2O75334 1257 aa14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 DDX5P17844 614 aaKnown RBP14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 TAS2R40P59535 323 aa14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 ANKRD20A2Q5SQ80 823 aa14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 ANKRD20A1Q5TYW2 823 aa14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 ZNF470Q6ECI4 717 aa14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 SLC26A11Q86WA9 606 aa14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 RSRC1Q96IZ7 334 aaKnown RBP14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 FAM124BQ9H5Z6 455 aaPredicted RBP14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 KIAA1522Q9P206 1035 aaPredicted RBP14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 RNF112Q9ULX5 631 aa14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 CNMDO75829 334 aa14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 PSMB4P28070 264 aa14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 SLC11A1P49279 550 aa14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 GUCY1A3Q02108 690 aa14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 ACBD5Q5T8D3 534 aaPredicted RBP14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 TPGS2Q68CL5 300 aa14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 RFWD3Q6PCD5 774 aa14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 SLC26A7Q8TE54 656 aa14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 SUSD3Q96L08 255 aa14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 PCDHB9Q9Y5E1 797 aa14.68□□□□□ -0.06
ARHGEF39-205ENST00000490638 ITGB4P16144 1822 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms