RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 LMLNQ96KR4 655 aa18.01■□□□□ 0.47
SEC13-218ENST00000490283 NPY6RQ99463 290 aa18.01■□□□□ 0.47
SEC13-218ENST00000490283 PRMT1Q99873 361 aaKnown RBP18.01■□□□□ 0.47
SEC13-218ENST00000490283 GPR174Q9BXC1 333 aa18.01■□□□□ 0.47
SEC13-218ENST00000490283 PRSS16Q9NQE7 514 aa18.01■□□□□ 0.47
SEC13-218ENST00000490283 TMEM74BQ9NUR3 256 aa18.01■□□□□ 0.47
SEC13-218ENST00000490283 TMEM63CQ9P1W3 806 aa18.01■□□□□ 0.47
SEC13-218ENST00000490283 SLC6A14Q9UN76 642 aa18.01■□□□□ 0.47
SEC13-218ENST00000490283 DMXL1Q9Y485 3027 aa18.01■□□□□ 0.47
SEC13-218ENST00000490283 PLXND1Q9Y4D7 1925 aa18■□□□□ 0.47
SEC13-218ENST00000490283 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18■□□□□ 0.47
SEC13-218ENST00000490283 FAM170AA1A519 330 aa18■□□□□ 0.47
SEC13-218ENST00000490283 PAGE1O75459 146 aa18■□□□□ 0.47
SEC13-218ENST00000490283 IGLV3-19P01714 112 aa18■□□□□ 0.47
SEC13-218ENST00000490283 SERPINF2P08697 491 aa18■□□□□ 0.47
SEC13-218ENST00000490283 CCDC172P0C7W6 258 aa18■□□□□ 0.47
SEC13-218ENST00000490283 PDGFRAP16234 1089 aa18■□□□□ 0.47
SEC13-218ENST00000490283 ZNF18P17022 549 aa18■□□□□ 0.47
SEC13-218ENST00000490283 ECT2LQ008S8 904 aa18■□□□□ 0.47
SEC13-218ENST00000490283 ZNF177Q13360 481 aaPredicted RBP18■□□□□ 0.47
SEC13-218ENST00000490283 AUHQ13825 339 aaKnown RBP18■□□□□ 0.47
SEC13-218ENST00000490283 PLEKHG6Q3KR16 790 aa18■□□□□ 0.47
SEC13-218ENST00000490283 LRRC31Q6UY01 552 aa18■□□□□ 0.47
SEC13-218ENST00000490283 MMS22LQ6ZRQ5 1243 aa18■□□□□ 0.47
SEC13-218ENST00000490283 FAM124AQ86V42 546 aa18■□□□□ 0.47
SEC13-218ENST00000490283 CIR1Q86X95 450 aaPredicted RBP18■□□□□ 0.47
SEC13-218ENST00000490283 SLC41A1Q8IVJ1 513 aa18■□□□□ 0.47
SEC13-218ENST00000490283 SLC20A1Q8WUM9 679 aa18■□□□□ 0.47
SEC13-218ENST00000490283 PGAP3Q96FM1 320 aaPredicted RBP18■□□□□ 0.47
SEC13-218ENST00000490283 ERGIC2Q96RQ1 377 aa18■□□□□ 0.47
SEC13-218ENST00000490283 TKTL2Q9H0I9 626 aa18■□□□□ 0.47
SEC13-218ENST00000490283 SIK2Q9H0K1 926 aa18■□□□□ 0.47
SEC13-218ENST00000490283 PIGVQ9NUD9 493 aa18■□□□□ 0.47
SEC13-218ENST00000490283 NOCTQ9UK39 431 aaKnown RBP18■□□□□ 0.47
SEC13-218ENST00000490283 INTS6Q9UL03 887 aaKnown RBP18■□□□□ 0.47
SEC13-218ENST00000490283 VANGL2Q9ULK5 521 aa18■□□□□ 0.47
SEC13-218ENST00000490283 ERVW-1Q9UQF0 538 aa18■□□□□ 0.47
SEC13-218ENST00000490283 HS3ST4Q9Y661 456 aa18■□□□□ 0.47
SEC13-218ENST00000490283 CACNA1AO00555 2505 aa17.99■□□□□ 0.47
SEC13-218ENST00000490283 EDDM13A0A1B0GTR0 161 aa17.99■□□□□ 0.47
SEC13-218ENST00000490283 LRRC10BA6NIK2 292 aa17.99■□□□□ 0.47
SEC13-218ENST00000490283 EPHB6O15197 1021 aa17.99■□□□□ 0.47
SEC13-218ENST00000490283 CLDN11O75508 207 aa17.99■□□□□ 0.47
SEC13-218ENST00000490283 MAPK8P45983 427 aa17.99■□□□□ 0.47
SEC13-218ENST00000490283 NSFP46459 744 aaKnown RBP17.99■□□□□ 0.47
SEC13-218ENST00000490283 CXCR3P49682 368 aa17.99■□□□□ 0.47
SEC13-218ENST00000490283 NCAPHQ15003 741 aa17.99■□□□□ 0.47
SEC13-218ENST00000490283 HNRNPA1L2Q32P51 320 aaKnown RBP17.99■□□□□ 0.47
SEC13-218ENST00000490283 FILIP1LQ4L180 1135 aa17.99■□□□□ 0.47
SEC13-218ENST00000490283 C2CD6Q53TS8 623 aa17.99■□□□□ 0.47
SEC13-218ENST00000490283 GANCQ8TET4 914 aa17.99■□□□□ 0.47
SEC13-218ENST00000490283 TBCBQ99426 244 aa17.99■□□□□ 0.47
SEC13-218ENST00000490283 BPIFA3Q9BQP9 254 aa17.99■□□□□ 0.47
SEC13-218ENST00000490283 PCED1AQ9H1Q7 454 aa17.99■□□□□ 0.47
SEC13-218ENST00000490283 SEPT11Q9NVA2 429 aaKnown RBP17.99■□□□□ 0.47
SEC13-218ENST00000490283 ARHGEF38Q9NXL2 777 aa17.99■□□□□ 0.47
SEC13-218ENST00000490283 SCML1Q9UN30 329 aa17.99■□□□□ 0.47
SEC13-218ENST00000490283 NCKAP1Q9Y2A7 1128 aa17.99■□□□□ 0.47
SEC13-218ENST00000490283 TARSL2A2RTX5 802 aaKnown RBP17.98■□□□□ 0.47
SEC13-218ENST00000490283 CYP1A1P04798 512 aaPredicted RBP17.98■□□□□ 0.47
SEC13-218ENST00000490283 SYPP08247 313 aa17.98■□□□□ 0.47
SEC13-218ENST00000490283 ENGP17813 658 aa17.98■□□□□ 0.47
SEC13-218ENST00000490283 RDXP35241 583 aaKnown RBP17.98■□□□□ 0.47
SEC13-218ENST00000490283 RPS14P62263 151 aaKnown RBP17.98■□□□□ 0.47
SEC13-218ENST00000490283 FMO1Q01740 532 aa17.98■□□□□ 0.47
SEC13-218ENST00000490283 CENPCQ03188 943 aa17.98■□□□□ 0.47
SEC13-218ENST00000490283 UAP1L1Q3KQV9 507 aa17.98■□□□□ 0.47
SEC13-218ENST00000490283 ARCQ7LC44 396 aa17.98■□□□□ 0.47
SEC13-218ENST00000490283 DHX40Q8IX18 779 aaKnown RBP17.98■□□□□ 0.47
SEC13-218ENST00000490283 APCDD1Q8J025 514 aa17.98■□□□□ 0.47
SEC13-218ENST00000490283 NT5C3BQ969T7 300 aa17.98■□□□□ 0.47
SEC13-218ENST00000490283 GTPBP2Q9BX10 602 aaKnown RBP17.98■□□□□ 0.47
SEC13-218ENST00000490283 BTBD1Q9H0C5 482 aa17.98■□□□□ 0.47
SEC13-218ENST00000490283 MIR1-1HGQ9H1L0 117 aa17.98■□□□□ 0.47
SEC13-218ENST00000490283 METTL5Q9NRN9 209 aaKnown RBP17.98■□□□□ 0.47
SEC13-218ENST00000490283 SLC25A13Q9UJS0 675 aa17.98■□□□□ 0.47
SEC13-218ENST00000490283 SIN3BO75182 1162 aa17.97■□□□□ 0.47
SEC13-218ENST00000490283 ADCY5O95622 1261 aa17.97■□□□□ 0.47
SEC13-218ENST00000490283 MMP8P22894 467 aa17.97■□□□□ 0.47
SEC13-218ENST00000490283 FLT3P36888 993 aa17.97■□□□□ 0.47
SEC13-218ENST00000490283 GGCXP38435 758 aa17.97■□□□□ 0.47
SEC13-218ENST00000490283 CTSOP43234 321 aaPredicted RBP17.97■□□□□ 0.47
SEC13-218ENST00000490283 CDH4P55283 916 aa17.97■□□□□ 0.47
SEC13-218ENST00000490283 ARID5BQ14865 1188 aa17.97■□□□□ 0.47
SEC13-218ENST00000490283 DCAF12L1Q5VU92 463 aa17.97■□□□□ 0.47
SEC13-218ENST00000490283 OTUD1Q5VV17 481 aaPredicted RBP17.97■□□□□ 0.47
SEC13-218ENST00000490283 HDDC3Q8N4P3 179 aa17.97■□□□□ 0.47
SEC13-218ENST00000490283 SNX19Q92543 992 aa17.97■□□□□ 0.47
SEC13-218ENST00000490283 IGSF8Q969P0 613 aa17.97■□□□□ 0.47
SEC13-218ENST00000490283 MYO19Q96H55 970 aa17.97■□□□□ 0.47
SEC13-218ENST00000490283 MRGPRX3Q96LB0 322 aa17.97■□□□□ 0.47
SEC13-218ENST00000490283 C11orf70Q9BRQ4 267 aa17.97■□□□□ 0.47
SEC13-218ENST00000490283 RSPH9Q9H1X1 276 aaPredicted RBP17.97■□□□□ 0.47
SEC13-218ENST00000490283 SGK2Q9HBY8 427 aa17.97■□□□□ 0.47
SEC13-218ENST00000490283 VPS28Q9UK41 221 aa17.97■□□□□ 0.47
SEC13-218ENST00000490283 ITIH6Q6UXX5 1313 aa17.97■□□□□ 0.47
SEC13-218ENST00000490283 NUP205Q92621 2012 aa17.96■□□□□ 0.47
SEC13-218ENST00000490283 METTL12A8MUP2 240 aa17.96■□□□□ 0.47
SEC13-218ENST00000490283 TTC34A8MYJ7 566 aa17.96■□□□□ 0.47
SEC13-218ENST00000490283 CALB1P05937 261 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms